Miyakogusa Predicted Gene

Lj5g3v0104830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0104830.1 tr|G7IWS7|G7IWS7_MEDTR F-box protein OS=Medicago
truncatula GN=MTR_3g030590 PE=4
SV=1,39.6,3e-16,UBN2_3,NULL,CUFF.52538.1
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g35650.1                                                       117   2e-27
Glyma02g14000.1                                                        90   5e-19
Glyma10g21320.1                                                        75   2e-14
Glyma18g27720.1                                                        75   2e-14
Glyma08g26190.1                                                        75   2e-14
Glyma02g37220.1                                                        62   2e-10
Glyma07g34840.1                                                        59   8e-10
Glyma15g17820.1                                                        54   3e-08
Glyma17g16230.1                                                        47   5e-06

>Glyma06g35650.1 
          Length = 793

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 69/103 (66%)

Query: 1   MMGSNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGENPTEAQRTAHK 60
           M  SNGN PA++P+  GKN+D WC++M+VIF FQ+V + V  G  +   NPT+AQ+ AH+
Sbjct: 1   MASSNGNFPASMPVLKGKNYDDWCAQMKVIFRFQDVTEVVQEGVQEPDRNPTDAQKVAHR 60

Query: 61  AAKKNDQKALFYIHQCVNSKVFDKISESKTSKEAWDLLTKYYG 103
              K D K LF IHQCV++  F KI  + T+K+AWD L K Y 
Sbjct: 61  DLMKRDAKTLFIIHQCVDADNFQKIRSADTAKKAWDTLEKSYA 103


>Glyma02g14000.1 
          Length = 1050

 Score = 90.1 bits (222), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 52/75 (69%)

Query: 1   MMGSNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGENPTEAQRTAHK 60
           M  SNGN P ++P+  GKN+D WC++M+VIF FQ+V + +  G  +  +NPT+AQ+ AH+
Sbjct: 31  MASSNGNFPTSMPVLKGKNYDDWCAQMKVIFRFQDVTEVMQEGVQEPDKNPTDAQKVAHR 90

Query: 61  AAKKNDQKALFYIHQ 75
              K D KALF IHQ
Sbjct: 91  DLMKRDTKALFIIHQ 105


>Glyma10g21320.1 
          Length = 1348

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 1/96 (1%)

Query: 4  SNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGE-NPTEAQRTAHKAA 62
          +NG  P  +P+    N+D W  KM+ +   Q+V D V+ G+ +  E + ++  +   K +
Sbjct: 2  ANGGFPFQMPMLTKNNYDNWSIKMKALLGAQDVWDIVENGFEEQDEASLSQGVKETLKES 61

Query: 63 KKNDQKALFYIHQCVNSKVFDKISESKTSKEAWDLL 98
          +K D+KALF I+Q V+   F+KIS + T+KEAWD L
Sbjct: 62 RKRDKKALFLIYQSVDEDTFEKISNATTTKEAWDKL 97


>Glyma18g27720.1 
          Length = 1252

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 1/96 (1%)

Query: 4  SNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGE-NPTEAQRTAHKAA 62
          +NG  P  +P+    N+D W  KM+ +   Q+V D V+ G+ +  E + ++  +   K +
Sbjct: 2  ANGGFPFQMPMLTKNNYDNWSIKMKALLGAQDVWDIVENGFEEQDEASLSQGVKETLKES 61

Query: 63 KKNDQKALFYIHQCVNSKVFDKISESKTSKEAWDLL 98
          +K D+KALF I+Q V+   F+KIS + T+KEAWD L
Sbjct: 62 RKRDKKALFLIYQSVDEDTFEKISNATTAKEAWDKL 97


>Glyma08g26190.1 
          Length = 1269

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 1/96 (1%)

Query: 4  SNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGE-NPTEAQRTAHKAA 62
          +NG  P  +P+    N+D W  KM+ +   Q+V D V+ G+ +  E + ++  +   K +
Sbjct: 2  ANGGFPFQMPMLTKNNYDNWSIKMKALLGAQDVWDIVENGFEEQDEVSLSQGVKETLKES 61

Query: 63 KKNDQKALFYIHQCVNSKVFDKISESKTSKEAWDLL 98
          +K D+KALF I+Q V+   F+KIS + T+KEAWD L
Sbjct: 62 RKRDKKALFLIYQSVDEDTFEKISNATTAKEAWDKL 97


>Glyma02g37220.1 
          Length = 914

 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 19/98 (19%)

Query: 6   GNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGENPTEAQRTAHKAAKKN 65
           GN+PA L + D K          V+ N         G  A+  E+ TEA R A+K +KK 
Sbjct: 289 GNVPAQLLVLDRK----------VVKN---------GVAAEPAEHATEAVRNAYKDSKKK 329

Query: 66  DQKALFYIHQCVNSKVFDKISESKTSKEAWDLLTKYYG 103
           D K +F++HQ VN   F+ IS++ ++K+AWD L K Y 
Sbjct: 330 DAKTIFFLHQSVNDVNFNLISKATSAKQAWDKLEKCYA 367


>Glyma07g34840.1 
          Length = 1562

 Score = 59.3 bits (142), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 11  NLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYAQLGENPTEAQRTAHKAAKKNDQ--- 67
           ++PIF+G+N+D W  KM   F+ Q++ D V+ G+  +  + +    +  K  KKN Q   
Sbjct: 11  SIPIFNGENYDFWRVKMETYFSSQDLWDIVEEGFT-IPADTSALNASQEKELKKNKQKNS 69

Query: 68  KALFYIHQCVNSKVFDKISESKTSKEAWDLLTKYY 102
           KALF + Q V   +F  I  +KT+KE W+ L + +
Sbjct: 70  KALFTLQQAVTDPIFPIIMGAKTAKEVWNTLQEEF 104


>Glyma15g17820.1 
          Length = 629

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 2/104 (1%)

Query: 1   MMGSNGNIPANLPIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGYA--QLGENPTEAQRTA 58
           M G        LPIFDG+N+D W  KM+      ++ D V+  Y    L ENPT  Q   
Sbjct: 1   MEGETSFSHITLPIFDGENYDLWEVKMQSYMESLDLWDGVEEDYEIYPLPENPTMTQIKN 60

Query: 59  HKAAKKNDQKALFYIHQCVNSKVFDKISESKTSKEAWDLLTKYY 102
           HK  K    KA   +   V+  +F +I   K+ K  WD L + Y
Sbjct: 61  HKERKMKKTKARSCLFTGVSKMIFIRIMTLKSPKAIWDYLKEEY 104


>Glyma17g16230.1 
          Length = 853

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)

Query: 13  PIFDGKNWDQWCSKMRVIFNFQEVGDYVDGGY--AQLGENPTEAQRTAHKAAKKNDQKAL 70
           P+FDG N+  W ++M       ++ + V+  Y    L  NPT AQ    K  K    KA 
Sbjct: 90  PVFDGDNYQIWATRMEAHLEANDLWEAVEEDYEVLPLPTNPTMAQIKNQKERKARKSKAR 149

Query: 71  FYIHQCVNSKVFDKISESKTSKEAWDLLTKYY 102
             +   V+ ++F +I   K++ E W  L   Y
Sbjct: 150 ASLFAAVSKEIFTRIMTIKSAYEIWSFLKNEY 181