Miyakogusa Predicted Gene

Lj5g3v0108330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0108330.1 tr|B1YJM5|B1YJM5_EXIS2 Ornithine
carbamoyltransferase, catabolic OS=Exiguobacterium sibiricum
(strai,54.55,2e-19,AOTCASE,Aspartate/ornithine carbamoyltransferase;
seg,NULL; Aspartate/ornithine carbamoyltransferase,CUFF.52553.1
         (78 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g03360.1                                                       126   6e-30
Glyma04g03280.1                                                       124   2e-29

>Glyma06g03360.1 
          Length = 358

 Score =  126 bits (316), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 56/78 (71%), Positives = 64/78 (82%)

Query: 1   MGQXXXXXXXXXXFKGFQVDQSLMDIAGSKALFMHCLPAEKGVEVTEEVIEGPKSIIFPQ 60
           MGQ          FKGFQV+Q+LMD+AGSKA FMHCLPAE+GVEVT+EVIE P SI+FPQ
Sbjct: 281 MGQKEEAEYRRQVFKGFQVNQNLMDLAGSKAFFMHCLPAERGVEVTDEVIEAPNSIVFPQ 340

Query: 61  AENRLHAQNGIMLHVLGK 78
           AENR+HAQN +MLHVLGK
Sbjct: 341 AENRMHAQNAVMLHVLGK 358


>Glyma04g03280.1 
          Length = 358

 Score =  124 bits (311), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/78 (70%), Positives = 63/78 (80%)

Query: 1   MGQXXXXXXXXXXFKGFQVDQSLMDIAGSKALFMHCLPAEKGVEVTEEVIEGPKSIIFPQ 60
           MGQ          FKGFQV+Q+LMD+AGSKA FMHCLPAE+GVEVT+EVIE P SI+FPQ
Sbjct: 281 MGQKEEAEYRRQAFKGFQVNQNLMDLAGSKAFFMHCLPAERGVEVTDEVIEAPNSIVFPQ 340

Query: 61  AENRLHAQNGIMLHVLGK 78
           AENR+HAQN +MLHVL K
Sbjct: 341 AENRMHAQNAVMLHVLAK 358