Miyakogusa Predicted Gene

Lj4g3v3114870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3114870.1 Non Chatacterized Hit- tr|I1KQK8|I1KQK8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,35.53,6e-19,seg,NULL,NODE_85345_length_786_cov_7.073792.path2.1
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g05880.1                                                        98   9e-21
Glyma01g33230.1                                                        65   8e-11
Glyma01g09210.1                                                        65   9e-11
Glyma14g11390.1                                                        50   2e-06

>Glyma08g05880.1 
          Length = 287

 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 60/117 (51%), Positives = 75/117 (64%), Gaps = 12/117 (10%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDI-TVGSVLLLQKVAVFSPSRSTCYLNITLPN 59
           +TV LKDPT T+ A++HRKVF+     K+I TVGSVL+LQKVAVFSP+R+T YLNITL N
Sbjct: 127 ITVNLKDPTATLTATVHRKVFSHPDLRKEILTVGSVLILQKVAVFSPNRNTRYLNITLHN 186

Query: 60  ILKVFSKDSGPPSGQVYPASSDNHTASGLGRHEK---SGSTFSLPQERTGGTMTKSS 113
           I+K  S  +   +  V+             RHE+    GSTFSLP ERT G M+  S
Sbjct: 187 IVKYKSIKNY--TSYVF------QVTCCKKRHERLLTPGSTFSLPLERTEGIMSNLS 235


>Glyma01g33230.1 
          Length = 130

 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFS--PSRSTCYLNITLP 58
           M VTLKDPT T+ A + R +  +  F + ITVGSVL+LQ++ VF   P    CYLNITL 
Sbjct: 69  MRVTLKDPTWTIDAILWRTIIQDKDFDQYITVGSVLVLQEIIVFCLFPPHFKCYLNITLH 128

Query: 59  NI 60
           N+
Sbjct: 129 NV 130


>Glyma01g09210.1 
          Length = 208

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFSPS--RSTCYLNITLP 58
           M VTLKDP  T+ A++ + +  +  FG+ I +G VL+LQ+  +F P    S CYLNITL 
Sbjct: 118 MRVTLKDPIWTIDATLQQTIIEDKDFGQYIAIGFVLILQEAVLFCPFPPHSKCYLNITLH 177

Query: 59  NILKV 63
           NI+KV
Sbjct: 178 NIVKV 182


>Glyma14g11390.1 
          Length = 223

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 1   MTVTLKDPTGTVGASIHRKVFTESQFGKDITVGSVLLLQKVAVFSPS--RSTCYLNITLP 58
           M VTLKD T  +   + + +     FG+ I VG VL+L++  VF P    S CYLN+TL 
Sbjct: 116 MRVTLKDTTYIIDVILRQTIIQGKDFGQYIVVGFVLVLRESIVFCPFPPHSKCYLNVTLH 175

Query: 59  NIL 61
           N++
Sbjct: 176 NVV 178