Miyakogusa Predicted Gene

Lj5g3v0380100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0380100.1 tr|Q2HTC4|Q2HTC4_MEDTR Conserved oligomeric Golgi
complex component 4, related OS=Medicago
truncatul,84.63,0,COG4,Conserved oligomeric Golgi complex, subunit 4;
coiled-coil,NULL; COG4 transport protein,Conserv,CUFF.52896.1
         (449 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g42200.1                                                       751   0.0  
Glyma19g44940.1                                                       751   0.0  

>Glyma03g42200.1 
          Length = 744

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/445 (82%), Positives = 401/445 (90%), Gaps = 3/445 (0%)

Query: 5   MGSTPRGNGSEEDITGNGGAVTSSIDFGKAEAVEYVRSLTDVGAMTRLLHECIAHQRALD 64
           MG+ P  NG+  D   NG +V  SIDFG AEAV+YVRSLTDVGAMTRLLHECIAHQRA+D
Sbjct: 2   MGAIPEANGNVAD-EENGSSVGGSIDFGTAEAVQYVRSLTDVGAMTRLLHECIAHQRAVD 60

Query: 65  TQLDDLLSQRADLDRHLVQLQRSSDVLDIVKSDSDHMLSNVSSTSDLADSVSRKVRELDL 124
            +LD+LLSQR DLDRHL+QLQRSSDVLDIV SD+D+MLSNV+STSDLAD VSRKVRELDL
Sbjct: 61  VELDELLSQRTDLDRHLLQLQRSSDVLDIVNSDADYMLSNVASTSDLADQVSRKVRELDL 120

Query: 125 AQSRVRSTLHRIDAVVERGNCLDGGLRALDEEDYESAARYVQTFLQIDAQFKDSGSDQIQ 184
           AQSRVR+TL RIDA+VER N L+G  RAL+ EDYESAA YVQTFLQIDAQ+KDSGSDQ+Q
Sbjct: 121 AQSRVRNTLLRIDAIVERANSLEGVHRALEAEDYESAACYVQTFLQIDAQYKDSGSDQLQ 180

Query: 185 RERLMTAKKQLEGIVRKKLSSAVDQRDHNAILRFVRLYTPLGLEEEGLQVYVGYLKKVIG 244
           R+RL+ AKKQLEGIVRKKLS+AVDQRDH AILRF+RL+TPLG+EEEGLQVYVGYLKKVI 
Sbjct: 181 RDRLLAAKKQLEGIVRKKLSAAVDQRDHPAILRFIRLFTPLGVEEEGLQVYVGYLKKVIA 240

Query: 245 MRSRMEFEQLVESMEHSNSNVNFVSCLTSLFKDIVLAIEENSEILSGLCGEDGIVYAICE 304
           MRSRMEFEQLVE M+    NVNFV CLT+LFKDIVLAIEENSEILSGLCGEDGIVYAICE
Sbjct: 241 MRSRMEFEQLVEMMDQ--QNVNFVGCLTNLFKDIVLAIEENSEILSGLCGEDGIVYAICE 298

Query: 305 LQEECDSRGSVILNKYMEYRKLSKLSSEINARNNTMLAVGGGTEGPDPREVEMYLEEILQ 364
           LQEECDSRGSVILNKYMEYR+L+KLSSEINA N  +LAVGGG EGPDPREVE+YLEEIL 
Sbjct: 299 LQEECDSRGSVILNKYMEYRQLAKLSSEINAHNTNLLAVGGGPEGPDPREVELYLEEILN 358

Query: 365 LMQLGEDYTEFMVSKIRGLASVDPELLPRATKAFRSGSFSKVVQDVTGFYVILEGFFMVE 424
           LMQLGEDYTEFM+SKI+ L SVDPELLPRATKAFRSGSFSKV QD+TGFYVILEGFFMVE
Sbjct: 359 LMQLGEDYTEFMISKIKALTSVDPELLPRATKAFRSGSFSKVAQDLTGFYVILEGFFMVE 418

Query: 425 NVRKAIGIDELVPHSLTTSMVDDGF 449
           NVRKAI IDE VP SLTTSMVDD F
Sbjct: 419 NVRKAIKIDEQVPDSLTTSMVDDVF 443


>Glyma19g44940.1 
          Length = 743

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/445 (82%), Positives = 401/445 (90%), Gaps = 3/445 (0%)

Query: 5   MGSTPRGNGSEEDITGNGGAVTSSIDFGKAEAVEYVRSLTDVGAMTRLLHECIAHQRALD 64
           MG+TP  NG+  D   NG  V  SIDFG AEAVEYVRSLTDVGAMTRLLHECIAHQRA+D
Sbjct: 1   MGATPEANGNVAD-EENGSNVCGSIDFGTAEAVEYVRSLTDVGAMTRLLHECIAHQRAVD 59

Query: 65  TQLDDLLSQRADLDRHLVQLQRSSDVLDIVKSDSDHMLSNVSSTSDLADSVSRKVRELDL 124
            +LD+LLSQR DLDRHL+QLQRSSDVLDIV SD+D+MLSNV+STSDLAD VSRKVRELDL
Sbjct: 60  VELDELLSQRTDLDRHLLQLQRSSDVLDIVNSDADYMLSNVASTSDLADQVSRKVRELDL 119

Query: 125 AQSRVRSTLHRIDAVVERGNCLDGGLRALDEEDYESAARYVQTFLQIDAQFKDSGSDQIQ 184
           AQSRVR+TL RIDA+VER N L+G  RAL+ EDYESAA YVQTFLQIDAQ+KDSGSDQ+Q
Sbjct: 120 AQSRVRNTLLRIDAIVERANSLEGVHRALEAEDYESAALYVQTFLQIDAQYKDSGSDQLQ 179

Query: 185 RERLMTAKKQLEGIVRKKLSSAVDQRDHNAILRFVRLYTPLGLEEEGLQVYVGYLKKVIG 244
           R+RL+ AKKQLEGIVRKKLS+AVDQRDH AILRF+RL+TPLG+EEEGLQVYVGYLKKV+ 
Sbjct: 180 RDRLLAAKKQLEGIVRKKLSAAVDQRDHPAILRFIRLFTPLGVEEEGLQVYVGYLKKVVA 239

Query: 245 MRSRMEFEQLVESMEHSNSNVNFVSCLTSLFKDIVLAIEENSEILSGLCGEDGIVYAICE 304
           MRSRMEFEQLVE M+    NVNFV CLT+LFKDIVLAIEENSEILSGLCGEDGIVYAICE
Sbjct: 240 MRSRMEFEQLVEMMDQ--QNVNFVRCLTNLFKDIVLAIEENSEILSGLCGEDGIVYAICE 297

Query: 305 LQEECDSRGSVILNKYMEYRKLSKLSSEINARNNTMLAVGGGTEGPDPREVEMYLEEILQ 364
           LQEECDSRGSVILNKYMEYR+L+KLSSEINA N  +LAVGGG EGPDPREVE+YLEEIL 
Sbjct: 298 LQEECDSRGSVILNKYMEYRQLAKLSSEINAHNTNLLAVGGGPEGPDPREVELYLEEILS 357

Query: 365 LMQLGEDYTEFMVSKIRGLASVDPELLPRATKAFRSGSFSKVVQDVTGFYVILEGFFMVE 424
           LMQLGEDYTEFM+SKI+ L SVDPELLPRATKAFRSGSFSKV QD+TGFYVILEGFFMVE
Sbjct: 358 LMQLGEDYTEFMISKIKALTSVDPELLPRATKAFRSGSFSKVAQDLTGFYVILEGFFMVE 417

Query: 425 NVRKAIGIDELVPHSLTTSMVDDGF 449
           NVRKAI IDE +P SLT+SMVDD F
Sbjct: 418 NVRKAIKIDEHMPDSLTSSMVDDVF 442