Miyakogusa Predicted Gene

Lj5g3v0186680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0186680.1 Non Chatacterized Hit- tr|F6I100|F6I100_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.98,6e-18,seg,NULL; Skp1 dimerisation domain-like,SKP1
component, dimerisation; POZ domain,BTB/POZ fold; no de,CUFF.52628.1
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g36850.2                                                        97   5e-21
Glyma02g05120.1                                                        97   6e-21
Glyma11g08440.1                                                        96   1e-20
Glyma16g23230.1                                                        91   3e-19
Glyma01g36850.1                                                        84   4e-17
Glyma14g40030.1                                                        77   5e-15
Glyma15g25090.1                                                        65   2e-11
Glyma04g16940.1                                                        63   7e-11
Glyma15g25120.1                                                        56   8e-09
Glyma15g37910.1                                                        47   4e-06

>Glyma01g36850.2 
          Length = 155

 Score = 97.1 bits (240), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 71/129 (55%), Gaps = 12/129 (9%)

Query: 3   STARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVIQY 59
           S+A+KITLKSSDG           L SQTIK MI    A SGI  L +VT  ILAKVI+Y
Sbjct: 2   SSAKKITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADSGI-PLPNVTSKILAKVIEY 59

Query: 60  CNKHSSG-------SENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQM 112
           C KH          SE++L+ WDADFVKVD+ TLFD                   TVA M
Sbjct: 60  CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 113 MKGMNPQEI 121
           +KG  P+EI
Sbjct: 120 IKGKTPEEI 128


>Glyma02g05120.1 
          Length = 155

 Score = 96.7 bits (239), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 63/131 (48%), Positives = 72/131 (54%), Gaps = 13/131 (9%)

Query: 1   MASTARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVI 57
           MAST +KITLKSSDG           + SQTIK MI    A SGI  L +VT  ILAKVI
Sbjct: 1   MAST-KKITLKSSDGEAFEVEEAVA-VESQTIKHMIEDNCADSGI-PLPNVTSKILAKVI 57

Query: 58  QYCNKH-------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVA 110
           +YC KH          SE+EL+ WDADFVKVD+ TLFD                   TVA
Sbjct: 58  EYCKKHVEANCADEKPSEDELKAWDADFVKVDQATLFDLILAANYLNIKSLLDLTCQTVA 117

Query: 111 QMMKGMNPQEI 121
            M+KG  P+EI
Sbjct: 118 DMIKGKTPEEI 128


>Glyma11g08440.1 
          Length = 155

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/129 (46%), Positives = 71/129 (55%), Gaps = 12/129 (9%)

Query: 3   STARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVIQY 59
           S+A+KITLKSSDG           L SQTIK MI    A SGI  L +VT  ILAKVI+Y
Sbjct: 2   SSAKKITLKSSDGEAFEVEEAVA-LESQTIKHMIEDDCADSGI-PLPNVTSKILAKVIEY 59

Query: 60  CNKHSSG-------SENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVAQM 112
           C KH          SE++L+ WDA+FVKVD+ TLFD                   TVA M
Sbjct: 60  CKKHVEAANPEDKPSEDDLKAWDAEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADM 119

Query: 113 MKGMNPQEI 121
           +KG  P+EI
Sbjct: 120 IKGKTPEEI 128


>Glyma16g23230.1 
          Length = 155

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 69/131 (52%), Gaps = 13/131 (9%)

Query: 1   MASTARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVI 57
           MAST +KITLKSSDG           L SQTIK MI    A SGI  L +VT  ILAKVI
Sbjct: 1   MAST-KKITLKSSDGEAFEVEEAVA-LESQTIKHMIEDDCADSGI-PLPNVTSKILAKVI 57

Query: 58  QYCNKH-------SSGSENELRQWDADFVKVDRDTLFDXXXXXXXXXXXXXXXXXVHTVA 110
           +YC KH          SE+ L+ WD DFV VD+ TLFD                   TVA
Sbjct: 58  EYCKKHVEANSADEKPSEDVLKAWDVDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVA 117

Query: 111 QMMKGMNPQEI 121
            M+KG  P+EI
Sbjct: 118 DMIKGKTPEEI 128


>Glyma01g36850.1 
          Length = 179

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/96 (54%), Positives = 60/96 (62%), Gaps = 12/96 (12%)

Query: 3  STARKITLKSSDGXXXXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVIQY 59
          S+A+KITLKSSDG           L SQTIK MI    A SGI  L +VT  ILAKVI+Y
Sbjct: 2  SSAKKITLKSSDGEAFEVDEAVA-LESQTIKHMIEDDCADSGI-PLPNVTSKILAKVIEY 59

Query: 60 CNKHSSG-------SENELRQWDADFVKVDRDTLFD 88
          C KH          SE++L+ WDADFVKVD+ TLFD
Sbjct: 60 CKKHVEAANPEDKPSEDDLKAWDADFVKVDQATLFD 95


>Glyma14g40030.1 
          Length = 98

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/96 (52%), Positives = 57/96 (59%), Gaps = 12/96 (12%)

Query: 4  TARKITLKSSDGXX-XXXXXXXXXLHSQTIKDMIN---AHSGIVALSDVTGNILAKVIQY 59
          + +KITLKSSDG            + SQTIK MI    A SGI  L +VT  ILAKVI Y
Sbjct: 1  STKKITLKSSDGETFEVEEAVAVAVESQTIKLMIEDNCADSGI-PLPNVTSKILAKVIDY 59

Query: 60 CNKH-------SSGSENELRQWDADFVKVDRDTLFD 88
          C KH          SE+EL+ WDADFVKVD+ TLFD
Sbjct: 60 CKKHVEANCADEKPSEDELKAWDADFVKVDQATLFD 95


>Glyma15g25090.1 
          Length = 98

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/97 (45%), Positives = 53/97 (54%), Gaps = 11/97 (11%)

Query: 1  MASTARKITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQ 58
          MA T + ITLKS D            + SQ IK MI  N     V L + T  ILA+VI+
Sbjct: 1  MALT-KNITLKSLD-VEAFEVEEAVAVKSQMIKHMIEDNYVDNKVPLPNATNKILAEVIK 58

Query: 59 YCNKH-------SSGSENELRQWDADFVKVDRDTLFD 88
          YC KH          SE+EL+ W+ADFVKVD+ TLFD
Sbjct: 59 YCKKHVDANCTDEKPSEDELKAWEADFVKVDQVTLFD 95


>Glyma04g16940.1 
          Length = 88

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 9/68 (13%)

Query: 30 QTIKDMI--NAHSGIVALSDVTGNILAKVIQYCNKHSSG-------SENELRQWDADFVK 80
          QTI+ MI  N   G + L +VT  IL KVI+YC KH          SE+EL+ WD DFVK
Sbjct: 18 QTIEHMIEDNCVDGEIPLPNVTSKILVKVIKYCKKHVEANYVDENLSEDELKAWDDDFVK 77

Query: 81 VDRDTLFD 88
          +D+ TLFD
Sbjct: 78 LDQATLFD 85


>Glyma15g25120.1 
          Length = 82

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 10/82 (12%)

Query: 8  ITLKSSDGXXXXXXXXXXXLHSQTIKDMI--NAHSGIVALSDVTGNILAKVIQYCNKH-- 63
          ITLKS DG           + SQ IK MI  N     V L + T  ILA+VI+YC KH  
Sbjct: 2  ITLKSLDGEAFEVEEAVA-VKSQMIKHMIEDNCADNRVPLPNATNKILAEVIKYCKKHVD 60

Query: 64 -----SSGSENELRQWDADFVK 80
                  SE+EL+ W+ADFVK
Sbjct: 61 ANCIDEKPSEDELKAWEADFVK 82


>Glyma15g37910.1 
          Length = 97

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 30/50 (60%), Gaps = 9/50 (18%)

Query: 46 SDVTGNILAKVIQYCNKH-------SSGSENELRQWDADFVKVDRDTLFD 88
           D T N  AKVIQYC KH          SE++L+ WD DFVKV + TLFD
Sbjct: 35 DDCTDN--AKVIQYCKKHIEAANPEDKPSEDDLKTWDTDFVKVGQATLFD 82