Miyakogusa Predicted Gene

Lj5g3v0112040.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0112040.1 Non Chatacterized Hit- tr|I1GQK0|I1GQK0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,70.59,2e-19,
,NODE_17573_length_663_cov_119.892914.path2.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g07830.1                                                       228   2e-60
Glyma1784s00200.1                                                     228   2e-60

>Glyma14g07830.1 
          Length = 250

 Score =  228 bits (580), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 123/160 (76%), Positives = 130/160 (81%), Gaps = 14/160 (8%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGP--MNVRCIRSEFLGLNGGGSKAKQRGFLSCDV 55
           M SVQGP VCPS   K  GFCS+PM+G   MNVR IRSEF GLNG  +K    GFLSC +
Sbjct: 1   MSSVQGPVVCPSVRAKQVGFCSIPMIGAVKMNVRRIRSEFWGLNGAKAKP---GFLSCHI 57

Query: 56  NTRKCWTVVRCSFNPSSSNDS----ENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDG 111
           NTRKC TV  C+FN S SNDS    +NF EKDE+YV SSVIEAVEVKSGADGFIIKMRDG
Sbjct: 58  NTRKCKTV-HCTFN-SPSNDSGSTADNFNEKDEDYVISSVIEAVEVKSGADGFIIKMRDG 115

Query: 112 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 155


>Glyma1784s00200.1 
          Length = 209

 Score =  228 bits (580), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 122/160 (76%), Positives = 130/160 (81%), Gaps = 14/160 (8%)

Query: 1   MGSVQGPAVCPS---KLAGFCSLPMMGP--MNVRCIRSEFLGLNGGGSKAKQRGFLSCDV 55
           M SVQGP VCPS   K  GFCS+PM+G   MNVR IRSEF GLNG  +K    GFLSC +
Sbjct: 1   MSSVQGPVVCPSVRAKQVGFCSIPMIGAVKMNVRRIRSEFWGLNGAKAKP---GFLSCRI 57

Query: 56  NTRKCWTVVRCSFNPSSSNDS----ENFIEKDEEYVNSSVIEAVEVKSGADGFIIKMRDG 111
           NTRK +  V C+FN S SNDS    +NF EKDE+YVNSSVIEAVEVKSGADGFIIKMRDG
Sbjct: 58  NTRK-YKTVHCTFN-SPSNDSGSTADNFNEKDEDYVNSSVIEAVEVKSGADGFIIKMRDG 115

Query: 112 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 151
           RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV
Sbjct: 116 RHLRCVHNNPQGGHLPDYAPHPAIVLKMEDGTGLLLPIIV 155