Miyakogusa Predicted Gene

Lj5g3v0422370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0422370.1 Non Chatacterized Hit- tr|F4I1X2|F4I1X2_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At1,42.96,8e-19,DUF2431,Domain of unknown function DUF2431;
SUBFAMILY NOT NAMED,NULL; PHENYLALANYL-TRNA
SYNTHETASE,N,gene.g58837.t1.1
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g08150.1                                                       311   3e-85
Glyma02g46360.1                                                       127   9e-30
Glyma19g04300.1                                                       108   7e-24
Glyma09g01890.2                                                       107   2e-23
Glyma09g01890.1                                                       106   2e-23
Glyma03g11640.1                                                        92   5e-19
Glyma01g07610.1                                                        88   1e-17
Glyma13g06720.1                                                        85   9e-17
Glyma07g10980.1                                                        78   9e-15

>Glyma18g08150.1 
          Length = 550

 Score =  311 bits (798), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 153/243 (62%), Positives = 176/243 (72%), Gaps = 32/243 (13%)

Query: 1   MRRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPF 60
           MRRFD+VIFNFPHAGFH KEDN+L+IK H+ LV GFFKNAS MLRANGE+HV+HKTT PF
Sbjct: 107 MRRFDQVIFNFPHAGFHGKEDNTLLIKKHKALVLGFFKNASGMLRANGEIHVSHKTTAPF 166

Query: 61  NTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKFIYNPKA 120
           N WNIEKLA Q FL LIEC+DFK+EDYPGYNNKRGDSYRCDEPFPLG C TFKFIYNPKA
Sbjct: 167 NNWNIEKLAAQCFLKLIECADFKREDYPGYNNKRGDSYRCDEPFPLGKCCTFKFIYNPKA 226

Query: 121 R------------------LAFQEIQDAVEQLPTPIGLHYYPQASHIQRMNEHTPISRDY 162
           +                  L  QEI+ AVEQLPT   L+YYPQ SH  ++ E T      
Sbjct: 227 KRQNHVKRNQMVVSRQQTCLPLQEIEVAVEQLPTSAHLNYYPQTSHFPKIEEVT------ 280

Query: 163 LNQGFNRISPSAAYHGHGINLGAQRSLQPMESLQSLQPWPASTNVRYSPTEHVGTM-NTV 221
                  ++PS  Y   G++LG  R+ QPME LQSLQPWP STNVRYS T++V T+ NTV
Sbjct: 281 -------VTPSGGYSAPGMSLGPTRTFQPMEPLQSLQPWPTSTNVRYSLTDYVRTIDNTV 333

Query: 222 PLT 224
           P++
Sbjct: 334 PIS 336


>Glyma02g46360.1 
          Length = 267

 Score =  127 bits (320), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 78/114 (68%), Gaps = 1/114 (0%)

Query: 2   RRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPFN 61
           + FDR++FNFPHAGF  +E +S  I++H+ +V GF K+A  M+  +GE+HV HK   PFN
Sbjct: 89  KYFDRIVFNFPHAGFVYREHDSCQIELHKHVVLGFLKSARQMVSQDGEIHVTHKNAHPFN 148

Query: 62  TWNIEKLAMQ-NFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
            W + KLA +   L L+E   F   +YPGY NKRG  +RCD+ FP+G CSTFKF
Sbjct: 149 NWKVVKLAEELAKLVLVERVPFYLFEYPGYINKRGSGHRCDQSFPVGDCSTFKF 202


>Glyma19g04300.1 
          Length = 181

 Score =  108 bits (269), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/113 (46%), Positives = 66/113 (58%), Gaps = 18/113 (15%)

Query: 2   RRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPFN 61
           R FD +IFNFPHAGF  +E +   I++H++LV GF  NA  ML   GE+H+ HKTT PF 
Sbjct: 81  RHFDYIIFNFPHAGFIARESDDYQIQLHKDLVSGFLYNAKYMLNKGGEIHITHKTTHPFK 140

Query: 62  TWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
                             ++F    YPGY NKRGD  +CD+ FP+G CSTF F
Sbjct: 141 ------------------AEFYPHLYPGYKNKRGDGLQCDQSFPIGECSTFMF 175


>Glyma09g01890.2 
          Length = 233

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 2   RRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRA-NGEVHVNHKTTTPF 60
           +RFDR+++NFPH GF   E++   I++++ L+ GF  NA  +++   GE+HV HK   P+
Sbjct: 117 QRFDRIVYNFPHVGFIYPENSHCQIQLNKRLLKGFLANAKALIKKEGGEIHVTHKEGDPY 176

Query: 61  NTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
           N W++ K   +  L L +   F K+DYPGY+NKR      D PFP+G  ST+KF
Sbjct: 177 NKWDLVKKPEKRGLVLQQVVPFFKDDYPGYDNKRAHGKLSDAPFPVGEASTYKF 230


>Glyma09g01890.1 
          Length = 240

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%)

Query: 2   RRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRA-NGEVHVNHKTTTPF 60
           +RFDR+++NFPH GF   E++   I++++ L+ GF  NA  +++   GE+HV HK   P+
Sbjct: 117 QRFDRIVYNFPHVGFIYPENSHCQIQLNKRLLKGFLANAKALIKKEGGEIHVTHKEGDPY 176

Query: 61  NTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
           N W++ K   +  L L +   F K+DYPGY+NKR      D PFP+G  ST+KF
Sbjct: 177 NKWDLVKKPEKRGLVLQQVVPFFKDDYPGYDNKRAHGKLSDAPFPVGEASTYKF 230


>Glyma03g11640.1 
          Length = 86

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 45/51 (88%)

Query: 71  QNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKFIYNPKAR 121
           Q FL+LIE +DFK+EDY GYNNKRGDSYRCDEPFP G C+TF FIYNPKA+
Sbjct: 1   QCFLSLIESADFKREDYLGYNNKRGDSYRCDEPFPRGKCNTFNFIYNPKAK 51


>Glyma01g07610.1 
          Length = 108

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 59/106 (55%), Gaps = 34/106 (32%)

Query: 1   MRRFDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPF 60
           + RFDRV+FNFPH  FH KE+N+L+I   ++    F+ +A C                  
Sbjct: 36  LWRFDRVMFNFPHVSFHGKENNTLLINHIQD----FYTDAQC------------------ 73

Query: 61  NTWNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPL 106
                       FL+LIE  DFK+EDY  YNNKRGD+YRCDEPFPL
Sbjct: 74  ------------FLSLIESVDFKREDYLSYNNKRGDNYRCDEPFPL 107


>Glyma13g06720.1 
          Length = 125

 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 10/103 (9%)

Query: 12  PHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVNHKTTTPFNTWNIEKLAMQ 71
           P+ G + + DN         LV  F  NA  ML   G++H+ HKT+ PF+  NI+KLA +
Sbjct: 17  PYRGINGRTDN---------LVSEFLYNAKYMLHKGGKIHITHKTSHPFSKKNIKKLAKR 67

Query: 72  NFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKF 114
             L L++ ++F    YPGY  KRGD  +CDE FP+G CSTF F
Sbjct: 68  QSLVLVK-AEFYPHLYPGYKIKRGDGLKCDESFPVGECSTFMF 109


>Glyma07g10980.1 
          Length = 148

 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 70/134 (52%), Gaps = 19/134 (14%)

Query: 4   FDRVIFNFPHAGFHRKEDNSLMIKMHRELVFGFFKNASCMLRANGEVHVN-HKTTTPFNT 62
           FDR+I+ F HA F           + RE+  GF KNA  ML ++GE+H   HKT   FN 
Sbjct: 1   FDRIIYTFLHASF-----------IGREMR-GFLKNAKHMLTSDGEIHFTYHKTMQSFNL 48

Query: 63  WNIEKLAMQNFLTLIECSDFKKEDYPGYNNKRGDSYRCDEPFPLGMCSTFKFI---YNPK 119
           WNI KLA +  L L+    F  + + GYN  +GD  + DE F +G  S F F    +N K
Sbjct: 49  WNITKLAQKEGLVLVREEKF--DQHQGYNIIKGDGSKRDETFYVGEMSIFMFACVKFNDK 106

Query: 120 ARLAFQEIQDAVEQ 133
            +    ++ D +E+
Sbjct: 107 IKKE-DKMSDGIEK 119