Miyakogusa Predicted Gene

Lj5g3v0309100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0309100.1 tr|Q2MGQ9|Q2MGQ9_MEDTR 14 kDa zinc-binding
protein OS=Medicago truncatula GN=MTR_4g084190 PE=2
SV=1,82.42,0,HISTRIAD,Histidine triad (HIT) protein; no
description,HIT-like domain; seg,NULL; HIT_1,Histidine
tr,NODE_45436_length_646_cov_53.476780.path2.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g17330.1                                                       223   7e-59
Glyma19g20320.1                                                       200   6e-52
Glyma19g30260.1                                                       181   4e-46
Glyma08g45960.1                                                        51   6e-07

>Glyma15g17330.1 
          Length = 178

 Score =  223 bits (568), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 103/117 (88%), Positives = 111/117 (94%)

Query: 46  DSGAPTIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEAR 105
           DS APTIFDKIINKEIPSS+VYEDEKVLAFRDINP+APVHVL+IPK RDGLT+L KA++R
Sbjct: 62  DSEAPTIFDKIINKEIPSSIVYEDEKVLAFRDINPQAPVHVLVIPKLRDGLTQLGKADSR 121

Query: 106 HGEILGQLLYAAKIVAEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQMKWPPG 162
           HGEILGQLLYAAKIVAEKEGI DGFRVVIN+GP+ CQSVYHLHLHVLGGRQM WPPG
Sbjct: 122 HGEILGQLLYAAKIVAEKEGIDDGFRVVINNGPSACQSVYHLHLHVLGGRQMNWPPG 178


>Glyma19g20320.1 
          Length = 159

 Score =  200 bits (508), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 89/117 (76%), Positives = 106/117 (90%)

Query: 46  DSGAPTIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEAR 105
           D+ APTIFDKIINKEIPS+VVYED+KVLAFRDI P+AP H+LIIPKF+DGL+ L+KAE R
Sbjct: 43  DADAPTIFDKIINKEIPSTVVYEDDKVLAFRDITPQAPTHILIIPKFKDGLSGLSKAEER 102

Query: 106 HGEILGQLLYAAKIVAEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQMKWPPG 162
           H EILG+LLY AK+VA++EG+ DGFR+VIN GP GCQSVYH+H+H+LGGRQM WPPG
Sbjct: 103 HFEILGRLLYTAKLVAKQEGLDDGFRIVINDGPKGCQSVYHIHVHLLGGRQMNWPPG 159


>Glyma19g30260.1 
          Length = 129

 Score =  181 bits (458), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 83/115 (72%), Positives = 100/115 (86%)

Query: 47  SGAPTIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEARH 106
           S  PT+FDKIINKEIPS+VVYED+KVLAFRDI+P+AP H+LIIPK RDGLT L+KAE RH
Sbjct: 14  SDGPTVFDKIINKEIPSTVVYEDDKVLAFRDIDPQAPTHILIIPKVRDGLTGLSKAEERH 73

Query: 107 GEILGQLLYAAKIVAEKEGILDGFRVVINSGPAGCQSVYHLHLHVLGGRQMKWPP 161
            EILG+LL  AK+VA++EG+ DGFR+VIN G  G QSVYH+H+H++GGRQM WPP
Sbjct: 74  CEILGRLLCTAKLVAKQEGLDDGFRIVINDGRDGGQSVYHIHVHLIGGRQMGWPP 128


>Glyma08g45960.1 
          Length = 207

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 51  TIFDKIINKEIPSSVVYEDEKVLAFRDINPEAPVHVLIIPKFRDGLTELAKAEARHGEIL 110
            +F KII  + P+  +YED+  L   D +P +  H LIIPK     +     +A    ++
Sbjct: 52  CVFCKIIRDQSPAVKLYEDDMCLCILDTSPLSHGHSLIIPK-----SHFPSLDATPPSVV 106

Query: 111 GQLLYAAKIVAE---KEGILDGFRVVINSGPAGCQSVYHLHLHVL 152
             +      ++    K      F +++N+G A  Q +YH H+H++
Sbjct: 107 AAMCSKVPFISNAIMKATGCSSFNLLVNNGAAAGQVIYHTHMHII 151