Miyakogusa Predicted Gene

Lj5g3v0255610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0255610.1 tr|Q015K9|Q015K9_OSTTA Complex 1 family protein /
LVR family protein (ISS) OS=Ostreococcus tauri
GN=,41.8,2e-16,seg,NULL; Complex1_LYR,Complex 1 LYR
protein,CUFF.52685.1
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g38060.1                                                       172   1e-43
Glyma09g04790.1                                                       170   6e-43
Glyma14g39980.1                                                        82   3e-16

>Glyma17g38060.1 
          Length = 135

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/143 (59%), Positives = 109/143 (76%), Gaps = 8/143 (5%)

Query: 1   MRGKVEKWRSIWSQIDGKARQQGCRLLHEGPDTMEELLDRHLVXXXXXXXXXXXXELLNQ 60
           M G+V++WR +W+ I   ++Q   RLLHEGPDT+EELL+RHLV            EL N+
Sbjct: 1   MMGRVQRWRCVWNCIHRPSQQ--LRLLHEGPDTVEELLERHLVKNKNEN------ELENR 52

Query: 61  RRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLRESARKEFESARFETDPEVVTR 120
           R++TS RR AL LYRD+L A+RFF WPDS G+LWRD+LRE+AR EFE +RFE+DPE+VTR
Sbjct: 53  RQLTSTRREALCLYRDILRATRFFIWPDSRGILWRDILRENARTEFEQSRFESDPEIVTR 112

Query: 121 LLIGGNEAVQSAVDKLVEKQKQQ 143
           LLIGG +A+ SA+DKL EK KQ+
Sbjct: 113 LLIGGRQALHSAIDKLAEKHKQR 135


>Glyma09g04790.1 
          Length = 135

 Score =  170 bits (430), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 84/143 (58%), Positives = 108/143 (75%), Gaps = 8/143 (5%)

Query: 1   MRGKVEKWRSIWSQIDGKARQQGCRLLHEGPDTMEELLDRHLVXXXXXXXXXXXXELLNQ 60
           M  +V++WR +W+ ID  ++Q   RLLHEGPDT+EELL+RHLV            +L NQ
Sbjct: 1   MMRRVQRWRCVWNCIDRPSQQ--LRLLHEGPDTVEELLERHLVKNKNEN------QLENQ 52

Query: 61  RRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLRESARKEFESARFETDPEVVTR 120
           R++TS RR AL LYRD+L A+R F WPDS G+LWRD+LRE+AR EFE +RFE+DPE+VTR
Sbjct: 53  RQLTSTRREALCLYRDILRATRLFIWPDSRGILWRDILRENARTEFEQSRFESDPEIVTR 112

Query: 121 LLIGGNEAVQSAVDKLVEKQKQQ 143
           LLIGG +A+ SA+DKL EK KQ+
Sbjct: 113 LLIGGRQALHSAIDKLAEKHKQR 135


>Glyma14g39980.1 
          Length = 91

 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/99 (49%), Positives = 65/99 (65%), Gaps = 10/99 (10%)

Query: 1  MRGKVEKWRSIWSQIDGKARQQGCRLLHEGPDTMEELLDRHLVXXXXXXXXXXXXELLNQ 60
          MRG+++KWR +W+ ID  ++Q   RLLHEGPDT+EELL RHLV               N+
Sbjct: 1  MRGRLQKWRCVWNCIDSPSQQ--LRLLHEGPDTVEELLKRHLVKNNNENELE------NR 52

Query: 61 RRVTSPRRGALSLYRDVLPASRFFTWPDSNGVLWRDVLR 99
          R++TS RR ALSLYRD+L A+R  +  DS  + + DVLR
Sbjct: 53 RQLTSTRREALSLYRDILRATRVVS--DSGSLSFFDVLR 89