Miyakogusa Predicted Gene

Lj4g3v3116180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3116180.1 CUFF.52709.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38610.1                                                       316   1e-86
Glyma18g47710.1                                                       315   2e-86

>Glyma09g38610.1 
          Length = 214

 Score =  316 bits (810), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 162/215 (75%), Positives = 168/215 (78%), Gaps = 1/215 (0%)

Query: 1   MAAASPMASQLKSTFTRPSLVTPKXXXXXXXXXXXXXRRQFTFTVKAIQSEKPTYQVIQP 60
           MAAASPMASQLKSTFTR +LV PK             RRQF+FTVKAIQSEKPTYQVIQP
Sbjct: 1   MAAASPMASQLKSTFTR-TLVAPKGLSASSPLHLVPSRRQFSFTVKAIQSEKPTYQVIQP 59

Query: 61  INGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 120
           INGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPFVKAGP
Sbjct: 60  INGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGP 119

Query: 121 LRNTEYXXXXXXXXXXXXXXXXXXCLTIYGISSFNEGDPSTAPSLTLTGRKKVPDQLQTA 180
           LRNTE                   CLTIYGISSFNEG PSTAPSLTLTGRKK PDQLQTA
Sbjct: 120 LRNTEIAGQAGSLAAGGLVVILSLCLTIYGISSFNEGAPSTAPSLTLTGRKKEPDQLQTA 179

Query: 181 DGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYYFK 215
           DGWAK         ISGV WAYFLLYVLDLPYY K
Sbjct: 180 DGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYIK 214


>Glyma18g47710.1 
          Length = 214

 Score =  315 bits (808), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 160/215 (74%), Positives = 169/215 (78%), Gaps = 1/215 (0%)

Query: 1   MAAASPMASQLKSTFTRPSLVTPKXXXXXXXXXXXXXRRQFTFTVKAIQSEKPTYQVIQP 60
           MAAASPMASQLKSTFT+ +LV PK             +RQF+FTV+AIQSEKPTYQVIQP
Sbjct: 1   MAAASPMASQLKSTFTK-TLVAPKGLSASSPLHLLPSKRQFSFTVRAIQSEKPTYQVIQP 59

Query: 61  INGDPFIGSLETPVTSSPLVAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGP 120
           INGDPFIGSLETPVTSSPL+AWYLSNLPAYRTAV+PLLRG+EVGLAHG+LLVGPFVKAGP
Sbjct: 60  INGDPFIGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGP 119

Query: 121 LRNTEYXXXXXXXXXXXXXXXXXXCLTIYGISSFNEGDPSTAPSLTLTGRKKVPDQLQTA 180
           LRNTE                   CLTIYGISSFNEGDPSTAPSLTLTGRKK PDQLQTA
Sbjct: 120 LRNTEIAGQAGSLAAGGLVVILSLCLTIYGISSFNEGDPSTAPSLTLTGRKKEPDQLQTA 179

Query: 181 DGWAKXXXXXXXXXISGVTWAYFLLYVLDLPYYFK 215
           DGWAK         ISGV WAYFLLYVLDLPYY K
Sbjct: 180 DGWAKFTGGFFFGGISGVIWAYFLLYVLDLPYYIK 214