Miyakogusa Predicted Gene

Lj5g3v0290680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0290680.1 Non Chatacterized Hit- tr|D8S0G6|D8S0G6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.32,2e-18,zinc finger,Zinc finger, C2H2-like;
ZINC_FINGER_C2H2_1,Zinc finger, C2H2; ZINC_FINGER_C2H2_2,Zinc
fi,CUFF.52831.1
         (380 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09340.1                                                       478   e-135
Glyma17g35830.1                                                       465   e-131
Glyma18g00680.1                                                       214   1e-55
Glyma11g36770.1                                                       209   5e-54

>Glyma14g09340.1 
          Length = 412

 Score =  478 bits (1231), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/359 (67%), Positives = 275/359 (76%), Gaps = 14/359 (3%)

Query: 2   NPLSLLHTANAXXXXXXXXXXXRQKPTTVSVSVLFPHRHN-RFRCCSS-IEIDMVRDNKT 59
           N L LLH ANA              P+    +  FPHRH  R +CCSS I+IDMV+ N  
Sbjct: 29  NSLFLLHNANAIIHFNFHSHPTL--PSIPRTTKPFPHRHYPRIQCCSSNIQIDMVK-NSQ 85

Query: 60  GSYAAKQNKVVVLWDLDNKPPRGPPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQW 119
           G YA K +KVVVLWDLDNKPPRG PY AAVSLKTLA  FG +VD SAYANRHAF+HLPQW
Sbjct: 86  GIYAPKNDKVVVLWDLDNKPPRGAPYDAAVSLKTLAARFGHLVDFSAYANRHAFVHLPQW 145

Query: 120 VLHERRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRM 179
           VLH+RR R+  DILE+KG++TP +PY C VCGRKCKT+LDLKKHFKQLHQRERQKKLNR+
Sbjct: 146 VLHQRRHRRNLDILERKGVITPPEPYTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRL 205

Query: 180 NSLKGKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAAD 239
            SLKGKKR RFKERF+RGNHKY++AARTLV PKVGYGLA+ELRRAGVFVKTV+DKPQAAD
Sbjct: 206 KSLKGKKRHRFKERFLRGNHKYDDAARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAAD 265

Query: 240 WALKRQMQHSMSRGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGDADRALGQHADFWVP 299
           WALKRQM HSMSRGIDWLFLVSDDSDFSEML+RAREA+LGTVVVGD D+ALG+HAD WVP
Sbjct: 266 WALKRQMVHSMSRGIDWLFLVSDDSDFSEMLRRAREADLGTVVVGDWDKALGRHADLWVP 325

Query: 300 WIAVEKGEVSEMDLKNXXXXXXXXXX--------XDSPDGLFFNEGDEELDDDFVLVYS 350
           W  VE GEV ++  K                    D   G+F NE DEEL  +F+L+YS
Sbjct: 326 WSGVENGEVGDLLPKRRRENSRRREQGEEHGFGLEDDDGGVFLNE-DEELGQEFMLLYS 383


>Glyma17g35830.1 
          Length = 330

 Score =  465 bits (1197), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 226/292 (77%), Positives = 251/292 (85%), Gaps = 9/292 (3%)

Query: 28  TTVSVSVLFPH-RH-NRFRCCS------SIEIDMVRDNKTGSYAAKQNKVVVLWDLDNKP 79
           TT++ +  FPH RH  R +CCS      SIEIDMV+ N  G YA K +KVVVLWDLDNKP
Sbjct: 10  TTITTTKPFPHNRHFPRIQCCSNNNNNNSIEIDMVK-NSQGIYAPKASKVVVLWDLDNKP 68

Query: 80  PRGPPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHERRQRKTTDILEKKGIV 139
           PRGPPY  A+SLKTLA  FGD+VD SAYANRHAF+HLPQWVL +RR RK  DILE+KGI+
Sbjct: 69  PRGPPYDVAISLKTLAARFGDLVDFSAYANRHAFVHLPQWVLQQRRDRKNLDILERKGII 128

Query: 140 TPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLKGKKRQRFKERFIRGNH 199
           TP +PY C VCGRKCKT+LDLKKHFKQLHQRERQKKLNR+ SLKGKKR RFKERF+RGNH
Sbjct: 129 TPPEPYTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRLKSLKGKKRHRFKERFLRGNH 188

Query: 200 KYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWLFL 259
           KY++AARTLV PKVGYGLA+ELRRAGVFVKTV+DKPQAADWALKRQM HSMSRGIDWLFL
Sbjct: 189 KYDDAARTLVVPKVGYGLAAELRRAGVFVKTVQDKPQAADWALKRQMVHSMSRGIDWLFL 248

Query: 260 VSDDSDFSEMLKRAREANLGTVVVGDADRALGQHADFWVPWIAVEKGEVSEM 311
           VSDDSDFSEML+RAREA+LGTVVVGD DRALG+HAD WVPW  VE GEV ++
Sbjct: 249 VSDDSDFSEMLRRAREADLGTVVVGDWDRALGRHADLWVPWSGVENGEVGDL 300


>Glyma18g00680.1 
          Length = 349

 Score =  214 bits (545), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/246 (46%), Positives = 156/246 (63%), Gaps = 3/246 (1%)

Query: 65  KQNKVVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHE 123
           K N+V + WDLDNKPP   PPY  A  L+  A SFG V  ++AYAN H F H+PQ V   
Sbjct: 12  KPNRVGLFWDLDNKPPNSIPPYEVANKLRIAASSFGVVRYMAAYANSHTFSHVPQGVREI 71

Query: 124 RRQRKTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLK 183
           R++++    LE KG++ P+ PY C VCGRK  TN  L  HFKQLH+RE  K++N++ S +
Sbjct: 72  RKEKELLYRLENKGVIKPNQPYRCKVCGRKFHTNDKLVNHFKQLHEREHAKRMNQIESSR 131

Query: 184 GKKRQRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALK 243
           G +R +   ++     KY +AA  ++TPKVGYGLA ELRRAG +V+TV DKPQAAD AL+
Sbjct: 132 GSRRVKLVAKYSMKMEKYKKAASDILTPKVGYGLADELRRAGFWVQTVSDKPQAADQALQ 191

Query: 244 RQMQHSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGDADRA-LGQHADFWVPWI 301
             +   M  R ++ + LVSDDSDF +++  A+   L TVV+GD D   L + AD    W 
Sbjct: 192 SHIVDIMDHRRVECVVLVSDDSDFVDVINEAKMRCLKTVVIGDIDDGFLKRTADTAFSWE 251

Query: 302 AVEKGE 307
            +  G+
Sbjct: 252 EILMGK 257


>Glyma11g36770.1 
          Length = 323

 Score =  209 bits (531), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 111/242 (45%), Positives = 151/242 (62%), Gaps = 3/242 (1%)

Query: 69  VVVLWDLDNKPPRG-PPYHAAVSLKTLAESFGDVVDISAYANRHAFIHLPQWVLHERRQR 127
           V + WDLDNKPP   PPY  A  L+  A SFG V  + AYAN H F H+PQ V   R+++
Sbjct: 1   VGLFWDLDNKPPNSIPPYEVANKLRIAASSFGVVRYMVAYANSHTFSHVPQGVRESRKEK 60

Query: 128 KTTDILEKKGIVTPSDPYVCTVCGRKCKTNLDLKKHFKQLHQRERQKKLNRMNSLKGKKR 187
           +    LE KG++ P+ PY C VCGRK  TN  L  HFKQLH+ E  K++N++ S +G +R
Sbjct: 61  ELLYRLENKGVIKPNQPYRCKVCGRKFYTNDKLVNHFKQLHESEHTKRMNQIESARGSRR 120

Query: 188 QRFKERFIRGNHKYNEAARTLVTPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQ 247
            +   ++     KY +AA  ++TPKVGYGLA EL+RAG +V+TV DKPQAAD AL+  + 
Sbjct: 121 VKLVAKYSMKMEKYKKAASDILTPKVGYGLADELKRAGFWVRTVSDKPQAADQALQSHIV 180

Query: 248 HSMS-RGIDWLFLVSDDSDFSEMLKRAREANLGTVVVGDADRA-LGQHADFWVPWIAVEK 305
             M  R ++ + LVSDDSDF +++  A+   L TVV+GD D   L + AD    W  +  
Sbjct: 181 DIMDHRRVECVVLVSDDSDFVDVINEAKMRCLKTVVIGDIDEGFLKRTADTAFSWEEILM 240

Query: 306 GE 307
           G+
Sbjct: 241 GK 242