Miyakogusa Predicted Gene

Lj5g3v0087400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0087400.1 Non Chatacterized Hit- tr|Q650V5|Q650V5_ORYSJ
Putative KIAA protein OS=Oryza sativa subsp. japonica
,54.64,8e-18,seg,NULL,NODE_67294_length_463_cov_61.784016.path1.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g37610.1                                                       130   4e-31
Glyma10g07660.1                                                       129   5e-31
Glyma19g37600.1                                                       127   4e-30
Glyma03g34910.1                                                       125   7e-30
Glyma20g28050.1                                                        56   1e-08
Glyma10g39710.1                                                        53   8e-08

>Glyma19g37610.1 
          Length = 975

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/105 (60%), Positives = 72/105 (68%), Gaps = 1/105 (0%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           M+HLFGTW+GVFP Q+LQ IEKELGF PAVN                     IHVNPKYL
Sbjct: 169 MQHLFGTWKGVFPPQSLQMIEKELGFAPAVNSSASVSATVRSDLQSQRPPHSIHVNPKYL 228

Query: 61  ERQRLQQSSRTKG-VDDMSGAIANSNDDPEMPDRALGVKRPRADP 104
           ERQRLQQSSR+KG V+DM+GA+ NSN+D E PDRAL   RP  DP
Sbjct: 229 ERQRLQQSSRSKGVVNDMTGAVLNSNEDSERPDRALSAARPWLDP 273


>Glyma10g07660.1 
          Length = 898

 Score =  129 bits (325), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 77/142 (54%), Gaps = 37/142 (26%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW+GVFP QTLQ IEKELGFTPAVNG                    IHVNPKYL
Sbjct: 51  MRHLFGTWKGVFPPQTLQVIEKELGFTPAVNGSSSASATLRSDSQSQRPPHSIHVNPKYL 110

Query: 61  ERQRLQQSSRTK-------------------------------------GVDDMSGAIAN 83
           ERQRLQQSSR++                                      VDD++GAI+N
Sbjct: 111 ERQRLQQSSRSQLLIPVTVLSVLLSIQCWPCKDDNLTVIPIDILSCYLGVVDDITGAISN 170

Query: 84  SNDDPEMPDRALGVKRPRADPS 105
           +NDDPEMP R LGV RP  DPS
Sbjct: 171 TNDDPEMPGRTLGVGRPWVDPS 192


>Glyma19g37600.1 
          Length = 831

 Score =  127 bits (318), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 63/105 (60%), Positives = 71/105 (67%), Gaps = 1/105 (0%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           M+HLFGTW+GVFP Q+LQ IEKELGF PAVN                     IHVNPKYL
Sbjct: 1   MKHLFGTWKGVFPPQSLQMIEKELGFAPAVNSSASVSATVRSDLQSQRPPHSIHVNPKYL 60

Query: 61  ERQRLQQSSRTKG-VDDMSGAIANSNDDPEMPDRALGVKRPRADP 104
           ERQRLQQSSR+KG V+DM+ A+ NSN+D E PDRAL   RP  DP
Sbjct: 61  ERQRLQQSSRSKGVVNDMTEAVLNSNEDLERPDRALSAARPWLDP 105


>Glyma03g34910.1 
          Length = 754

 Score =  125 bits (315), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 64/105 (60%), Positives = 71/105 (67%), Gaps = 3/105 (2%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           M+HLFGTW+GVFP Q+LQ IEKELGF PAVNG                    IHVNPKYL
Sbjct: 60  MKHLFGTWKGVFPPQSLQMIEKELGFAPAVNGSASVSATVRSDLQSQRPPHSIHVNPKYL 119

Query: 61  ERQRLQQSSRTKG-VDDMSGAIANSNDDPEMPDRALGVKRPRADP 104
           ERQRLQQSSR+KG V DM+GA+ NSN+D E PDRA    RP  DP
Sbjct: 120 ERQRLQQSSRSKGVVSDMTGAVLNSNEDSERPDRAAA--RPWLDP 162


>Glyma20g28050.1 
          Length = 837

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/74 (43%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKY- 59
           MRHLFGTW  VFP   L+ IE EL F+ AVN                     IHVNPKY 
Sbjct: 163 MRHLFGTWSKVFPPSVLRKIETELQFSQAVN-TQSSTLNPVRASESSRPSHAIHVNPKYL 221

Query: 60  --LERQRLQQSSRT 71
             LER  +  +S+T
Sbjct: 222 RQLERSTVDSASKT 235


>Glyma10g39710.1 
          Length = 837

 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 1   MRHLFGTWRGVFPSQTLQAIEKELGFTPAVNGXXXXXXXXXXXXXXXXXXXXIHVNPKYL 60
           MRHLFGTW  VFP   L  IE EL F+ AVN                     IHVNPKYL
Sbjct: 162 MRHLFGTWSKVFPPSVLHKIEAELQFSQAVN-TQSSTPNPVRASESSRPSHGIHVNPKYL 220