Miyakogusa Predicted Gene
- Lj5g3v0290460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0290460.1 Non Chatacterized Hit- tr|K4AJX8|K4AJX8_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,40.74,2e-18,DUF827,Protein of unknown function DUF827, plant;
coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY,CUFF.52734.1
(392 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g09080.1 298 5e-81
Glyma04g04100.1 252 5e-67
Glyma06g04270.1 234 2e-61
Glyma16g15790.2 109 6e-24
Glyma16g15790.1 109 6e-24
Glyma04g04100.2 100 4e-21
Glyma08g35480.1 83 5e-16
Glyma01g32380.1 60 4e-09
Glyma11g35930.1 58 2e-08
Glyma09g01770.1 57 3e-08
Glyma03g04620.1 57 3e-08
Glyma18g02470.1 57 4e-08
Glyma18g08390.1 55 1e-07
Glyma15g12720.1 54 4e-07
Glyma08g44330.1 50 4e-06
>Glyma14g09080.1
Length = 828
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 186/321 (57%), Positives = 209/321 (65%), Gaps = 48/321 (14%)
Query: 83 PIDNSTSTPKVHGTEESNQGTIAADSSPGALEDIFNRQQDGGSTANAATSDVDNLMNLST 142
PI+ T P++ T+ G ++A+S GALEDI +RQQ G SDVDN M L T
Sbjct: 17 PIELITEPPQIKLTDVP--GAMSAESEAGALEDISDRQQHG--------SDVDNQMELLT 66
Query: 143 SSSEPKELQIDPPHSDVPIDNSGSTPNAAVDVTEQSHKEAVAEDSKLAVLEDAFNRQHXX 202
SSSE KELQ D H ++ ID S T + V V VA +
Sbjct: 67 SSSEEKELQND--HKELKIDPS-QTKDTDVAVGAVGSPAVVAGNG--------------- 108
Query: 203 XXXXXXXXXXXXQMELLASSSEKKELQDDHKELKINFPQTKITDVA-------AGVVDSP 255
Q+ L S SEK ELQ+DHKE KI PQ KI DV+ AG VDSP
Sbjct: 109 ---------ADNQINHLDSPSEKIELQNDHKEQKIKLPQPKIADVSRGAVDSPAGTVDSP 159
Query: 256 TTA----LRRGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEI 311
T A RRG+IDTAAPFESVK+AVSKFGGIVDWKAHR+QTVERRK VE EL+ Q+EI
Sbjct: 160 TYAKQIAARRGLIDTAAPFESVKQAVSKFGGIVDWKAHRVQTVERRKHVEHELDLVQQEI 219
Query: 312 PEFRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEME 371
PE RK+S AE K QVLQELDSTKRLIEELKLNLERAQTEE QARQDSELAKLRVEEME
Sbjct: 220 PECRKKSVVAEQAKTQVLQELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEME 279
Query: 372 QGIADHSSVAAKAQLEVAKAR 392
QGIAD SS+AA+AQLEVAKAR
Sbjct: 280 QGIADDSSIAARAQLEVAKAR 300
>Glyma04g04100.1
Length = 973
Score = 252 bits (643), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 190/432 (43%), Positives = 240/432 (55%), Gaps = 80/432 (18%)
Query: 10 SESSTRNAELKPPAETPQENFVAINPPNNLSSNEASINPLGNNSEVEPGIRLPVTEFSTN 69
SE+S + AE ETP V P+ SS+ PL ++ G +LP +EFS+
Sbjct: 54 SEASPKIAE-----ETPLAEHVGDKLPSQFSSDIVEDTPLAEHA----GDKLP-SEFSSE 103
Query: 70 ASD----VETVGQDEHPPIDNST----STPKVHGTEESNQGTIAADSSPGALEDIFNRQQ 121
+ E VG D P +S + P H T+ S + A+ SP A E + ++
Sbjct: 104 IVEETPLAEHVG-DNQPSASSSKIDEETPPAEHVTDNSESSSKTAEESPLA-EHVVDK-- 159
Query: 122 DGGSTANAATSDVDNLMNLSTSSSEPKELQIDPPHSD-------VPIDNS---------- 164
+ +T+ + + M L+ E E+ I+PP + +P+ N
Sbjct: 160 ----LPSESTTKIADEMPLADPPEENTEV-INPPGNQSSTEAPTIPLSNGKMEPGTHLPV 214
Query: 165 ------GSTPNA----------AVDVTEQSHKEAVAEDSKLAVLEDAFNRQ--HXXXXXX 206
PNA AVDVTE+S + AEDS+ +E+ +R
Sbjct: 215 DEFSELAVLPNASDDQTLIQDVAVDVTEKSQQVTSAEDSEPGAVENVSDRHELQDDISNI 274
Query: 207 XXXXXXXXQMELLASSSEKKELQDDHKELKI------NFPQTKITDVAAGVVDSPTTALR 260
++ L ASSSE K+ Q DH EL + + P+ K+ D +
Sbjct: 275 TADSDADNEIRLSASSSETKDSQSDHNELTMAMGTVGSLPRAKLFDA------------K 322
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEA 320
RG+IDT APFESVKEAVSKFGGIVDWKAHRI TVERR VE+ELEKAQEEIPE++K++E
Sbjct: 323 RGLIDTTAPFESVKEAVSKFGGIVDWKAHRIHTVERRTLVEQELEKAQEEIPEYKKQAET 382
Query: 321 AEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHSSV 380
AE K QVL+ELDSTKRLIEELKLNLERA TEE QARQDSELAKLRVEEMEQGIAD SSV
Sbjct: 383 AEQEKGQVLKELDSTKRLIEELKLNLERAHTEERQARQDSELAKLRVEEMEQGIADESSV 442
Query: 381 AAKAQLEVAKAR 392
AAKAQLEVAKAR
Sbjct: 443 AAKAQLEVAKAR 454
>Glyma06g04270.1
Length = 745
Score = 234 bits (596), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 140/241 (58%), Positives = 163/241 (67%), Gaps = 31/241 (12%)
Query: 155 PHSDVPIDNS---GSTPNAAVDVTEQSHKEAVAEDSKLAVLEDAFNRQHXXXXXXXXXXX 211
P + +P+D PNA+VD T + +D+ + V E + Q
Sbjct: 37 PGTHLPVDEFSELAVLPNASVDQT-------LIQDAAVDVTEKS---QQDDVSNITADSD 86
Query: 212 XXXQMELLASSSEKKELQDDHKELKINFPQTKITDVAAGVVDSPTTALRRGIIDTAAPFE 271
++ L ASSSE K+LQ + P+ K+ D +RG IDT APFE
Sbjct: 87 VDNEIRLSASSSETKDLQIG------SLPRAKLFDA------------KRGHIDTTAPFE 128
Query: 272 SVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEAAEHGKVQVLQE 331
SVKEAVSKFGGIVDWKAHRI TVERR VE+ELEKAQE+IPE++K++EAAE K QVL+E
Sbjct: 129 SVKEAVSKFGGIVDWKAHRIHTVERRTLVEQELEKAQEDIPEYKKQAEAAEQEKGQVLKE 188
Query: 332 LDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHSSVAAKAQLEVAKA 391
LDSTKRLIEELKLNLERAQTEE QARQDSELAKLRVEEMEQGIAD SSVAAKAQLEVAKA
Sbjct: 189 LDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKA 248
Query: 392 R 392
R
Sbjct: 249 R 249
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 74/164 (45%), Gaps = 50/164 (30%)
Query: 21 PPAETPQENFVAINPPNNLSSNEASINPLGNNSEVEPGIRLPVTEFST-----NASDVET 75
P A+ P+EN INP + SS EA PL +N ++EPG LPV EFS NAS +T
Sbjct: 2 PLADPPEENTEVINPHGDQSSTEAPTIPL-SNGKMEPGTHLPVDEFSELAVLPNASVDQT 60
Query: 76 VGQDEHPPIDNSTSTPKVHGTEESNQGTIAADSSPGALEDIFNRQQDGGSTANAATSDVD 135
+ QD V TE+S Q +D+ N D SDVD
Sbjct: 61 LIQD-----------AAVDVTEKSQQ------------DDVSNITAD---------SDVD 88
Query: 136 NLMNLSTSSSEPKELQIDPPHSDVPIDNSGSTPNAAVDVTEQSH 179
N + LS SSSE K+LQI GS P A + ++ H
Sbjct: 89 NEIRLSASSSETKDLQI------------GSLPRAKLFDAKRGH 120
>Glyma16g15790.2
Length = 615
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 22/133 (16%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTV--ERRKQVEKELEKAQEEIPEFRKRS 318
+ +I+TAAPFESVK+AVSKFGG +DWK+ R Q++ ER K VE +FRK
Sbjct: 25 KHVIETAAPFESVKDAVSKFGGRIDWKSRRTQSLVEERSKLVE-----------DFRKEE 73
Query: 319 EAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHS 378
A +EL++TK+LIEELK +LE+ + +E QA++++E L++EEMEQ I +
Sbjct: 74 TA---------EELENTKKLIEELKTSLEKIEKDELQAKEEAERVILKIEEMEQDIVSEA 124
Query: 379 SVAAKAQLEVAKA 391
S+ AKAQLE KA
Sbjct: 125 SIEAKAQLEAEKA 137
>Glyma16g15790.1
Length = 615
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/133 (47%), Positives = 88/133 (66%), Gaps = 22/133 (16%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTV--ERRKQVEKELEKAQEEIPEFRKRS 318
+ +I+TAAPFESVK+AVSKFGG +DWK+ R Q++ ER K VE +FRK
Sbjct: 25 KHVIETAAPFESVKDAVSKFGGRIDWKSRRTQSLVEERSKLVE-----------DFRKEE 73
Query: 319 EAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHS 378
A +EL++TK+LIEELK +LE+ + +E QA++++E L++EEMEQ I +
Sbjct: 74 TA---------EELENTKKLIEELKTSLEKIEKDELQAKEEAERVILKIEEMEQDIVSEA 124
Query: 379 SVAAKAQLEVAKA 391
S+ AKAQLE KA
Sbjct: 125 SIEAKAQLEAEKA 137
>Glyma04g04100.2
Length = 323
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 143/307 (46%), Gaps = 82/307 (26%)
Query: 10 SESSTRNAELKPPAETPQENFVAINPPNNLSSNEASINPLGNNSEVEPGIRLPVTEFSTN 69
SE+S + AE ETP V P+ SS+ PL ++ G +LP +EFS+
Sbjct: 54 SEASPKIAE-----ETPLAEHVGDKLPSQFSSDIVEDTPLAEHA----GDKLP-SEFSSE 103
Query: 70 ASD----VETVGQDEHPPIDNST----STPKVHGTEESNQGTIAADSSPGALEDIFNRQQ 121
+ E VG D P +S + P H T+ S + A+ SP A E + ++
Sbjct: 104 IVEETPLAEHVG-DNQPSASSSKIDEETPPAEHVTDNSESSSKTAEESPLA-EHVVDK-- 159
Query: 122 DGGSTANAATSDVDNLMNLSTSSSEPKELQIDPPHSD-------VPIDNSGSTPNAAVDV 174
+ +T+ + + M L+ E E+ I+PP + +P+ N P+ AVDV
Sbjct: 160 ----LPSESTTKIADEMPLADPPEENTEV-INPPGNQSSTEAPTIPLSNGKMEPDVAVDV 214
Query: 175 TEQSHKEAVAEDSKLAVLEDAFNRQHXXXXXXXXXXXXXXQMELLASSSEKKELQDDHKE 234
TE+S + AEDS+ A SSSE K+ Q DH E
Sbjct: 215 TEKSQQVTSAEDSEPA------------------------------SSSETKDSQSDHNE 244
Query: 235 LKI------NFPQTKITDVAAGVVDSPTTALRRGIIDTAAPFESVKEAVSKFGGIVDWKA 288
L + + P+ K+ D +RG+IDT APFESVKEAVSKFGGIVDWKA
Sbjct: 245 LTMAMGTVGSLPRAKLFDA------------KRGLIDTTAPFESVKEAVSKFGGIVDWKA 292
Query: 289 HRIQTVE 295
HRI TVE
Sbjct: 293 HRIHTVE 299
>Glyma08g35480.1
Length = 586
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 77/122 (63%), Gaps = 22/122 (18%)
Query: 272 SVKEAVSKFGGIVDWKAHRIQTV--ERRKQVEKELEKAQEEIPEFRKRSEAAEHGKVQVL 329
+ K+AVSKFGG +DWK+ R Q++ ER K E +FRK ++
Sbjct: 4 TFKDAVSKFGGRIDWKSRRTQSLVEERNKLAE-----------DFRKE---------EIA 43
Query: 330 QELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIADHSSVAAKAQLEVA 389
+EL++TK+LIEELK +LE+ + +E +A+++ E L++EEMEQ IA +S+ AKA+LE
Sbjct: 44 EELENTKKLIEELKNSLEKVEKDELEAKKEVEHVILKIEEMEQDIASEASIEAKAKLEAK 103
Query: 390 KA 391
K+
Sbjct: 104 KS 105
>Glyma01g32380.1
Length = 559
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWK-------AHRIQTVERRKQVEKELEKAQEEIPE 313
R IDT+APFESV+EAV++FGG+ WK E E + EK +E+
Sbjct: 17 RAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAATEPHHTEELDPEKLEEQATV 76
Query: 314 FRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTE 352
K E + VL+EL+STKRL+E LK L++ ++E
Sbjct: 77 LEKELILKERETLDVLKELESTKRLVENLKSKLQKEESE 115
>Glyma11g35930.1
Length = 573
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEA 320
R IDT+ PF SVKEAV++FGG W +E + +L+K +E+ E K
Sbjct: 56 RAEIDTSPPFGSVKEAVTRFGGSGPWIPF-FNNIE-----DFDLKKVEEQAAELEKDLIV 109
Query: 321 AEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQD 359
E + VL+EL +TKR++E+LK L++ + +C A QD
Sbjct: 110 KELETLDVLEELGATKRIVEDLKQQLQK-EAMKCLATQD 147
>Glyma09g01770.1
Length = 577
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
Query: 243 KITDVAAGVVDSPTTALRRGIIDTAAPFESVKEAVSKFGGI-VDWKAHRIQTVERRKQVE 301
+I D G DSP A G IDT APF+SVK AVS FG + V + H I +R+ E
Sbjct: 4 RIRDQERGT-DSPREA---GEIDTRAPFQSVKAAVSLFGEVAVSKEKHSI----KRRSSE 55
Query: 302 KELEK------AQEEIPEFRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQ 355
LEK AQ E+ + +K+ E+AE+ + + L ELD K ++EL L + +
Sbjct: 56 NVLEKETQLLLAQRELNKIKKQLESAENTRSKTLSELDKAKVTLQELTKKLNSVRESKQS 115
Query: 356 ARQDSELAKLRVEEMEQGIA 375
A + +E K + +E+EQ ++
Sbjct: 116 AIEAAEAVKNQAKELEQALS 135
>Glyma03g04620.1
Length = 560
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 7/99 (7%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKA-------HRIQTVERRKQVEKELEKAQEEIPE 313
R IDT+APFESV+EAV++FGG+ WK E E + EK +E+
Sbjct: 17 RAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAAPEPHHAEELDPEKLEEQAAV 76
Query: 314 FRKRSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTE 352
K E + VL+EL+STKRL+E LK +++ ++E
Sbjct: 77 LEKDLILKERETLDVLKELESTKRLVENLKSKVQKEESE 115
>Glyma18g02470.1
Length = 439
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 261 RGIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQVEKELEKAQEEIPEFRKRSEA 320
R IDT+ PF SVKEAV++FGG W + +E +L+K +E+ E K
Sbjct: 45 RAEIDTSPPFGSVKEAVTRFGGSGPWIPY-FNNIENF-----DLKKVEEQAAELEKDLIV 98
Query: 321 AEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQD 359
E + VL+EL +TKR++E+LK L++ + +C A +D
Sbjct: 99 KELETLDVLEELGATKRIVEDLKQQLQK-EAMKCLATRD 136
>Glyma18g08390.1
Length = 653
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 25/148 (16%)
Query: 262 GIIDTAAPFESVKEAVSKFG-GIVD-----WKAHRIQTVERRKQVEKELEKAQEEIPEFR 315
G IDT+ PF+SVK+AVS FG G +K + + ER E +L AQ+E+ + R
Sbjct: 20 GEIDTSPPFQSVKDAVSLFGEGAFSGEKPIFKKAKPYSAERVLAKETQLHVAQKELNKLR 79
Query: 316 KRSEAAEHGKVQVLQELDSTKRLIEEL-----------KLNLERAQTEECQARQDSELAK 364
++ + AE K Q L EL+ KR +E+L +L +E + + QA+Q
Sbjct: 80 EQVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSRELAIEATEAAKSQAKQ------ 133
Query: 365 LRVEEMEQGIADHSSVAAKAQLEVAKAR 392
+ E + G+ D ++VA K +LE A R
Sbjct: 134 --LTEEKYGVPDGTNVAWKEELEAAVKR 159
>Glyma15g12720.1
Length = 560
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 68/119 (57%), Gaps = 7/119 (5%)
Query: 262 GIIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKQ---VEKE--LEKAQEEIPEFRK 316
G IDT APF+SVK AVS FG + K R +++RR +EKE L AQ E+ + +K
Sbjct: 3 GEIDTRAPFQSVKAAVSLFGEVAVSKEKR--SIKRRSSENVLEKETQLLLAQRELNKIKK 60
Query: 317 RSEAAEHGKVQVLQELDSTKRLIEELKLNLERAQTEECQARQDSELAKLRVEEMEQGIA 375
+ E+AE+ K + L ELD ++EL L + + A + +E K + +E+EQ ++
Sbjct: 61 QLESAENTKSKALSELDKANVTLQELTKKLNSVRESKQSAIEAAEAVKNQAKELEQALS 119
>Glyma08g44330.1
Length = 653
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 27/145 (18%)
Query: 262 GIIDTAAPFESVKEAVSKFG--GIVD----WKAHRIQTVERRKQVEKELEKAQEEIPEFR 315
G IDT+ PF+SVK+AVS FG D +K + + ER E +L AQ+E+ + R
Sbjct: 20 GEIDTSPPFQSVKDAVSLFGEGAFSDEKPIFKKAKPYSAERVLAKETQLHVAQKELNKLR 79
Query: 316 KRSEAAEHGKVQVLQELDSTKRLIEELKLNLE-----------RAQTEECQARQDSELAK 364
++ + AE K Q L EL+ KR +E+L ++ +CQA+Q +E K
Sbjct: 80 EQVKNAETTKAQALVELERAKRTVEDLTQKIKVISDSREIAIEATAAAKCQAKQLTE-EK 138
Query: 365 LRV---------EEMEQGIADHSSV 380
V EE+E + ++SV
Sbjct: 139 YGVPGGTNGAWKEELESAVKRYASV 163