Miyakogusa Predicted Gene
- Lj5g3v0086230.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0086230.1 Non Chatacterized Hit- tr|I1M8F2|I1M8F2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.45814
PE,76.37,0,seg,NULL; PEROXISOMAL BIOGENESIS FACTOR 11,Peroxisomal
biogenesis factor 11; PEX11,Peroxisomal bioge,CUFF.52501.1
(266 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g08300.1 309 2e-84
Glyma17g36750.1 299 2e-81
Glyma09g35810.1 90 2e-18
Glyma12g01540.1 88 1e-17
Glyma09g40060.2 52 7e-07
Glyma09g40060.1 52 7e-07
Glyma18g46140.3 51 2e-06
Glyma18g46140.2 51 2e-06
Glyma18g46140.1 51 2e-06
>Glyma14g08300.1
Length = 259
Score = 309 bits (792), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 159/237 (67%), Positives = 180/237 (75%), Gaps = 4/237 (1%)
Query: 32 KRDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVS 91
+RD L+HVEAYLAKRDGVDKLLKISRY TKL+LASS LL+S+ LS RLK+FESSVGVS
Sbjct: 25 QRDLLSHVEAYLAKRDGVDKLLKISRYATKLILASS--LLQSNPTLSHRLKSFESSVGVS 82
Query: 92 RKAFRLGKFVQDLNALGASDP--KRDLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHS 149
RKAFRLGKFVQDLNAL + P KR L S++AYGGEGFYYFVEQFVWLAKSGLIDPKH+
Sbjct: 83 RKAFRLGKFVQDLNALKTTHPHSKRQLFLSLLAYGGEGFYYFVEQFVWLAKSGLIDPKHA 142
Query: 150 RTLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVEIAGLRGVXXXXXXXXXXXX 209
R K+SAWAEFVGYFGS+ALKL DL+ I ++EAC++SSVEI LRG
Sbjct: 143 RFFQKLSAWAEFVGYFGSVALKLGDLQEIAKEEACVESSVEITRLRGSGCVDEEVRLGKL 202
Query: 210 XXXXXMKQLSVVQDLADGLMALDDILDGKAPFSKPXXXXXXXXXXXXXXTHKNWVSC 266
MK+LSVVQDLAD +MALDDILDGK PFSKP +HKNW+SC
Sbjct: 203 REKKMMKRLSVVQDLADAVMALDDILDGKGPFSKPVLMALAGLLSALISSHKNWISC 259
>Glyma17g36750.1
Length = 262
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 174/238 (73%), Gaps = 5/238 (2%)
Query: 32 KRDFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDT-NLSQRLKAFESSVGV 90
+RD LNHVEAYLAKRDGVDKLLKISRYT KL+LA+S LL+S+ LS RLK+FESSVGV
Sbjct: 27 QRDLLNHVEAYLAKRDGVDKLLKISRYTAKLILATS--LLQSNNPTLSHRLKSFESSVGV 84
Query: 91 SRKAFRLGKFVQDLNALGASDPKR--DLVFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKH 148
SRKAFRLGKFVQDLNAL + P DL SV+AYGGEG YYFVEQFVWLAKSGLID KH
Sbjct: 85 SRKAFRLGKFVQDLNALKTTHPHSNLDLFLSVLAYGGEGLYYFVEQFVWLAKSGLIDAKH 144
Query: 149 SRTLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVEIAGLRGVXXXXXXXXXXX 208
SR K+SAWAEFVGYFGS+ALKL DL I ++EACL+SSVEI LR
Sbjct: 145 SRKFQKLSAWAEFVGYFGSVALKLGDLGAIAQEEACLKSSVEITRLREGGCVDEEAQLGK 204
Query: 209 XXXXXXMKQLSVVQDLADGLMALDDILDGKAPFSKPXXXXXXXXXXXXXXTHKNWVSC 266
MK+LSVVQDLAD +MALDD+LDG PFSKP THKNWVSC
Sbjct: 205 LRDKKTMKRLSVVQDLADAVMALDDVLDGNGPFSKPVLMASAGLLSALISTHKNWVSC 262
>Glyma09g35810.1
Length = 223
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 7/160 (4%)
Query: 34 DFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRK 93
D ++ + +LAKRDG+DK++K +Y +KL+ + ++ + ++S+R K +E + G+SRK
Sbjct: 3 DSVDKLVIFLAKRDGIDKVVKTFQYVSKLV---NWHVEGTQADISRRFKQWEVASGLSRK 59
Query: 94 AFRLGKFVQDLNALGASDPKRDL---VFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHSR 150
AFR G+F+ N L +P L + +V+A GE Y+F + F+WLA+ G ID ++
Sbjct: 60 AFRTGRFLSGFNVL-RRNPGSTLSLRLLAVLANAGEMVYFFFDHFLWLARIGTIDASLAK 118
Query: 151 TLGKISAWAEFVGYFGSIALKLRDLRLIIEDEACLQSSVE 190
+ ISA+ E VGY I L+ I+ + L SS E
Sbjct: 119 KMSFISAFGESVGYVFFIIADFIMLKEGIKAQRELSSSKE 158
>Glyma12g01540.1
Length = 251
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 83/134 (61%), Gaps = 7/134 (5%)
Query: 34 DFLNHVEAYLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRK 93
D ++ + +LAKRDG+DKL+K +Y +KL+ + ++ + + S+R K +E + G+SRK
Sbjct: 26 DSVDKLVIFLAKRDGIDKLVKTFQYVSKLV---NWHVEATHPDTSKRFKQWEVASGLSRK 82
Query: 94 AFRLGKFVQDLNALGASDPKRDL---VFSVIAYGGEGFYYFVEQFVWLAKSGLIDPKHSR 150
AFR G+F+ N L +P L + +V++ GE Y+F + F+WLA+ G ID ++
Sbjct: 83 AFRTGRFLTGFNVL-RRNPGSTLSLRLLAVLSNAGEMVYFFFDHFLWLARIGTIDASLAK 141
Query: 151 TLGKISAWAEFVGY 164
+ ISA+ E VGY
Sbjct: 142 KMSFISAFGESVGY 155
>Glyma09g40060.2
Length = 235
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 42 YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
YL K + DK+ + +Y +K L P ++ + + ++RK FRL KFV
Sbjct: 17 YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66
Query: 102 QDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH-SRTLGKIS 156
DL+AL + P+ L +++ + F++QFVWL ++G+ K + +G+IS
Sbjct: 67 NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRIS 126
Query: 157 AWA 159
+
Sbjct: 127 LYC 129
>Glyma09g40060.1
Length = 235
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 42 YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
YL K + DK+ + +Y +K L P ++ + + ++RK FRL KFV
Sbjct: 17 YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66
Query: 102 QDLNALGASDPK-RDLVFSVIAYGGEGF---YYFVEQFVWLAKSGLIDPKH-SRTLGKIS 156
DL+AL + P+ L +++ + F++QFVWL ++G+ K + +G+IS
Sbjct: 67 NDLHALISPTPQGTPLPLALLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRIS 126
Query: 157 AWA 159
+
Sbjct: 127 LYC 129
>Glyma18g46140.3
Length = 235
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 42 YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
YL K + DK+ + +Y +K L P ++ + + ++RK FRL KFV
Sbjct: 17 YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66
Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
DL+AL + P+ +I G + F++QFVWL ++G+ K + +G+I
Sbjct: 67 NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125
Query: 156 SAWA 159
S +
Sbjct: 126 SLYC 129
>Glyma18g46140.2
Length = 235
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 42 YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
YL K + DK+ + +Y +K L P ++ + + ++RK FRL KFV
Sbjct: 17 YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66
Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
DL+AL + P+ +I G + F++QFVWL ++G+ K + +G+I
Sbjct: 67 NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125
Query: 156 SAWA 159
S +
Sbjct: 126 SLYC 129
>Glyma18g46140.1
Length = 235
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 17/124 (13%)
Query: 42 YLAKRDGVDKLLKISRYTTKLLLASSPNLLRSDTNLSQRLKAFESSVGVSRKAFRLGKFV 101
YL K + DK+ + +Y +K L P ++ + + ++RK FRL KFV
Sbjct: 17 YLGKAEARDKICRAIQYGSKFLSNGEPGTAQN----------VDKTTSLARKVFRLFKFV 66
Query: 102 QDLNALGASDPKRDLVFSVIAYGGE-----GFYYFVEQFVWLAKSGLIDPKH-SRTLGKI 155
DL+AL + P+ +I G + F++QFVWL ++G+ K + +G+I
Sbjct: 67 NDLHALISPTPQ-GTPLPLILLGKSKNALLSTFLFLDQFVWLGRTGIYQNKERTELIGRI 125
Query: 156 SAWA 159
S +
Sbjct: 126 SLYC 129