Miyakogusa Predicted Gene

Lj5g3v0290440.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0290440.1 Non Chatacterized Hit- tr|K4BUX7|K4BUX7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,67.14,6e-19,Glycosyl hydrolase domain,NULL; Alpha-amylase
C-terminal beta-sheet dom,Alpha-amylase, C-terminal be,CUFF.52732.1
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g09090.1                                                       119   6e-28
Glyma17g36090.1                                                       107   4e-24
Glyma14g39930.1                                                        56   9e-09
Glyma08g40810.1                                                        54   5e-08
Glyma02g02450.1                                                        53   6e-08

>Glyma14g09090.1 
          Length = 90

 Score =  119 bits (299), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/67 (88%), Positives = 61/67 (91%)

Query: 2  EPIKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDLGNLLPPNVQVA 61
          EPIKK+TEIRKRNG+  TS VNILAAEADLYMAEIDNKII KIGPK DL NLLPPNVQVA
Sbjct: 24 EPIKKVTEIRKRNGVTATSRVNILAAEADLYMAEIDNKIIVKIGPKMDLVNLLPPNVQVA 83

Query: 62 TSGQDYA 68
          TSGQDYA
Sbjct: 84 TSGQDYA 90


>Glyma17g36090.1 
          Length = 414

 Score =  107 bits (266), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/70 (72%), Positives = 58/70 (82%)

Query: 2   EPIKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDLGNLLPPNVQVA 61
           E I KL+ IR ++GI   S+VNILAAEADLY+A+IDNKI  KIGPK DLGNL+PPN  VA
Sbjct: 345 EQIAKLSSIRVKHGINEKSSVNILAAEADLYVAKIDNKIFLKIGPKMDLGNLIPPNFHVA 404

Query: 62  TSGQDYAVWE 71
           TSGQDYAVWE
Sbjct: 405 TSGQDYAVWE 414


>Glyma14g39930.1 
          Length = 413

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 6/73 (8%)

Query: 2   EPIKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDLGNLLPPNVQ-- 59
           E I KL ++RKR GI+  S+V IL A+ DLY A I  K+  KIG     G+  P   +  
Sbjct: 345 EQIVKLIDVRKRQGIQSRSSVRILEAKHDLYSAVIGEKVCMKIGN----GSWCPTGREWT 400

Query: 60  VATSGQDYAVWER 72
           ++TSG +YAVW +
Sbjct: 401 LSTSGHNYAVWHK 413


>Glyma08g40810.1 
          Length = 911

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 8/72 (11%)

Query: 4   IKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDLGNLLPPN----VQ 59
           I  L  IRKRN I   ST+ I  AE D+Y A +D+K+  KIGP    G+  PP+      
Sbjct: 842 IATLISIRKRNKIHCRSTLKICKAERDVYAAIVDDKVAMKIGP----GHFEPPSGSQRWS 897

Query: 60  VATSGQDYAVWE 71
            A  G+DY +WE
Sbjct: 898 SALEGRDYKIWE 909


>Glyma02g02450.1 
          Length = 881

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 8/72 (11%)

Query: 4   IKKLTEIRKRNGIKPTSTVNILAAEADLYMAEIDNKIITKIGPKQDLGNLLPPN----VQ 59
           I  L  +RKRN I   S V I  AE D+Y A ID K+  KIGP    G+  PP+      
Sbjct: 812 IASLISLRKRNKIHCRSRVQISKAEKDVYAAIIDEKVAMKIGP----GHFEPPSDSQKWS 867

Query: 60  VATSGQDYAVWE 71
           +A  G+DY +WE
Sbjct: 868 LAIEGKDYKIWE 879