Miyakogusa Predicted Gene

Lj5g3v0122140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0122140.1 Non Chatacterized Hit- tr|I3S398|I3S398_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,96.77,0,SUBFAMILY
NOT NAMED,NULL; 60S RIBOSOMAL PROTEIN L14,NULL;
Ribosomal_L14e,Ribosomal protein L14; no
d,NODE_22634_length_378_cov_1010.415344.path1.1
         (124 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g00680.1                                                       221   2e-58
Glyma10g00680.1                                                       220   2e-58
Glyma10g32580.1                                                       220   3e-58
Glyma20g35000.1                                                       217   3e-57
Glyma20g35000.2                                                       211   1e-55
Glyma03g06380.1                                                       182   7e-47
Glyma09g17000.1                                                       157   2e-39
Glyma14g19890.1                                                       122   7e-29
Glyma16g08910.1                                                       119   8e-28
Glyma14g25230.1                                                        65   1e-11

>Glyma02g00680.1 
          Length = 133

 Score =  221 bits (563), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 107/124 (86%), Positives = 117/124 (94%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRVA +NYGK+YGRLVVIVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAGA 120
           DIKR+PKKKDLI AMEAADVKN+WEKSSWGRKLIV+KRRASLNDFDRFKIMLAKIKRA  
Sbjct: 61  DIKRIPKKKDLIQAMEAADVKNRWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAV 120

Query: 121 VRTE 124
           VR E
Sbjct: 121 VRQE 124


>Glyma10g00680.1 
          Length = 132

 Score =  220 bits (561), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 106/124 (85%), Positives = 117/124 (94%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRVA +NYGK+YGRLV+IVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVAQINYGKEYGRLVIIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAGA 120
           DIKR+PKKKDLI AMEAADVKN+WEKSSWGRKLIV+KRRASLNDFDRFKIMLAKIKRA  
Sbjct: 61  DIKRIPKKKDLIQAMEAADVKNRWEKSSWGRKLIVQKRRASLNDFDRFKIMLAKIKRAAV 120

Query: 121 VRTE 124
           VR E
Sbjct: 121 VRQE 124


>Glyma10g32580.1 
          Length = 132

 Score =  220 bits (560), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 108/124 (87%), Positives = 116/124 (93%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRVA +NYGK+YGRLVVIVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAGA 120
           DIKRVPKKKDL+ AME ADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRA  
Sbjct: 61  DIKRVPKKKDLVKAMEDADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAAV 120

Query: 121 VRTE 124
           VR E
Sbjct: 121 VRQE 124


>Glyma20g35000.1 
          Length = 132

 Score =  217 bits (552), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 106/124 (85%), Positives = 115/124 (92%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRVA +NYGK+YGRLVVIVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAGA 120
           DIKRVPKKKDL+ AME ADVK KWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK+A  
Sbjct: 61  DIKRVPKKKDLVKAMEDADVKTKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKKAAV 120

Query: 121 VRTE 124
           VR E
Sbjct: 121 VRQE 124


>Glyma20g35000.2 
          Length = 131

 Score =  211 bits (538), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 106/124 (85%), Positives = 114/124 (91%), Gaps = 1/124 (0%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRVA +NYGK+YGRLVVIVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIKRAGA 120
           DIKRVPKKKDL+ AME ADVK KWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK A  
Sbjct: 61  DIKRVPKKKDLVKAMEDADVKTKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK-AAV 119

Query: 121 VRTE 124
           VR E
Sbjct: 120 VRQE 123


>Glyma03g06380.1 
          Length = 114

 Score =  182 bits (462), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 93/116 (80%), Positives = 103/116 (88%), Gaps = 8/116 (6%)

Query: 1   MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKI 60
           MPFKR+VE+GRV+ +NYGK+YGRLVVIVD+IDQNRAL+DAPDM RSQ+N KRLSLTDIKI
Sbjct: 1   MPFKRYVEIGRVSQINYGKEYGRLVVIVDVIDQNRALVDAPDMVRSQVNFKRLSLTDIKI 60

Query: 61  DIKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK 116
           DIKRVPKKKDL+ AME        +KSSWGRKLIVRK RASLNDFDRFKIMLAKIK
Sbjct: 61  DIKRVPKKKDLVKAME--------DKSSWGRKLIVRKIRASLNDFDRFKIMLAKIK 108


>Glyma09g17000.1 
          Length = 171

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 85/115 (73%), Positives = 94/115 (81%), Gaps = 9/115 (7%)

Query: 2   PFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKID 61
           P   +VE+GRVA +NY K+YGRLVVIVD+IDQNR  +  P   +SQ+N KRLSLTDIKID
Sbjct: 25  PRCMYVEIGRVAQINYDKEYGRLVVIVDVIDQNR--VTPPPPPKSQVNFKRLSLTDIKID 82

Query: 62  IKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK 116
           IKRVPKKKDL+ AME  DVK     SSWGRKLIVRKRRASLNDFDRFKIMLAKIK
Sbjct: 83  IKRVPKKKDLVKAME--DVK-----SSWGRKLIVRKRRASLNDFDRFKIMLAKIK 130


>Glyma14g19890.1 
          Length = 98

 Score =  122 bits (307), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 60/78 (76%), Positives = 68/78 (87%), Gaps = 2/78 (2%)

Query: 1  MPFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNR--ALIDAPDMERSQMNLKRLSLTDI 58
          MPFKR+VE+GRVA +NYGK+YGRLVVIVD+IDQNR   +   PDM RSQ+N KRLSLTDI
Sbjct: 1  MPFKRYVEIGRVAQINYGKEYGRLVVIVDVIDQNRKKMMAHHPDMVRSQVNFKRLSLTDI 60

Query: 59 KIDIKRVPKKKDLIAAME 76
          KIDIKRVPKKKDL+ AME
Sbjct: 61 KIDIKRVPKKKDLVKAME 78


>Glyma16g08910.1 
          Length = 105

 Score =  119 bits (298), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 80/112 (71%), Gaps = 14/112 (12%)

Query: 5   RFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKIDIKR 64
           R+V++ RVA +NYGK+YG LVVIVD+ID NRALIDAPDM RSQ+N KRLSLTDIKIDIKR
Sbjct: 2   RYVQIRRVAQINYGKEYGMLVVIVDVIDHNRALIDAPDMVRSQVNFKRLSLTDIKIDIKR 61

Query: 65  VPKKKDLIAAMEAADVKNKWEKSSWGRKLIVRKRRASLNDFDRFKIMLAKIK 116
           VPKKK L+ AME         + S GR   V     SL     FKIMLAKIK
Sbjct: 62  VPKKKGLVKAME------DMLRPSEGR---VHGAGNSL-----FKIMLAKIK 99


>Glyma14g25230.1 
          Length = 113

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 12/117 (10%)

Query: 2   PFKRFVEVGRVALVNYGKDYGRLVVIVDIIDQNRALIDAPDMERSQMNLKRLSLTDIKID 61
           PFKR+V++GRVA +NYGK+YGRL+VIVD+IDQN+     P           + L      
Sbjct: 1   PFKRYVKIGRVAQINYGKEYGRLIVIVDVIDQNKVTPPPPPKFLPLFTFTHIHLHAFLEL 60

Query: 62  IKRVPKKKDLIAAMEAADVKNKWEKSSWGRKLIVR--KRRASLNDFDRFKIMLAKIK 116
           +  +     ++ + +          S  G   ++R  +RR        FKIMLAKIK
Sbjct: 61  VLALLIILIILGSCQ----------SHGGCCFMLRPSERRVYGAGNSLFKIMLAKIK 107