Miyakogusa Predicted Gene

Lj5g3v0218110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0218110.1 Non Chatacterized Hit- tr|Q5JL26|Q5JL26_ORYSJ
Putative uncharacterized protein P0682B08.32 OS=Oryza ,40.12,9e-18,no
description,Tetratricopeptide-like helical; PCDC2 (PROGRAMMED CELL
DEATH PROTEIN
2)-RELATED,NULL;,NODE_41648_length_980_cov_119.596939.path2.1
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g10980.1                                                       346   1e-95
Glyma05g28010.1                                                       345   3e-95
Glyma18g00990.2                                                       324   4e-89
Glyma18g00990.1                                                       324   4e-89
Glyma11g37070.1                                                       316   1e-86
Glyma04g37220.1                                                       283   1e-76
Glyma06g17840.1                                                       282   3e-76
Glyma04g06170.1                                                        49   4e-06

>Glyma08g10980.1 
          Length = 391

 Score =  346 bits (888), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 172/229 (75%), Positives = 186/229 (81%), Gaps = 9/229 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGASLMAKAAI+SHARALY+LAVIQFNGSGGTKSDKDLRAGVALCARAA
Sbjct: 149 MIRFYCLQNRGSGASLMAKAAINSHARALYALAVIQFNGSGGTKSDKDLRAGVALCARAA 208

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGH+DALRE+GHCLQDGYG R+NI EGRRFL++ANARELAAV+                
Sbjct: 209 FLGHVDALRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVL--------STGAAART 260

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +W+L PQQ    SG PLLSDFG NVP P+ HPA+ FMTEWFAA    PGPGL LCS+ 
Sbjct: 261 LLSWNLQPQQLRQGSGCPLLSDFGCNVPAPDVHPASLFMTEWFAAHGGSPGPGLRLCSNA 320

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
           GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK EC AP+ER L
Sbjct: 321 GCGRPETRKHEFRRCSVCGEVNYCSRACQALDWKFRHKAEC-APVERWL 368


>Glyma05g28010.1 
          Length = 436

 Score =  345 bits (885), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/229 (73%), Positives = 185/229 (80%), Gaps = 9/229 (3%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGAS MAKAAI+SHARALY+LAVIQFNGSGGTKSDKDLRAGVALCARAA
Sbjct: 195 MIRFYCLQNRGSGASFMAKAAINSHARALYALAVIQFNGSGGTKSDKDLRAGVALCARAA 254

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGH+DA+RE+GHCLQDGYG R+NI EGRRFL++ANARELAAV+                
Sbjct: 255 FLGHVDAMRELGHCLQDGYGVRQNIAEGRRFLVQANARELAAVL--------STGAAART 306

Query: 121 XXTWSLHPQQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSHM 180
             +W+L PQQ    SG PLLSDFG NVP PE HPA+ FM EWFAA+   PGPGL LCSH 
Sbjct: 307 WLSWNLQPQQLRQGSGCPLLSDFGCNVPAPEVHPASLFMAEWFAARGGSPGPGLRLCSHA 366

Query: 181 GCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
           GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK EC +P++R L
Sbjct: 367 GCGRPETRKHEFRRCSVCGVVNYCSRACQALDWKFRHKAEC-SPVQRWL 414


>Glyma18g00990.2 
          Length = 348

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 163/230 (70%), Positives = 181/230 (78%), Gaps = 10/230 (4%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGASLMAKAA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAA
Sbjct: 104 MIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAA 163

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGHIDALRE+GHCLQDGYG + N+ EGRRFL++ANARELAAV+                
Sbjct: 164 FLGHIDALRELGHCLQDGYGVKLNVTEGRRFLVQANARELAAVL--------SAGNTKRP 215

Query: 121 XXTWSLHP-QQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSH 179
             TWS HP     L SG PL+SD+G NVP P+ HPA++FM+EWF  +   PGP + LCSH
Sbjct: 216 WLTWSHHPVTHPRLRSGCPLMSDYGCNVPAPDAHPASQFMSEWFDIRGGFPGPDMRLCSH 275

Query: 180 MGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
            GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK ECA  +ER L
Sbjct: 276 SGCGRPETRRHEFRRCSVCGLVNYCSRACQALDWKFRHKAECAT-VERWL 324


>Glyma18g00990.1 
          Length = 348

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 163/230 (70%), Positives = 181/230 (78%), Gaps = 10/230 (4%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCLQNRGSGASLMAKAA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAA
Sbjct: 104 MIRFYCLQNRGSGASLMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAA 163

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGHIDALRE+GHCLQDGYG + N+ EGRRFL++ANARELAAV+                
Sbjct: 164 FLGHIDALRELGHCLQDGYGVKLNVTEGRRFLVQANARELAAVL--------SAGNTKRP 215

Query: 121 XXTWSLHP-QQRHLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSLCSH 179
             TWS HP     L SG PL+SD+G NVP P+ HPA++FM+EWF  +   PGP + LCSH
Sbjct: 216 WLTWSHHPVTHPRLRSGCPLMSDYGCNVPAPDAHPASQFMSEWFDIRGGFPGPDMRLCSH 275

Query: 180 MGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
            GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK ECA  +ER L
Sbjct: 276 SGCGRPETRRHEFRRCSVCGLVNYCSRACQALDWKFRHKAECAT-VERWL 324


>Glyma11g37070.1 
          Length = 362

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 161/234 (68%), Positives = 181/234 (77%), Gaps = 14/234 (5%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           +IRFYCLQNRGSGA+LMAKAA++SHA ALYSLAVIQFNGSGGTK+DKDLRAGVALCARAA
Sbjct: 115 LIRFYCLQNRGSGAALMAKAAMNSHAPALYSLAVIQFNGSGGTKNDKDLRAGVALCARAA 174

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
           FLGHIDALRE+GHCLQDGYG ++N+ EGRRFL++AN RELAAV+                
Sbjct: 175 FLGHIDALRELGHCLQDGYGVKQNVTEGRRFLVQANVRELAAVL--------SAGNNKRP 226

Query: 121 XXTWSL----HPQQR-HLPSGAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLS 175
             TWS     HP+ R    SG PLLSD+G NVP PE HPA++FM+EWF  +   P  G+ 
Sbjct: 227 WLTWSHQPVPHPRLRSETGSGCPLLSDYGCNVPAPEVHPASQFMSEWFDIRGGFPSAGMR 286

Query: 176 LCSHMGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPMERLL 229
           LCS  GCGRPETR  EFRRCSVCG VNYCSRACQALDWK RHK EC AP+ER L
Sbjct: 287 LCSQSGCGRPETRRHEFRRCSVCGVVNYCSRACQALDWKFRHKAEC-APVERWL 339


>Glyma04g37220.1 
          Length = 344

 Score =  283 bits (725), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 146/231 (63%), Positives = 167/231 (72%), Gaps = 10/231 (4%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NRGSG SLMAKAA+  HA ALYSLAVIQFNGSGG+K DKDLRAGVAL ARA+
Sbjct: 100 MIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARAS 159

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG R+N+ EGRR L++AN RELA V+                
Sbjct: 160 LLGHIDALRELGHCLQDGYGVRQNVTEGRRLLVQANVRELAYVL----RAVAPSRCYETS 215

Query: 121 XXTWSLHPQQRHLPS-----GAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLS 175
             TW     QR+  +       PLLSD+G+NV  PE  PAN F+ EWF +       GL 
Sbjct: 216 LLTWRALRCQRNNNNNNAVVACPLLSDYGYNVAAPEVQPANWFLREWFESGKGKLEEGLR 275

Query: 176 LCSHMGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPME 226
           LC+H+GCGRPETR  EFRRCSVCG VNYCSR CQALDWKLRHK+EC +P+E
Sbjct: 276 LCAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKMEC-SPVE 325


>Glyma06g17840.1 
          Length = 340

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 143/230 (62%), Positives = 168/230 (73%), Gaps = 5/230 (2%)

Query: 1   MIRFYCLQNRGSGASLMAKAAISSHARALYSLAVIQFNGSGGTKSDKDLRAGVALCARAA 60
           MIRFYCL+NRGSG SLMAKAA+  HA ALYSLAVIQFNGSGG+K DKDLRAGVAL ARA+
Sbjct: 100 MIRFYCLKNRGSGLSLMAKAAMKLHAPALYSLAVIQFNGSGGSKRDKDLRAGVALSARAS 159

Query: 61  FLGHIDALREIGHCLQDGYGCRKNIIEGRRFLIEANARELAAVMXXXXXXXXXXXXXXXX 120
            LGHIDALRE+GHCLQDGYG R+N+ EGRR L++AN RELA V+                
Sbjct: 160 LLGHIDALRELGHCLQDGYGVRQNVTEGRRLLVQANVRELAYVLRAVAPPSRCCDESSSL 219

Query: 121 XXTWSLHPQQRHLPS----GAPLLSDFGWNVPEPEPHPANRFMTEWFAAKDDVPGPGLSL 176
               +L  Q+++  +      PLLSD+G++V  PE  PAN F+ EWF +       GL L
Sbjct: 220 LTWGALRCQRKNNNAVSSLACPLLSDYGYSVAPPEVQPANWFLREWFESGKGKLEEGLRL 279

Query: 177 CSHMGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVECAAPME 226
           C+H+GCGRPETR  EFRRCSVCG VNYCSR CQALDWKLRHK+EC +P+E
Sbjct: 280 CAHIGCGRPETRPHEFRRCSVCGKVNYCSRGCQALDWKLRHKIEC-SPVE 328


>Glyma04g06170.1 
          Length = 742

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 3/50 (6%)

Query: 172 PGLSLCSHMGCGRPETRNREFRRCSVCGTVNYCSRACQALDWKLRHKVEC 221
           PGL L  H  C     RN   ++CS C +V YCS+ACQ + WK  HKV C
Sbjct: 51  PGL-LMDHSLCA--VCRNPANKKCSRCKSVRYCSQACQQMHWKSEHKVRC 97