Miyakogusa Predicted Gene

Lj5g3v0080880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0080880.1 Non Chatacterized Hit- tr|Q8LCG5|Q8LCG5_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,54.87,2e-19,seg,NULL,CUFF.52474.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g27390.3                                                       189   1e-48
Glyma20g27390.2                                                       189   1e-48
Glyma20g27390.1                                                       189   1e-48
Glyma10g40030.1                                                       184   3e-47
Glyma10g40030.2                                                       134   5e-32

>Glyma20g27390.3 
          Length = 205

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 1   MAERSKELLQFEHKDLPFSSTESALLVCDNKRES----KRIPSNGSLKTAPVPPSQLLGK 56
           MAE+SKELLQFEHK  P SS ES LLVCDNK+ES    +R+P +G+  TAP PPSQLLGK
Sbjct: 1   MAEKSKELLQFEHKGTPLSSLESTLLVCDNKKESDTQTRRLPPHGTPLTAPHPPSQLLGK 60

Query: 57  VRDFLGVMSEANKRLELDAKDHPENYNIEELTGNESQVIEMDLMLGVADLHTPXXXXXXX 116
           V+DFLGVMSEANKRLELDAKD+PENY+IEELTGNES+VIEMDLMLGVADLHTP       
Sbjct: 61  VKDFLGVMSEANKRLELDAKDNPENYDIEELTGNESEVIEMDLMLGVADLHTPEAVAAAE 120

Query: 117 XXXXXHEPVIPLA 129
                 +PVIPLA
Sbjct: 121 SAISTCQPVIPLA 133


>Glyma20g27390.2 
          Length = 205

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 1   MAERSKELLQFEHKDLPFSSTESALLVCDNKRES----KRIPSNGSLKTAPVPPSQLLGK 56
           MAE+SKELLQFEHK  P SS ES LLVCDNK+ES    +R+P +G+  TAP PPSQLLGK
Sbjct: 1   MAEKSKELLQFEHKGTPLSSLESTLLVCDNKKESDTQTRRLPPHGTPLTAPHPPSQLLGK 60

Query: 57  VRDFLGVMSEANKRLELDAKDHPENYNIEELTGNESQVIEMDLMLGVADLHTPXXXXXXX 116
           V+DFLGVMSEANKRLELDAKD+PENY+IEELTGNES+VIEMDLMLGVADLHTP       
Sbjct: 61  VKDFLGVMSEANKRLELDAKDNPENYDIEELTGNESEVIEMDLMLGVADLHTPEAVAAAE 120

Query: 117 XXXXXHEPVIPLA 129
                 +PVIPLA
Sbjct: 121 SAISTCQPVIPLA 133


>Glyma20g27390.1 
          Length = 205

 Score =  189 bits (479), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 96/133 (72%), Positives = 107/133 (80%), Gaps = 4/133 (3%)

Query: 1   MAERSKELLQFEHKDLPFSSTESALLVCDNKRES----KRIPSNGSLKTAPVPPSQLLGK 56
           MAE+SKELLQFEHK  P SS ES LLVCDNK+ES    +R+P +G+  TAP PPSQLLGK
Sbjct: 1   MAEKSKELLQFEHKGTPLSSLESTLLVCDNKKESDTQTRRLPPHGTPLTAPHPPSQLLGK 60

Query: 57  VRDFLGVMSEANKRLELDAKDHPENYNIEELTGNESQVIEMDLMLGVADLHTPXXXXXXX 116
           V+DFLGVMSEANKRLELDAKD+PENY+IEELTGNES+VIEMDLMLGVADLHTP       
Sbjct: 61  VKDFLGVMSEANKRLELDAKDNPENYDIEELTGNESEVIEMDLMLGVADLHTPEAVAAAE 120

Query: 117 XXXXXHEPVIPLA 129
                 +PVIPLA
Sbjct: 121 SAISTCQPVIPLA 133


>Glyma10g40030.1 
          Length = 204

 Score =  184 bits (467), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 105/133 (78%), Gaps = 4/133 (3%)

Query: 1   MAERSKELLQFEHKDLPFSSTESALLVCDNKRES----KRIPSNGSLKTAPVPPSQLLGK 56
           MAERSKELL+FEH   P SS ES LLVCDNK+ES    +R+P +G L TAP+PPSQLLGK
Sbjct: 1   MAERSKELLKFEHNGTPLSSLESTLLVCDNKKESDSQTRRLPPDGMLLTAPLPPSQLLGK 60

Query: 57  VRDFLGVMSEANKRLELDAKDHPENYNIEELTGNESQVIEMDLMLGVADLHTPXXXXXXX 116
           V+DFLGVMSEANKRLELDAKD+PENY+IEELTGNES+VIEMDLMLGVADLHT        
Sbjct: 61  VKDFLGVMSEANKRLELDAKDNPENYDIEELTGNESEVIEMDLMLGVADLHTQEAVAAAE 120

Query: 117 XXXXXHEPVIPLA 129
                 + VIPLA
Sbjct: 121 SAISTCQSVIPLA 133


>Glyma10g40030.2 
          Length = 183

 Score =  134 bits (336), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 76/133 (57%), Positives = 84/133 (63%), Gaps = 25/133 (18%)

Query: 1   MAERSKELLQFEHKDLPFSSTESALLVCDNKRES----KRIPSNGSLKTAPVPPSQLLGK 56
           MAERSKELL+FEH   P SS ES LLVCDNK+ES    +R+P +G L TAP+PPSQLLGK
Sbjct: 1   MAERSKELLKFEHNGTPLSSLESTLLVCDNKKESDSQTRRLPPDGMLLTAPLPPSQLLGK 60

Query: 57  VRDFLGVMSEANKRLELDAKDHPENYNIEELTGNESQVIEMDLMLGVADLHTPXXXXXXX 116
           V+DFLGVMSEANKRLELDAK                     DLMLGVADLHT        
Sbjct: 61  VKDFLGVMSEANKRLELDAK---------------------DLMLGVADLHTQEAVAAAE 99

Query: 117 XXXXXHEPVIPLA 129
                 + VIPLA
Sbjct: 100 SAISTCQSVIPLA 112