Miyakogusa Predicted Gene

Lj5g3v0110950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0110950.1 tr|A2Q3R6|A2Q3R6_MEDTR Poly(ADP-ribose)
polymerase, catalytic region OS=Medicago truncatula
GN=MTR_7,58.57,6e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PARP_CATALYTIC,Poly(ADP-ribose) polymeras,CUFF.52590.1
         (137 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g01900.6                                                       124   4e-29
Glyma01g01900.5                                                       124   4e-29
Glyma01g01900.4                                                       122   8e-29
Glyma01g01900.3                                                       122   8e-29
Glyma01g01900.2                                                       122   8e-29
Glyma01g01900.1                                                       122   8e-29
Glyma09g34000.1                                                       119   1e-27
Glyma09g34000.2                                                       119   1e-27
Glyma09g34000.3                                                       119   1e-27
Glyma17g09720.1                                                        61   4e-10
Glyma08g12960.1                                                        58   3e-09
Glyma05g02210.1                                                        58   4e-09
Glyma04g35560.1                                                        51   4e-07

>Glyma01g01900.6 
          Length = 511

 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 22/123 (17%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN-----------WLTRL 108
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN           W  R 
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDNVSYLIFEFCISWFPRF 504

Query: 109 LAL 111
           L L
Sbjct: 505 LML 507


>Glyma01g01900.5 
          Length = 511

 Score =  124 bits (310), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 22/123 (17%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN-----------WLTRL 108
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN           W  R 
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDNVSYLIFEFCISWFPRF 504

Query: 109 LAL 111
           L L
Sbjct: 505 LML 507


>Glyma01g01900.4 
          Length = 583

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDN 488


>Glyma01g01900.3 
          Length = 583

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDN 488


>Glyma01g01900.2 
          Length = 583

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDN 488


>Glyma01g01900.1 
          Length = 583

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 73/104 (70%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEIL+PG G    QF  S+ +YDNGVD I+CPRYY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 395 MGNMEILQPGTG----QFHPSSCEYDNGVDSIECPRYYVVWNMNMNTHIYPEFVVSFKVS 450

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 451 SDAEGHFCGSEGK------NVSGVNSACQGPHGLLHSESSTVDN 488


>Glyma09g34000.1 
          Length = 446

 Score =  119 bits (298), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEILRPG      QF  S+ +YDNGVD I+CP+YY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 258 MGNMEILRPG----TDQFHPSSCEYDNGVDAIECPQYYVVWNMNMNTHIYPEFVVSFKVS 313

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 314 SDAEGHFCGSEGK------NVSGVNTACDGPHGLLNSESSTVDN 351


>Glyma09g34000.2 
          Length = 371

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEILRPG      QF  S+ +YDNGVD I+CP+YY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 258 MGNMEILRPG----TDQFHPSSCEYDNGVDAIECPQYYVVWNMNMNTHIYPEFVVSFKVS 313

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 314 SDAEGHFCGSEGK------NVSGVNTACDGPHGLLNSESSTVDN 351


>Glyma09g34000.3 
          Length = 280

 Score =  119 bits (297), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 11/104 (10%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           MGNMEILRPG      QF  S+ +YDNGVD I+CP+YY +WNMN+NTHIYPEFV+SFKVS
Sbjct: 92  MGNMEILRPG----TDQFHPSSCEYDNGVDAIECPQYYVVWNMNMNTHIYPEFVVSFKVS 147

Query: 61  RDVEGHFCGNVGEINDSRANYSGNSLATHGSSDIFQA-TSLVDN 103
            D EGHFCG+ G+      N SG + A  G   +  + +S VDN
Sbjct: 148 SDAEGHFCGSEGK------NVSGVNTACDGPHGLLNSESSTVDN 185


>Glyma17g09720.1 
          Length = 322

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 6/73 (8%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           +G  E+    +  +++Q +SS+ ++D+GVDD+  P+ Y IW   INTH+ PE+V+SF+  
Sbjct: 163 LGKTEL----VPRDSNQCRSSSEEFDSGVDDLSNPKEYVIWCNQINTHVLPEYVLSFRFP 218

Query: 61  RDVEGHFCGNVGE 73
             ++GH    +GE
Sbjct: 219 SPLKGHV--KIGE 229


>Glyma08g12960.1 
          Length = 199

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 4/57 (7%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISF 57
           +G +E +  G    + Q Q S+ +YD GVDDI  PR +TIW   +NTHI+P ++I F
Sbjct: 146 LGKVEAVHAG----SKQSQPSSKQYDTGVDDISAPRRHTIWTAYLNTHIHPNYIICF 198


>Glyma05g02210.1 
          Length = 328

 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 4/65 (6%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           +G  E++  G    + Q +SS+ ++D+GVDD+  P+ Y IW   INTH+ PE+V+SF++ 
Sbjct: 155 LGKTEVVPRG----SYQCRSSSQEFDSGVDDLSNPKEYVIWCNQINTHVLPEYVLSFRLP 210

Query: 61  RDVEG 65
             ++G
Sbjct: 211 SPLKG 215


>Glyma04g35560.1 
          Length = 330

 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 1   MGNMEILRPGIGTNASQFQSSNSKYDNGVDDIQCPRYYTIWNMNINTHIYPEFVISFKVS 60
           +G  EI+R     N      S  +YD+GVD    P  Y IW+  +NTH+ P +V+SF+VS
Sbjct: 174 LGRSEIVR----DNTEHCYPSCEEYDSGVDSFSGPTKYIIWSNRMNTHVLPAYVVSFRVS 229