Miyakogusa Predicted Gene

Lj5g3v0014200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0014200.1 Non Chatacterized Hit- tr|B9G6H3|B9G6H3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,44.44,6e-19,
,CUFF.52531.1
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g33920.1                                                       207   3e-54

>Glyma13g33920.1 
          Length = 304

 Score =  207 bits (527), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 102/133 (76%), Positives = 112/133 (84%), Gaps = 1/133 (0%)

Query: 1   MLTAVQASRFDHWMGPTIRMSLPSFSGGTECNPNLLKYSCKIECRVQAVQPLKVSRSIPI 60
           + + V A    HWMGPT RMSLPSFSG TE NPNLLKYSC+IECRVQA++PLKVS + P 
Sbjct: 173 LTSPVSALGIGHWMGPTTRMSLPSFSGATEYNPNLLKYSCQIECRVQALKPLKVSGAFPS 232

Query: 61  TNDDDNEKSLEDYGSSSHEAKDHENDRQNFSTCVMLSKPILALKFNQMKMQVEAPVVLSQ 120
           TNDD  E SLEDYGSSSH AKDH+ND QNFSTCVMLSKPILALKFNQM MQVEAP+VLSQ
Sbjct: 233 TNDD-TELSLEDYGSSSHVAKDHKNDAQNFSTCVMLSKPILALKFNQMMMQVEAPLVLSQ 291

Query: 121 SLNSLETSVTSVP 133
             NSLET+V+SVP
Sbjct: 292 CSNSLETTVSSVP 304