Miyakogusa Predicted Gene

Lj5g3v0404930.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0404930.2 tr|G7K4U8|G7K4U8_MEDTR Cytochrome c oxidase
assembly protein COX15-like protein OS=Medicago
truncatu,85.43,0,CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15,NULL;
seg,NULL; HemeA_synth_type2,Heme A synthase, type ,CUFF.52959.2
         (455 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g47340.1                                                       700   0.0  
Glyma14g01420.1                                                       693   0.0  
Glyma01g03250.1                                                       284   2e-76
Glyma03g22690.1                                                       157   3e-38

>Glyma02g47340.1 
          Length = 455

 Score =  700 bits (1806), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/459 (77%), Positives = 384/459 (83%), Gaps = 8/459 (1%)

Query: 1   MFGRGTAFSILKRSREAA--IHKLRGTTTRPFSHPSAQESFKFLSPSIASHGFRAFRSLP 58
           MFGRGT +S+L+R +EA    HKLRGT   PFS+ S+   FKFLSP +++H F AFRS  
Sbjct: 1   MFGRGTVWSVLRRGKEACGGFHKLRGT---PFSYSSSSTPFKFLSPPVSTHCFHAFRSQL 57

Query: 59  IPKGHHVSY--TRSFSKVVSAGAEHKEGLKLFVTGGAHAQKVVGIWLFGSAAWVFSMVXX 116
           IPKGHHV     R+FSK+VSA  + +EGLKL V+GG+ AQK+VGIWLFGSAAWVFSMV  
Sbjct: 58  IPKGHHVHVPQMRNFSKMVSA-EQKEEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMVVL 116

Query: 117 XXXXXXXXXXXXMTDWKFTGGLPPLSDEEWLQEFEKYKQSPEYKRVNKGMTIEEFKFIYW 176
                       MTDWKFTG LPP SDEEWLQEF+KYKQSPE+KRVN+GM IEEFKFIYW
Sbjct: 117 GGLTRLTRSGLSMTDWKFTGTLPPFSDEEWLQEFDKYKQSPEFKRVNRGMKIEEFKFIYW 176

Query: 177 MEYAHRMWGRALGVIFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLE 236
           MEYAHRMWGRALGV+FALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLE
Sbjct: 177 MEYAHRMWGRALGVMFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSGLE 236

Query: 237 EPPTEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESVTWVREAAKVRRLA 296
           EPP+EYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAES+TWVR AAKVRRLA
Sbjct: 237 EPPSEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLTWVRGAAKVRRLA 296

Query: 297 LPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTVQL 356
           LP+S+LVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIP DIFEMKPLIRNFFENT+TVQL
Sbjct: 297 LPISILVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPGDIFEMKPLIRNFFENTATVQL 356

Query: 357 DHRILATATLISVGALWGATRKLDIHPAVRSLIGSIVGMAALQVTLGVSTLLSYVPVSLG 416
           DHRILATATLISV  LW +TRKL+IHPAVRS+IG  VGMA LQVTLG+STLLSYVPVSLG
Sbjct: 357 DHRILATATLISVSILWWSTRKLEIHPAVRSVIGGAVGMATLQVTLGISTLLSYVPVSLG 416

Query: 417 TAHQAGAXXXXXXXXXXNHTVRXXXXXXXXXXXQVVKAN 455
           TAHQAGA          NHTVR           QV KA+
Sbjct: 417 TAHQAGALTLLTFMLLLNHTVRRPSLSLLKSLPQVGKAH 455


>Glyma14g01420.1 
          Length = 456

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/461 (77%), Positives = 382/461 (82%), Gaps = 11/461 (2%)

Query: 1   MFGRGTAFSILKRSREAA-IHKL--RGTTTRPFSHPSAQES-FKFLSPSIASHGFRAFRS 56
           MFGRG  +S+ KR +EA  IHKL  RGT   PFS  S Q   FKFL+P +A+H   AFRS
Sbjct: 1   MFGRGMVWSVWKRGKEACKIHKLCLRGT---PFSSSSTQPPPFKFLTPPVATHYIHAFRS 57

Query: 57  LPIPKGHHV--SYTRSFSKVVSAGAEHKEGLKLFVTGGAHAQKVVGIWLFGSAAWVFSMV 114
              PKGHHV     R+FSK+VSA  E KEGLKL V+GG+ AQK+VGIWLFGSAAWVFSMV
Sbjct: 58  QLFPKGHHVHVPQMRNFSKMVSA--EQKEGLKLLVSGGSRAQKLVGIWLFGSAAWVFSMV 115

Query: 115 XXXXXXXXXXXXXXMTDWKFTGGLPPLSDEEWLQEFEKYKQSPEYKRVNKGMTIEEFKFI 174
                         MTDWKFTG LPP SD+EWLQEF+KYKQSPEYKRVN+GM IEEFKFI
Sbjct: 116 VLGGLTRLTRSGLSMTDWKFTGTLPPFSDDEWLQEFDKYKQSPEYKRVNRGMKIEEFKFI 175

Query: 175 YWMEYAHRMWGRALGVIFALPYSYFLHKGYITLRLGLRLSALFALGAGQGLIGWWMVKSG 234
           YWMEYAHRMWGRALGV+FALPYSYFLHK YITLRLGLRLSALFALGAGQGLIGWWMVKSG
Sbjct: 176 YWMEYAHRMWGRALGVMFALPYSYFLHKRYITLRLGLRLSALFALGAGQGLIGWWMVKSG 235

Query: 235 LEEPPTEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESVTWVREAAKVRR 294
           LEEPP+EYSQPRVS YRLAAHLTSAFAIYCGLFWTALSVVMPEPPAES+TWVR AAKVRR
Sbjct: 236 LEEPPSEYSQPRVSSYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLTWVRGAAKVRR 295

Query: 295 LALPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTV 354
           LALP+S+LVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTV
Sbjct: 296 LALPISVLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTV 355

Query: 355 QLDHRILATATLISVGALWGATRKLDIHPAVRSLIGSIVGMAALQVTLGVSTLLSYVPVS 414
           QLDHRILATATLISVG LW +TRKL+IHPAVRS+IG  VGMAALQVTLG+STLLSYVPVS
Sbjct: 356 QLDHRILATATLISVGILWWSTRKLEIHPAVRSVIGGAVGMAALQVTLGISTLLSYVPVS 415

Query: 415 LGTAHQAGAXXXXXXXXXXNHTVRXXXXXXXXXXXQVVKAN 455
           LGTAHQAGA          NHTVR           QVVKA+
Sbjct: 416 LGTAHQAGALTLLTFMLLLNHTVRRPSLSLLKSLPQVVKAH 456


>Glyma01g03250.1 
          Length = 266

 Score =  284 bits (726), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/327 (53%), Positives = 200/327 (61%), Gaps = 70/327 (21%)

Query: 82  KEGLKLFVTGGAHAQKVVGIWLFGSAAWVFSMVXXXXXXXXXXXXXXMTDWKFTGGLPPL 141
           K+GLKL + G   A+K+VG W FG AAWVFSMV              +TDWKF   L P 
Sbjct: 1   KKGLKLLMNG-VRAKKLVGKWSFGLAAWVFSMVVLG-----------VTDWKFINTLYPF 48

Query: 142 SDEEWLQEFEKYKQSPEYKRVNKGMTIEEFKFIYWMEYAHRMWGRALGVIFALPYSYFLH 201
           SDEE LQEF+KYKQSPE KRVNKGM IEEFKFIYWMEYAHRM GRALG            
Sbjct: 49  SDEECLQEFDKYKQSPENKRVNKGMKIEEFKFIYWMEYAHRMGGRALG------------ 96

Query: 202 KGYITLRLGLRLSALFAL-GAGQG---LIG---WWMVKSGLEEPPTEYSQPRVSPYRLAA 254
            GYI+L L LRL A+FAL G   G   L+G   W+ VK  L  PP      RV+PYRLA 
Sbjct: 97  -GYISLTLVLRLFAMFALAGCWAGSHRLVGGQKWFRVK--LTCPP------RVTPYRLAT 147

Query: 255 HLTSAFAIYCGLFWTALSVVMPEPPAESVTWVREAAKVRRLALPVSLLVGLTAVSGAFVA 314
           HLTS+F IYC LFW  L  VMP+PP ES+TWVR AAKVRRLAL +S+LVGLT V GAFV 
Sbjct: 148 HLTSSFVIYCCLFWITLMFVMPKPPVESLTWVRGAAKVRRLALTISILVGLTTVPGAFVT 207

Query: 315 GND-AGHAFNTFPKMGDTWIPEDIFEMKPLIRNFFENTSTVQLDHRILATATLISVGALW 373
           GND   HAFNTFP M         FE+   ++  + N               LISV    
Sbjct: 208 GNDVVWHAFNTFPNMASD------FEISLRMQQLYIN--------------ILISV---- 243

Query: 374 GATRKLDIHPAVRSLIGSIVGMAALQV 400
                L+IHP VR +IG +VGM+ALQV
Sbjct: 244 -----LEIHPVVRFVIGGVVGMSALQV 265


>Glyma03g22690.1 
          Length = 107

 Score =  157 bits (396), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 74/92 (80%), Positives = 80/92 (86%)

Query: 129 MTDWKFTGGLPPLSDEEWLQEFEKYKQSPEYKRVNKGMTIEEFKFIYWMEYAHRMWGRAL 188
           MT WKF   LP LS+EEWLQ+F+K KQSPEY RVNKGM IEEFKFIYWM+YAH MWGRAL
Sbjct: 1   MTIWKFIDTLPLLSNEEWLQKFDKNKQSPEYTRVNKGMKIEEFKFIYWMKYAHCMWGRAL 60

Query: 189 GVIFALPYSYFLHKGYITLRLGLRLSALFALG 220
           GV+F+LPYSYFLH GYITLRLGLRL ALFAL 
Sbjct: 61  GVMFSLPYSYFLHTGYITLRLGLRLFALFALA 92