Miyakogusa Predicted Gene

Lj5g3v0254350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0254350.1 Non Chatacterized Hit- tr|K3Z0S8|K3Z0S8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si020145,62.34,4e-19,Complex1_LYR,Complex 1 LYR protein; FAMILY NOT
NAMED,LYR motif-containing protein 2,CUFF.52670.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g38070.1                                                       142   7e-35
Glyma14g39970.1                                                       114   2e-26

>Glyma17g38070.1 
          Length = 78

 Score =  142 bits (358), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 68/77 (88%), Positives = 77/77 (100%)

Query: 1  MDLQDFLIRARVLKLFRQALRIAGRAPSSARAELRQTVRQEMENNRNCNDKQRIRYLISD 60
          MDLQDFLIRARVL+L+RQALRIAGRAPSSA+AELRQT+RQEMENNRNCNDKQRIR+LIS+
Sbjct: 1  MDLQDFLIRARVLRLYRQALRIAGRAPSSAKAELRQTIRQEMENNRNCNDKQRIRFLISE 60

Query: 61 GLERLKRLDEMLDMQGH 77
          GL++LKRLDEMLDMQG+
Sbjct: 61 GLDKLKRLDEMLDMQGY 77


>Glyma14g39970.1 
          Length = 66

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/66 (81%), Positives = 63/66 (95%)

Query: 1  MDLQDFLIRARVLKLFRQALRIAGRAPSSARAELRQTVRQEMENNRNCNDKQRIRYLISD 60
          MDLQDFL+RARVL L+RQALRI GRAPSSA+AELRQT+RQE ENNRNCND+QRIR+LIS+
Sbjct: 1  MDLQDFLLRARVLMLYRQALRITGRAPSSAKAELRQTIRQETENNRNCNDRQRIRFLISE 60

Query: 61 GLERLK 66
          GL++LK
Sbjct: 61 GLDKLK 66