Miyakogusa Predicted Gene

Lj5g3v0380130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0380130.1 tr|A9PFA7|A9PFA7_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_823661 PE=2
SV=1,55.56,5e-19,POLLEN SPECIFIC PROTEIN SF21,Pollen specific protein
SF21; N-MYC DOWNSTREAM REGULATED,Ndr; Ndr,Ndr,CUFF.52899.1
         (79 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g05420.1                                                       140   2e-34
Glyma17g34820.1                                                       139   5e-34
Glyma14g10720.1                                                       139   6e-34
Glyma14g10720.2                                                       139   7e-34
Glyma04g05350.1                                                       139   7e-34
Glyma05g36270.1                                                       129   5e-31
Glyma08g03360.1                                                       129   7e-31
Glyma07g15420.1                                                       124   3e-29
Glyma20g36650.1                                                        87   5e-18
Glyma10g30270.1                                                        79   9e-16
Glyma10g30270.2                                                        77   5e-15
Glyma14g34420.1                                                        76   9e-15
Glyma01g00660.1                                                        57   3e-09

>Glyma06g05420.1 
          Length = 344

 Score =  140 bits (354), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 68/75 (90%), Positives = 73/75 (97%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYFLMGYGLYR SK+SVSPRSPLSPSCISPELYSPESM
Sbjct: 270 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSKLSVSPRSPLSPSCISPELYSPESM 329

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTRIS+EI
Sbjct: 330 GLKLKPIKTRISVEI 344


>Glyma17g34820.1 
          Length = 349

 Score =  139 bits (351), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 67/75 (89%), Positives = 73/75 (97%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYFLMGYGLY+ SK+SVSPRSPLSPSCISPELYSPESM
Sbjct: 275 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESM 334

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTRIS+EI
Sbjct: 335 GLKLKPIKTRISLEI 349


>Glyma14g10720.1 
          Length = 349

 Score =  139 bits (350), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 67/75 (89%), Positives = 73/75 (97%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYFLMGYGLY+ SK+SVSPRSPLSPSCISPELYSPESM
Sbjct: 275 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESM 334

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTRIS+EI
Sbjct: 335 GLKLKPIKTRISLEI 349


>Glyma14g10720.2 
          Length = 300

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 67/75 (89%), Positives = 73/75 (97%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYFLMGYGLY+ SK+SVSPRSPLSPSCISPELYSPESM
Sbjct: 226 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYKPSKLSVSPRSPLSPSCISPELYSPESM 285

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTRIS+EI
Sbjct: 286 GLKLKPIKTRISLEI 300


>Glyma04g05350.1 
          Length = 344

 Score =  139 bits (350), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 68/75 (90%), Positives = 72/75 (96%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYFLMGYGLYR SK+SVSPRSPLSPSCISPELYSPESM
Sbjct: 270 VEVQACGSMVTEEQPHAMLIPMEYFLMGYGLYRPSKLSVSPRSPLSPSCISPELYSPESM 329

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTRIS EI
Sbjct: 330 GLKLKPIKTRISEEI 344


>Glyma05g36270.1 
          Length = 352

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 69/75 (92%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYF MGYGLYR ++ S SPRSPLSPSCISPEL SPESM
Sbjct: 278 VEVQACGSMVTEEQPHAMLIPMEYFFMGYGLYRPTQFSDSPRSPLSPSCISPELLSPESM 337

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTR+S+++
Sbjct: 338 GLKLKPIKTRVSLQV 352


>Glyma08g03360.1 
          Length = 336

 Score =  129 bits (324), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 69/75 (92%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAMLIP+EYF MGYGLYR ++ S SPRSPLSPSCISPEL SPESM
Sbjct: 262 VEVQACGSMVTEEQPHAMLIPMEYFFMGYGLYRPTQFSDSPRSPLSPSCISPELLSPESM 321

Query: 65  GLKLKPIKTRISMEI 79
           GLKLKPIKTR+S+++
Sbjct: 322 GLKLKPIKTRVSLQV 336


>Glyma07g15420.1 
          Length = 342

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 64/71 (90%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPELYSPESM 64
           ++VQ CGSMVTEEQPHAML+P+EYFLMGYGLYR    S SPRSPLSPSCISPEL SPESM
Sbjct: 270 VEVQGCGSMVTEEQPHAMLVPMEYFLMGYGLYRPCHFSDSPRSPLSPSCISPELLSPESM 329

Query: 65  GLKLKPIKTRI 75
           GLKLKPIKTR+
Sbjct: 330 GLKLKPIKTRV 340


>Glyma20g36650.1 
          Length = 353

 Score = 86.7 bits (213), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 41/81 (50%), Positives = 60/81 (74%), Gaps = 6/81 (7%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRS------PLSPSCISPEL 58
           ++VQ CGS+VTEE P++M+ P+E FLMG+G +R +  + S  +      P S SCI+PEL
Sbjct: 273 VEVQACGSLVTEEHPNSMITPLERFLMGFGYHRQTHAASSSSNGSNPASPTSHSCIAPEL 332

Query: 59  YSPESMGLKLKPIKTRISMEI 79
            SPES+G+KLKPI+TR+ ++I
Sbjct: 333 LSPESLGIKLKPIRTRVDVQI 353


>Glyma10g30270.1 
          Length = 354

 Score = 79.0 bits (193), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 7/82 (8%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSK------MSVSPRSPLSP-SCISPE 57
           ++VQ CGS+VTEE P++M+ P+E FLMG+G +R +          +P SP S  SCI+PE
Sbjct: 273 VEVQACGSLVTEEHPNSMISPLEGFLMGFGYHRQTHAASSSSNCSNPASPTSHYSCIAPE 332

Query: 58  LYSPESMGLKLKPIKTRISMEI 79
           L SPES+G+KLKPI+TR+ ++ 
Sbjct: 333 LLSPESLGIKLKPIRTRVDVQF 354


>Glyma10g30270.2 
          Length = 352

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 7/80 (8%)

Query: 7   VQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSK------MSVSPRSPLSP-SCISPELY 59
           V+ CGS+VTEE P++M+ P+E FLMG+G +R +          +P SP S  SCI+PEL 
Sbjct: 273 VEACGSLVTEEHPNSMISPLEGFLMGFGYHRQTHAASSSSNCSNPASPTSHYSCIAPELL 332

Query: 60  SPESMGLKLKPIKTRISMEI 79
           SPES+G+KLKPI+TR+ ++ 
Sbjct: 333 SPESLGIKLKPIRTRVDVQF 352


>Glyma14g34420.1 
          Length = 129

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 37/39 (94%), Positives = 39/39 (100%)

Query: 41  MSVSPRSPLSPSCISPELYSPESMGLKLKPIKTRISMEI 79
           +SVSPRSPLSPSCISPELYSPES+GLKLKPIKTRISMEI
Sbjct: 91  LSVSPRSPLSPSCISPELYSPESIGLKLKPIKTRISMEI 129


>Glyma01g00660.1 
          Length = 275

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 17/53 (32%)

Query: 5   LQVQECGSMVTEEQPHAMLIPIEYFLMGYGLYRSSKMSVSPRSPLSPSCISPE 57
           ++VQ CGSMVTEEQPHAML+P++                 PR+PLSPSCISPE
Sbjct: 238 VEVQGCGSMVTEEQPHAMLVPMD-----------------PRNPLSPSCISPE 273