Miyakogusa Predicted Gene

Lj5g3v0086230.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0086230.1 Non Chatacterized Hit- tr|I1M8F2|I1M8F2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45814
PE,76.37,0,seg,NULL; PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; PEX11,Peroxisomal bioge,CUFF.52501.1
         (266 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g08300.1                                                       309   2e-84
Glyma17g36750.1                                                       299   2e-81
Glyma09g35810.1                                                        90   2e-18
Glyma12g01540.1                                                        88   1e-17
Glyma09g40060.2                                                        52   7e-07
Glyma09g40060.1                                                        52   7e-07
Glyma18g46140.3                                                        51   2e-06
Glyma18g46140.2                                                        51   2e-06
Glyma18g46140.1                                                        51   2e-06

>Glyma14g08300.1 
          Length = 259

 Score =  309 bits (792), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 159/237 (67%), Positives = 180/237 (75%), Gaps = 4/237 (1%)

Query: 32  KRDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVS 91
           +RD L+HVEAYLAKRDGVDKLLKISRY TKL+LASS  LL+S+  LS RLK+FESSVGVS
Sbjct: 25  QRDLLSHVEAYLAKRDGVDKLLKISRYATKLILASS--LLQSNPTLSHRLKSFESSVGVS 82

Query: 92  RKAFRLGKFVQDLNALGASDP--KRDLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHS 149
           RKAFRLGKFVQDLNAL  + P  KR L  S++AYGGEGFYYFVEQFVWLAKSGLIDPKH+
Sbjct: 83  RKAFRLGKFVQDLNALKTTHPHSKRQLFLSLLAYGGEGFYYFVEQFVWLAKSGLIDPKHA 142

Query: 150 RTLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVEIAGLRGVXXXXXXXXXXXX 209
           R   K+SAWAEFVGYFGS+ALKL DL+ I ++EAC++SSVEI  LRG             
Sbjct: 143 RFFQKLSAWAEFVGYFGSVALKLGDLQEIAKEEACVESSVEITRLRGSGCVDEEVRLGKL 202

Query: 210 XXXXXMKQLSVVQDLADGLMALDDILDGKAPFSKPXXXXXXXXXXXXXXTHKNWVSC 266
                MK+LSVVQDLAD +MALDDILDGK PFSKP              +HKNW+SC
Sbjct: 203 REKKMMKRLSVVQDLADAVMALDDILDGKGPFSKPVLMALAGLLSALISSHKNWISC 259


>Glyma17g36750.1 
          Length = 262

 Score =  299 bits (765), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/238 (66%), Positives = 174/238 (73%), Gaps = 5/238 (2%)

Query: 32  KRDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDT-NLSQRLKAFESSVGV 90
           +RD LNHVEAYLAKRDGVDKLLKISRYT KL+LA+S  LL+S+   LS RLK+FESSVGV
Sbjct: 27  QRDLLNHVEAYLAKRDGVDKLLKISRYTAKLILATS--LLQSNNPTLSHRLKSFESSVGV 84

Query: 91  SRKAFRLGKFVQDLNALGASDPKR--DLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKH 148
           SRKAFRLGKFVQDLNAL  + P    DL  SV+AYGGEG YYFVEQFVWLAKSGLID KH
Sbjct: 85  SRKAFRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKH 144

Query: 149 SRTLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVEIAGLRGVXXXXXXXXXXX 208
           SR   K+SAWAEFVGYFGS+ALKL DL  I ++EACL+SSVEI  LR             
Sbjct: 145 SRKFQKLSAWAEFVGYFGSVALKLGDLGAIAQEEACLKSSVEITRLREGGCVDEEAQLGK 204

Query: 209 XXXXXXMKQLSVVQDLADGLMALDDILDGKAPFSKPXXXXXXXXXXXXXXTHKNWVSC 266
                 MK+LSVVQDLAD +MALDD+LDG  PFSKP              THKNWVSC
Sbjct: 205 LRDKKTMKRLSVVQDLADAVMALDDVLDGNGPFSKPVLMASAGLLSALISTHKNWVSC 262


>Glyma09g35810.1 
          Length = 223

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 7/160 (4%)

Query: 34  DFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRK 93
           D ++ +  +LAKRDG+DK++K  +Y +KL+   + ++  +  ++S+R K +E + G+SRK
Sbjct: 3   DSVDKLVIFLAKRDGIDKVVKTFQYVSKLV---NWHVEGTQADISRRFKQWEVASGLSRK 59

Query: 94  AFRLGKFVQDLNALGASDPKRDL---VFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHSR 150
           AFR G+F+   N L   +P   L   + +V+A  GE  Y+F + F+WLA+ G ID   ++
Sbjct: 60  AFRTGRFLSGFNVL-RRNPGSTLSLRLLAVLANAGEMVYFFFDHFLWLARIGTIDASLAK 118

Query: 151 TLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVE 190
            +  ISA+ E VGY   I      L+  I+ +  L SS E
Sbjct: 119 KMSFISAFGESVGYVFFIIADFIMLKEGIKAQRELSSSKE 158


>Glyma12g01540.1 
          Length = 251

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 83/134 (61%), Gaps = 7/134 (5%)

Query: 34  DFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRK 93
           D ++ +  +LAKRDG+DKL+K  +Y +KL+   + ++  +  + S+R K +E + G+SRK
Sbjct: 26  DSVDKLVIFLAKRDGIDKLVKTFQYVSKLV---NWHVEATHPDTSKRFKQWEVASGLSRK 82

Query: 94  AFRLGKFVQDLNALGASDPKRDL---VFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHSR 150
           AFR G+F+   N L   +P   L   + +V++  GE  Y+F + F+WLA+ G ID   ++
Sbjct: 83  AFRTGRFLTGFNVL-RRNPGSTLSLRLLAVLSNAGEMVYFFFDHFLWLARIGTIDASLAK 141

Query: 151 TLGKISAWAEFVGY 164
            +  ISA+ E VGY
Sbjct: 142 KMSFISAFGESVGY 155


>Glyma09g40060.2 
          Length = 235

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)

Query: 42  YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
           YL K +  DK+ +  +Y +K L    P   ++           + +  ++RK FRL KFV
Sbjct: 17  YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66

Query: 102 QDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH-SRTLGKIS 156
            DL+AL +  P+   L  +++          + F++QFVWL ++G+   K  +  +G+IS
Sbjct: 67  NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRIS 126

Query: 157 AWA 159
            + 
Sbjct: 127 LYC 129


>Glyma09g40060.1 
          Length = 235

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)

Query: 42  YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
           YL K +  DK+ +  +Y +K L    P   ++           + +  ++RK FRL KFV
Sbjct: 17  YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66

Query: 102 QDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH-SRTLGKIS 156
            DL+AL +  P+   L  +++          + F++QFVWL ++G+   K  +  +G+IS
Sbjct: 67  NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRIS 126

Query: 157 AWA 159
            + 
Sbjct: 127 LYC 129


>Glyma18g46140.3 
          Length = 235

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)

Query: 42  YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
           YL K +  DK+ +  +Y +K L    P   ++           + +  ++RK FRL KFV
Sbjct: 17  YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66

Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
            DL+AL +  P+      +I  G         + F++QFVWL ++G+   K  +  +G+I
Sbjct: 67  NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125

Query: 156 SAWA 159
           S + 
Sbjct: 126 SLYC 129


>Glyma18g46140.2 
          Length = 235

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)

Query: 42  YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
           YL K +  DK+ +  +Y +K L    P   ++           + +  ++RK FRL KFV
Sbjct: 17  YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66

Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
            DL+AL +  P+      +I  G         + F++QFVWL ++G+   K  +  +G+I
Sbjct: 67  NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125

Query: 156 SAWA 159
           S + 
Sbjct: 126 SLYC 129


>Glyma18g46140.1 
          Length = 235

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)

Query: 42  YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
           YL K +  DK+ +  +Y +K L    P   ++           + +  ++RK FRL KFV
Sbjct: 17  YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66

Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
            DL+AL +  P+      +I  G         + F++QFVWL ++G+   K  +  +G+I
Sbjct: 67  NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125

Query: 156 SAWA 159
           S + 
Sbjct: 126 SLYC 129