Miyakogusa Predicted Gene
- Lj5g3v0308380.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0308380.1 tr|Q60DE9|Q60DE9_ORYSJ Os05g0443700 protein
OS=Oryza sativa subsp. japonica GN=B1110B01.19 PE=2
SV=1,46.58,2e-18,t-snare proteins,t-SNARE; seg,NULL;
Syntaxin-6_N,Syntaxin 6, N-terminal; no description,NULL,CUFF.52789.1
(339 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g35500.1 413 e-115
Glyma06g04790.2 390 e-108
Glyma06g04790.1 387 e-108
Glyma04g04710.1 379 e-105
Glyma14g09660.1 293 1e-79
Glyma17g07100.1 149 6e-36
Glyma20g21200.1 148 7e-36
Glyma20g21200.3 111 1e-24
Glyma20g21200.2 111 1e-24
Glyma03g28340.1 60 5e-09
>Glyma17g35500.1
Length = 314
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/342 (64%), Positives = 241/342 (70%), Gaps = 31/342 (9%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
MASSFDRWEKDPFFNAAEEVQESADRM+S YRTWLHATKD SSMWNSDEL RDL+T L T
Sbjct: 1 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWLHATKDASSMWNSDELCRDLRTALST 60
Query: 61 AKWQLEEFERAARLNYSRTSG-EARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
AKWQ+EEF RA R +Y ++S EAR RH+DFITAIED I KVEH L ES G KAS+PW
Sbjct: 61 AKWQVEEFARAVRSSYGKSSSEEARNRHRDFITAIEDNIMKVEHSLSESVVPGGKASLPW 120
Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLGE 179
+ LDEGEQDELA FLSGMPAA +R+ E+P+LS+N
Sbjct: 121 LRLDEGEQDELALFLSGMPAA--------NNRNIEDPRLSEN------------------ 154
Query: 180 AKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXXXPMHKVPSLSGFVSAME--S 237
E+ GHRRAASASADIGF+KISV DDAQQ P+HKVPSLSGF+ +ME S
Sbjct: 155 --EDISHGHRRAASASADIGFYKISVHDDAQQWSSSSGSSGPIHKVPSLSGFLRSMESVS 212
Query: 238 KMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKNLYGW 297
K+KWPRNGYRKLK DHHKET LLPTA N+GN A RSKS L SCDE YDK LYGW
Sbjct: 213 KLKWPRNGYRKLKAEDHHKETDGELLPTAGLNRGNNARCERSKSGLDSCDESYDKQLYGW 272
Query: 298 YGAIRRQLQRSQYQMQYSQPVRXXXXXXXXXXXXXXXAFRTM 339
+GAI RQLQRSQYQMQYSQPVR AF M
Sbjct: 273 HGAIWRQLQRSQYQMQYSQPVRIVVWIVVLLCFIALIAFHAM 314
>Glyma06g04790.2
Length = 334
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/346 (62%), Positives = 243/346 (70%), Gaps = 19/346 (5%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
MASSFDRWEKDPFFNAAEEVQESADRM+S YRTW+HA +D SS WN DELRRDL+TTLGT
Sbjct: 1 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWIHARRDASSPWNCDELRRDLETTLGT 60
Query: 61 AKWQLEEFERAARLNYSRTSGE-ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
AKWQLEEFERAAR +YSR S E AR RH+DFI AI DKI KVEH L ES +GSKAS+PW
Sbjct: 61 AKWQLEEFERAARSSYSRVSSEDARNRHRDFIHAIGDKIQKVEHSLQESVHSGSKASLPW 120
Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLG- 178
LDEGE+DELASFLSG+P RD E+ Q NCS N+H+SSG G
Sbjct: 121 TRLDEGERDELASFLSGIPVLIK-----CVGRDNESLQ-------ANCSSNLHVSSGWGS 168
Query: 179 -EAKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXX--XPMHKVPSLSGFVSAM 235
EA E RGHRRAASA ADIG WKI+V+DD QQ PMHKV SLSGF +M
Sbjct: 169 SEAALEKSRGHRRAASADADIGTWKITVSDDVQQSSSSNGSSGPTPMHKVASLSGFFGSM 228
Query: 236 E--SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKN 293
E SK KWP+NGYRKLK V+ +E LLP A N G A Y RSKSSL +C+ECYDK
Sbjct: 229 ETISKFKWPKNGYRKLKAVNPCEEEDKALLPPAGLNGGIEAYYERSKSSLGNCNECYDKQ 288
Query: 294 LYGWYGAIRRQLQRSQYQMQYSQPVRXXXXXXXXXXXXXXXAFRTM 339
L+GWYGA+ RQLQRSQYQMQY++PV+ AF TM
Sbjct: 289 LHGWYGALHRQLQRSQYQMQYNRPVQIAVWAVILLCFIVLIAFCTM 334
>Glyma06g04790.1
Length = 389
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/326 (65%), Positives = 239/326 (73%), Gaps = 19/326 (5%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
MASSFDRWEKDPFFNAAEEVQESADRM+S YRTW+HA +D SS WN DELRRDL+TTLGT
Sbjct: 1 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWIHARRDASSPWNCDELRRDLETTLGT 60
Query: 61 AKWQLEEFERAARLNYSRTSGE-ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
AKWQLEEFERAAR +YSR S E AR RH+DFI AI DKI KVEH L ES +GSKAS+PW
Sbjct: 61 AKWQLEEFERAARSSYSRVSSEDARNRHRDFIHAIGDKIQKVEHSLQESVHSGSKASLPW 120
Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLG- 178
LDEGE+DELASFLSG+P RD E+ Q NCS N+H+SSG G
Sbjct: 121 TRLDEGERDELASFLSGIPVLIK-----CVGRDNESLQ-------ANCSSNLHVSSGWGS 168
Query: 179 -EAKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXX--XPMHKVPSLSGFVSAM 235
EA E RGHRRAASA ADIG WKI+V+DD QQ PMHKV SLSGF +M
Sbjct: 169 SEAALEKSRGHRRAASADADIGTWKITVSDDVQQSSSSNGSSGPTPMHKVASLSGFFGSM 228
Query: 236 E--SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKN 293
E SK KWP+NGYRKLK V+ +E LLP A N G A Y RSKSSL +C+ECYDK
Sbjct: 229 ETISKFKWPKNGYRKLKAVNPCEEEDKALLPPAGLNGGIEAYYERSKSSLGNCNECYDKQ 288
Query: 294 LYGWYGAIRRQLQRSQYQMQYSQPVR 319
L+GWYGA+ RQLQRSQYQMQY++PV+
Sbjct: 289 LHGWYGALHRQLQRSQYQMQYNRPVQ 314
>Glyma04g04710.1
Length = 339
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/346 (61%), Positives = 239/346 (69%), Gaps = 14/346 (4%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
MASSFDRWEKDPFFNAAEEVQESADRM+S YRTW+HA +D SS WN DELRRDLQTTLGT
Sbjct: 1 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWIHAMRDASSPWNCDELRRDLQTTLGT 60
Query: 61 AKWQLEEFERAARLNYSRTSGE-ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
AKWQLEEFERAAR +YS+ S E AR RH+DFI AI KI KVEH L ES +GSKAS+PW
Sbjct: 61 AKWQLEEFERAARSSYSKVSSEDARNRHRDFIHAIGGKIKKVEHSLQESVHSGSKASLPW 120
Query: 120 IHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLG- 178
+ LDEGE+DELASFLSG+PAA RD E+ Q N S N+ +SSG G
Sbjct: 121 MRLDEGERDELASFLSGIPAAGGKGLIECVGRDCESLQ-------TNYSSNLLVSSGWGS 173
Query: 179 -EAKEETPRGHRRAASASADIGFWKISVADDAQQXXXXXXXX--XPMHKVPSLSGFVSAM 235
EA E GHRRAASA ADIG WKI+V+DD QQ PMHKV SLSGF +M
Sbjct: 174 SEAAPEKSHGHRRAASADADIGNWKITVSDDVQQSSSSNGSSGPTPMHKVASLSGFFGSM 233
Query: 236 E--SKMKWPRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKN 293
E SK+KWP+NGYRKLK V+ +E LL A N G A Y RSKS L + DECYDK
Sbjct: 234 ETISKLKWPKNGYRKLKAVNPCEEVDKALLAPAGLNGGIKAYYERSKSCLDNGDECYDKQ 293
Query: 294 LYGWYGAIRRQLQRSQYQMQYSQPVRXXXXXXXXXXXXXXXAFRTM 339
L GWYGA+ RQLQRSQYQMQY++PV+ AF TM
Sbjct: 294 LQGWYGALHRQLQRSQYQMQYNRPVQMAVWAVILLCFIVLIAFCTM 339
>Glyma14g09660.1
Length = 267
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/258 (60%), Positives = 172/258 (66%), Gaps = 35/258 (13%)
Query: 65 LEEFERAARLNYSRTSGE-ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPWIHLD 123
LEEFERA R +Y + S E R RH+DFITAIEDKI K+EH L ES G KAS+PW+HLD
Sbjct: 1 LEEFERAVRSSYGKVSSEEVRNRHRDFITAIEDKIVKIEHSLSESVNPGGKASLPWLHLD 60
Query: 124 EGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLGEAKEE 183
EGEQ ELA FLSGMPAA ++ NC K+ +SSG ++ EE
Sbjct: 61 EGEQVELALFLSGMPAANNS----------------------NCLKDFRVSSGWDDSNEE 98
Query: 184 TPRGHRRAASASADIGFWKISVADDAQQXXXXXXXXXPMHKVPSLSGFVSAME--SKMKW 241
GHRRAASASADIGFWK+SV DDAQQ PMHKVPSL GF+S ME SK+KW
Sbjct: 99 ISHGHRRAASASADIGFWKVSVHDDAQQWSSSSGSSGPMHKVPSLLGFLSYMESVSKLKW 158
Query: 242 PRNGYRKLKVVDHHKETKSTLLPTAETNKGNMACYGRSKSSLKSCDECYDKNLYGWYGAI 301
PRNGYRKLK DHHKET LLPT G ++S L SCDE YDK LYGWY AI
Sbjct: 159 PRNGYRKLKAADHHKETDRELLPTV----------GLNRSGLDSCDETYDKQLYGWYCAI 208
Query: 302 RRQLQRSQYQMQYSQPVR 319
RQLQRSQYQMQYSQPVR
Sbjct: 209 GRQLQRSQYQMQYSQPVR 226
>Glyma17g07100.1
Length = 329
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 119/184 (64%), Gaps = 5/184 (2%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
+A+SFD W KD FF+AAEEVQESAD M+SAYR WL ++ S+ +EL R+LQT LGT
Sbjct: 3 VANSFDLWRKDGFFSAAEEVQESADIMESAYRAWLREKRERSTPEELNELCRELQTALGT 62
Query: 61 AKWQLEEFERAARLNYSRTSGE--ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMP 118
AKWQLEEF++A RL+Y R G+ TRH+ FI+AIE +IT+VE L ES K +
Sbjct: 63 AKWQLEEFDKAVRLSY-RHHGDDNTSTRHRQFISAIESQITQVEAALRESYIEEGKQPLR 121
Query: 119 WIHLDEGEQDELASFLSGMPAAESNDPTWSKSRDGENPQLSDNDLVINCSKNVHISSGLG 178
W++LDE E+D+LA+FLSG ++ T + + + D + IN +N IS+
Sbjct: 122 WVNLDEEERDDLAAFLSG--TCQTTQSTNDDCMEVKQAKKEDKIVDINTFRNRDISASEK 179
Query: 179 EAKE 182
+K+
Sbjct: 180 SSKD 183
>Glyma20g21200.1
Length = 329
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 100/137 (72%), Gaps = 1/137 (0%)
Query: 1 MASSFDRWEKDPFFNAAEEVQESADRMDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGT 60
+A+SFD W KD FF+AAEEVQESAD M+SAYR WL ++ S+ +EL R+LQT LGT
Sbjct: 3 VANSFDLWRKDAFFSAAEEVQESADIMESAYRAWLREKRERSTPEELNELCRELQTALGT 62
Query: 61 AKWQLEEFERAARLNYSRTSGE-ARTRHQDFITAIEDKITKVEHLLHESSTTGSKASMPW 119
AKWQLEEF++A RL+Y S + TRH+ FI+AIE +IT+VE L ES K + W
Sbjct: 63 AKWQLEEFDKAVRLSYRPHSDDNTSTRHRQFISAIESQITQVEAALRESYIEEGKQPLRW 122
Query: 120 IHLDEGEQDELASFLSG 136
++LDE E+D+LA+FLSG
Sbjct: 123 VNLDEEERDDLAAFLSG 139
>Glyma20g21200.3
Length = 301
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 27 MDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGTAKWQLEEFERAARLNYSRTSGE-ART 85
M+SAYR WL ++ S+ +EL R+LQT LGTAKWQLEEF++A RL+Y S + T
Sbjct: 1 MESAYRAWLREKRERSTPEELNELCRELQTALGTAKWQLEEFDKAVRLSYRPHSDDNTST 60
Query: 86 RHQDFITAIEDKITKVEHLLHESSTTGSKASMPWIHLDEGEQDELASFLSG 136
RH+ FI+AIE +IT+VE L ES K + W++LDE E+D+LA+FLSG
Sbjct: 61 RHRQFISAIESQITQVEAALRESYIEEGKQPLRWVNLDEEERDDLAAFLSG 111
>Glyma20g21200.2
Length = 301
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 78/111 (70%), Gaps = 1/111 (0%)
Query: 27 MDSAYRTWLHATKDTSSMWNSDELRRDLQTTLGTAKWQLEEFERAARLNYSRTSGE-ART 85
M+SAYR WL ++ S+ +EL R+LQT LGTAKWQLEEF++A RL+Y S + T
Sbjct: 1 MESAYRAWLREKRERSTPEELNELCRELQTALGTAKWQLEEFDKAVRLSYRPHSDDNTST 60
Query: 86 RHQDFITAIEDKITKVEHLLHESSTTGSKASMPWIHLDEGEQDELASFLSG 136
RH+ FI+AIE +IT+VE L ES K + W++LDE E+D+LA+FLSG
Sbjct: 61 RHRQFISAIESQITQVEAALRESYIEEGKQPLRWVNLDEEERDDLAAFLSG 111
>Glyma03g28340.1
Length = 98
Score = 59.7 bits (143), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 227 SLSGFVSAMES--KMKWPRNGYRKLKVVDHHKETKSTLLPTAETNK 270
SL GF+S+MES ++KWPRNGYRKLK D HKE LLP A N+
Sbjct: 3 SLLGFLSSMESVSRLKWPRNGYRKLKAADDHKEIDRELLPIAGLNR 48