Miyakogusa Predicted Gene
- Lj5g3v0380030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0380030.1 tr|F2DS31|F2DS31_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,33.73,3e-18,seg,NULL;
BACTERIOCHLOROPHYLL SYNTHASE,NULL; PRENYLTRANSFERASES,NULL; UbiA,UbiA
prenyltransferase fa,CUFF.52894.1
(245 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g15720.1 323 1e-88
Glyma02g26820.1 319 2e-87
Glyma02g26820.2 204 5e-53
Glyma01g07560.1 87 2e-17
Glyma13g00850.3 83 3e-16
Glyma13g00850.2 83 3e-16
Glyma13g00850.1 83 3e-16
Glyma17g06940.1 82 6e-16
Glyma10g44170.1 62 8e-10
Glyma10g44170.2 61 9e-10
Glyma10g08120.1 52 8e-07
Glyma10g08150.1 52 8e-07
Glyma03g03910.1 51 9e-07
Glyma20g38930.2 49 4e-06
Glyma20g38930.1 49 4e-06
Glyma13g21920.1 49 6e-06
>Glyma09g15720.1
Length = 355
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/251 (69%), Positives = 185/251 (73%), Gaps = 12/251 (4%)
Query: 3 MELSSSPTPLRLHPIIPTWN--SLHSVKLPTNPNSSRFILAGFSNHLTS------TRRSC 54
MELS SPT R+ IPT N L S K T S+ + GFS H S + R C
Sbjct: 1 MELSLSPTSHRVPSTIPTLNFAKLSSTKATT----SQPLFLGFSKHFNSIGLNHHSYRCC 56
Query: 55 CNPVPKRHKIPISIRASTEVGAAGSDRPFGNKVLDLKDACWRFLRPHTIRGTALGSFALV 114
N VPKR + P SIRA T VGAAGSDRP ++LDLKDACWRFLRPHTIRGTALGSFALV
Sbjct: 57 SNAVPKRPQRPSSIRACTGVGAAGSDRPLAERLLDLKDACWRFLRPHTIRGTALGSFALV 116
Query: 115 ARALVENSNLIKWSLVFKALSGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS 174
ARAL+EN+NLIKWSL+FKA SGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS
Sbjct: 117 ARALIENTNLIKWSLLFKAFSGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS 176
Query: 175 VSSAWLLVIFFAAAGLLIVGLNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIA 234
V SAW LVIFFAAAGL I GLNFGP VPP RMKRFPVAAFLIIA
Sbjct: 177 VQSAWFLVIFFAAAGLSIAGLNFGPFIFSLYTLGLFLGTIYSVPPLRMKRFPVAAFLIIA 236
Query: 235 TVRGFLPNFGV 245
TVRGFL NFGV
Sbjct: 237 TVRGFLLNFGV 247
>Glyma02g26820.1
Length = 389
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/251 (68%), Positives = 184/251 (73%), Gaps = 11/251 (4%)
Query: 3 MELSSSPTPLRLHPIIPTWNS--LHSVKLPTNPNSSRFILAGFSNHLTS------TRRSC 54
MELS SPT R+ IPT NS L S K S + + FS H S + R C
Sbjct: 1 MELSLSPTSHRVPSTIPTLNSAKLSSTK---ATKSQQPLFLRFSKHFNSIGLHHHSHRCC 57
Query: 55 CNPVPKRHKIPISIRASTEVGAAGSDRPFGNKVLDLKDACWRFLRPHTIRGTALGSFALV 114
N VP+R + P SIRA T VGA+GSDRP ++LDLKDACWRFLRPHTIRGTALGSFALV
Sbjct: 58 SNAVPERPQRPSSIRACTGVGASGSDRPLAERLLDLKDACWRFLRPHTIRGTALGSFALV 117
Query: 115 ARALVENSNLIKWSLVFKALSGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS 174
ARAL+EN+NLIKWSL FKA GLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS
Sbjct: 118 ARALIENTNLIKWSLFFKAFCGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS 177
Query: 175 VSSAWLLVIFFAAAGLLIVGLNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIA 234
V SAW LVIFFAAAGL IVGLNFGP VPPFRMKRFPVAAFLIIA
Sbjct: 178 VQSAWFLVIFFAAAGLSIVGLNFGPFIFSLYTLGLFLGTIYSVPPFRMKRFPVAAFLIIA 237
Query: 235 TVRGFLPNFGV 245
TVRGFL NFGV
Sbjct: 238 TVRGFLLNFGV 248
>Glyma02g26820.2
Length = 340
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 137/251 (54%), Gaps = 60/251 (23%)
Query: 3 MELSSSPTPLRLHPIIPTWNS--LHSVKLPTNPNSSRFILAGFSNHLTS------TRRSC 54
MELS SPT R+ IPT NS L S K S + + FS H S + R C
Sbjct: 1 MELSLSPTSHRVPSTIPTLNSAKLSSTK---ATKSQQPLFLRFSKHFNSIGLHHHSHRCC 57
Query: 55 CNPVPKRHKIPISIRASTEVGAAGSDRPFGNKVLDLKDACWRFLRPHTIRGTALGSFALV 114
N VP+R + P SIRA T VGA+GSDRP ++LDLKDACWRFLRPHTIRGTALGS
Sbjct: 58 SNAVPERPQRPSSIRACTGVGASGSDRPLAERLLDLKDACWRFLRPHTIRGTALGSL--- 114
Query: 115 ARALVENSNLIKWSLVFKALSGLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLS 174
VNKPYLPIAAGDLS
Sbjct: 115 ----------------------------------------------VNKPYLPIAAGDLS 128
Query: 175 VSSAWLLVIFFAAAGLLIVGLNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIA 234
V SAW LVIFFAAAGL IVGLNFGP VPPFRMKRFPVAAFLIIA
Sbjct: 129 VQSAWFLVIFFAAAGLSIVGLNFGPFIFSLYTLGLFLGTIYSVPPFRMKRFPVAAFLIIA 188
Query: 235 TVRGFLPNFGV 245
TVRGFL NFGV
Sbjct: 189 TVRGFLLNFGV 199
>Glyma01g07560.1
Length = 235
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 47/77 (61%)
Query: 160 KVNKPYLPIAAGDLSVSSAWLLVIFFAAAGLLIVGLNFGPXXXXXXXXXXXXXXXXXVPP 219
K NKPYLPIA GDLSV SA LVIF A GL IVGLNFGP +PP
Sbjct: 62 KANKPYLPIATGDLSVQSARFLVIFVAVVGLSIVGLNFGPFIFSLYILDLFLSTIYYIPP 121
Query: 220 FRMKRFPVAAFLIIATV 236
FRMK FP FLIIATV
Sbjct: 122 FRMKHFPTTTFLIIATV 138
>Glyma13g00850.3
Length = 264
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLTSTRRSCCNPVPKRHKIPISIRASTEVGAAGSDRP 82
S H+ K+ N RF ++H S C K+ I ++A++E +
Sbjct: 29 SWHNRKIQKEYNFLRFRWPSLNHHYKSIEGGC---TCKKCNIKFVVKATSEKSFESEPQA 85
Query: 83 FG-----NKVLDLKDACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALSGL 137
F + V + DA +RF RPHT+ GTAL S V+ VE + I L +
Sbjct: 86 FDPKSILDSVKNSLDAFYRFSRPHTVIGTAL-SIISVSLLAVEKISDISPLFFTGVLEAV 144
Query: 138 FALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGL---LIVG 194
A + N YIVG+NQ+ D+ IDK+NKPYLP+A+G+ S + +V F+ +VG
Sbjct: 145 VAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFETGVTIVASFSILSFWLGWVVG 204
Query: 195 LNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRG 238
++ VP R KRF V A + I VR
Sbjct: 205 -SWPLFWALFVSFVLGTAYSINVPLLRWKRFAVLAAMCILAVRA 247
>Glyma13g00850.2
Length = 320
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLTSTRRSCCNPVPKRHKIPISIRASTEVGAAGSDRP 82
S H+ K+ N RF ++H S C K+ I ++A++E +
Sbjct: 29 SWHNRKIQKEYNFLRFRWPSLNHHYKSIEGGC---TCKKCNIKFVVKATSEKSFESEPQA 85
Query: 83 FGNK-----VLDLKDACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALSGL 137
F K V + DA +RF RPHT+ GTAL S V+ VE + I L +
Sbjct: 86 FDPKSILDSVKNSLDAFYRFSRPHTVIGTAL-SIISVSLLAVEKISDISPLFFTGVLEAV 144
Query: 138 FALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGL---LIVG 194
A + N YIVG+NQ+ D+ IDK+NKPYLP+A+G+ S + +V F+ +VG
Sbjct: 145 VAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFETGVTIVASFSILSFWLGWVVG 204
Query: 195 LNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRG 238
++ VP R KRF V A + I VR
Sbjct: 205 -SWPLFWALFVSFVLGTAYSINVPLLRWKRFAVLAAMCILAVRA 247
>Glyma13g00850.1
Length = 395
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 13/224 (5%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLTSTRRSCCNPVPKRHKIPISIRASTEVGAAGSDRP 82
S H+ K+ N RF ++H S C K+ I ++A++E +
Sbjct: 29 SWHNRKIQKEYNFLRFRWPSLNHHYKSIEGGC---TCKKCNIKFVVKATSEKSFESEPQA 85
Query: 83 FGNK-VLD-LK---DACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALSGL 137
F K +LD +K DA +RF RPHT+ GTAL S V+ VE + I L +
Sbjct: 86 FDPKSILDSVKNSLDAFYRFSRPHTVIGTAL-SIISVSLLAVEKISDISPLFFTGVLEAV 144
Query: 138 FALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGL---LIVG 194
A + N YIVG+NQ+ D+ IDK+NKPYLP+A+G+ S + +V F+ +VG
Sbjct: 145 VAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFETGVTIVASFSILSFWLGWVVG 204
Query: 195 LNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRG 238
++ VP R KRF V A + I VR
Sbjct: 205 -SWPLFWALFVSFVLGTAYSINVPLLRWKRFAVLAAMCILAVRA 247
>Glyma17g06940.1
Length = 411
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 101/224 (45%), Gaps = 13/224 (5%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLTSTRRSCCNPVPKRHKIPISIRASTEVGAAGSDRP 82
S H+ K+ N RF ++H +C K+ I ++A++E +
Sbjct: 45 SWHNRKIQKEYNFLRFRWPSLNHHYKGIEGAC---TCKKCNIKFVVKATSEKSLESEPQA 101
Query: 83 FGNK-----VLDLKDACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALSGL 137
F K V + DA +RF RPHT+ GTAL S V+ VE + I L +
Sbjct: 102 FDPKSILDSVKNSLDAFYRFSRPHTVIGTAL-SIISVSLLAVEKISDISPLFFTGVLEAV 160
Query: 138 FALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGL---LIVG 194
A + N YIVG+NQ+ D+ IDK+NKPYLP+A+G+ S + +V F+ +VG
Sbjct: 161 VAALFMNIYIVGLNQLSDVEIDKINKPYLPLASGEYSFETGVTIVASFSILSFWLGWVVG 220
Query: 195 LNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRG 238
++ VP R KRF V A + I VR
Sbjct: 221 -SWPLFWALFVSFVLGTAYSINVPLLRWKRFAVLAAMCILAVRA 263
>Glyma10g44170.1
Length = 432
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 16/229 (6%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLT-----STRRSCCNP--VPKRHKIPISIRASTEVG 75
S H + N RF +H ST + C V K P+ A
Sbjct: 43 SRHKRETQIEHNVLRFQQPSLDHHYKCIRGGSTYQECNRKFVVKAISKQPLGFEAH---- 98
Query: 76 AAGSDRPFGNKVLDLKDACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALS 135
A + + + V ++ A + F P+T+ G L +F+ A VE + I S + L
Sbjct: 99 -ASNPKNILDSVKNVLSAFYWFSYPYTMIGITLCAFSSSLLA-VEKLSDISLSFLIGVLQ 156
Query: 136 GLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAA--GLLIV 193
G+ + Y+ G+NQ+YD+ IDK+NKP+LP+A+G S + ++ F A G +
Sbjct: 157 GVLPQLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWI 216
Query: 194 GLNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFP-VAAFLIIATVRGFLP 241
++ VP R KR+P VAA +I+T LP
Sbjct: 217 TGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALP 265
>Glyma10g44170.2
Length = 409
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 16/229 (6%)
Query: 23 SLHSVKLPTNPNSSRFILAGFSNHLT-----STRRSCCNP--VPKRHKIPISIRASTEVG 75
S H + N RF +H ST + C V K P+ A
Sbjct: 43 SRHKRETQIEHNVLRFQQPSLDHHYKCIRGGSTYQECNRKFVVKAISKQPLGFEAH---- 98
Query: 76 AAGSDRPFGNKVLDLKDACWRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALS 135
A + + + V ++ A + F P+T+ G L +F+ A VE + I S + L
Sbjct: 99 -ASNPKNILDSVKNVLSAFYWFSYPYTMIGITLCAFSSSLLA-VEKLSDISLSFLIGVLQ 156
Query: 136 GLFALICGNGYIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAA--GLLIV 193
G+ + Y+ G+NQ+YD+ IDK+NKP+LP+A+G S + ++ F A G +
Sbjct: 157 GVLPQLFIEIYLCGVNQLYDLEIDKINKPHLPMASGQFSFKTGVIISAAFLALSFGFTWI 216
Query: 194 GLNFGPXXXXXXXXXXXXXXXXXVPPFRMKRFP-VAAFLIIATVRGFLP 241
++ VP R KR+P VAA +I+T LP
Sbjct: 217 TGSWPLICNLVVIASSWTAYSIDVPLLRWKRYPFVAAMCMISTWALALP 265
>Glyma10g08120.1
Length = 365
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 93 ACWRFLRPHTIRGTALGSFA---LVARALVENSNLIKWSLVFKALSGLFALICGNGYIVG 149
A + F PH++ G L + + L L + S L L+ + F I Y+ G
Sbjct: 117 ALYWFCNPHSMIGRTLSATSGCLLAVEKLSDISPLFFIGLLQVLVPNFFMDI----YVNG 172
Query: 150 INQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGL---LIVGLNFGPXXXXXXX 206
+NQ++D+ IDK+NKP+LP+ +G+LS+++A +V A LI+G ++
Sbjct: 173 VNQLFDLEIDKINKPFLPLVSGNLSITNAVFIVASSAILSFWLSLIIG-SWSLIWNVALC 231
Query: 207 XXXXXXXXXXVPPFRMKRFPVAAFLII 233
VP R KR PV +I+
Sbjct: 232 FLLWTAYSVNVPLLRWKRSPVLTAMIM 258
>Glyma10g08150.1
Length = 317
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 95 WRFLRPHTIRGTALGSFALVARALVENSNLIKWSLVFKALSG-LFALICGNGYIVGINQI 153
+ F P+T+ G L + + A+ + S++ L F LS L A + YI G+NQ+
Sbjct: 18 YNFCYPYTMIGRTLCTISASLLAVEKISDISP--LFFIGLSQVLVAHFFMDLYINGVNQV 75
Query: 154 YDISIDKVNKPYLPIAAGDLSVSSA 178
+D IDK+NKPYLP+ +G LS ++A
Sbjct: 76 FDFEIDKINKPYLPLPSGKLSFTNA 100
>Glyma03g03910.1
Length = 365
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 15/146 (10%)
Query: 40 LAGFSNHLTSTRRSCCNPVPKRHKIPISIRASTEVGAAGSD-RPFGNKVLDLKDACWRFL 98
+ G S + TR+ VP R S + SD + + V L A + F
Sbjct: 25 IEGGSTYQQYTRKYVLKAVP---------RPSFDFEPHASDPKNILDSVKKLLVAFYWFC 75
Query: 99 RPHTIRGTALG--SFALVARALVENSNLIKWSLVFKALSGLFALICGNGYIVGINQIYDI 156
P+++ G L S +L+A VE + I L + + + Y+ G+NQ++D+
Sbjct: 76 YPYSMIGQMLSIISTSLLA---VEKLSYISPLFFIGVLQAMVPQLFMSIYMNGVNQLFDV 132
Query: 157 SIDKVNKPYLPIAAGDLSVSSAWLLV 182
IDK+NKP+LP+A+G LS + ++V
Sbjct: 133 EIDKINKPHLPLASGQLSFRTGAIIV 158
>Glyma20g38930.2
Length = 408
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 150 INQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGLLIVGL-------NFGPXXX 202
+NQ++D IDK+NKPYLP+A+G LS ++A F AA LLI+ ++
Sbjct: 170 VNQVFDYEIDKINKPYLPLASGQLSFTTA-----VFIAASLLIMSFWLSLVIGSWPLIWN 224
Query: 203 XXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRGFL 240
VP R KR P+ A + +V F+
Sbjct: 225 VVLTSSVWNVYSINVPLLRWKRHPLLATICTISVWAFI 262
>Glyma20g38930.1
Length = 408
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 12/98 (12%)
Query: 150 INQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVIFFAAAGLLIVGL-------NFGPXXX 202
+NQ++D IDK+NKPYLP+A+G LS ++A F AA LLI+ ++
Sbjct: 170 VNQVFDYEIDKINKPYLPLASGQLSFTTA-----VFIAASLLIMSFWLSLVIGSWPLIWN 224
Query: 203 XXXXXXXXXXXXXXVPPFRMKRFPVAAFLIIATVRGFL 240
VP R KR P+ A + +V F+
Sbjct: 225 VVLTSSVWNVYSINVPLLRWKRHPLLATICTISVWAFI 262
>Glyma13g21920.1
Length = 115
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 30/38 (78%)
Query: 146 YIVGINQIYDISIDKVNKPYLPIAAGDLSVSSAWLLVI 183
YI G+NQ++D+ IDK+NKPYLP+ +G LS ++ +V+
Sbjct: 43 YINGVNQVFDLEIDKINKPYLPLPSGKLSFTNGVFIVV 80