Miyakogusa Predicted Gene

Lj4g3v3113050.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3113050.1 Non Chatacterized Hit- tr|I3JYH2|I3JYH2_ORENI
Uncharacterized protein OS=Oreochromis niloticus
GN=SE,25.4,3e-18,Rubis-subs-bind,Rubisco LS methyltransferase,
substrate-binding domain; SET,SET domain; SET domain,N,CUFF.52319.1
         (472 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g05020.1                                                       743   0.0  
Glyma05g34650.1                                                       679   0.0  
Glyma07g35510.1                                                        57   5e-08
Glyma09g05510.1                                                        51   2e-06

>Glyma08g05020.1 
          Length = 472

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/474 (77%), Positives = 401/474 (84%), Gaps = 4/474 (0%)

Query: 1   MATSKMVMSSLTHLRPLTCAA-SASRIVSHPPDLINWVTREGGFVHRAVKIAQL-GSNGL 58
           MAT K VM SL+ LRPLTCA+ SASR+V  PPDLI WVTREGGFVHRAVKI QL  SNGL
Sbjct: 1   MATGKTVMCSLSQLRPLTCASTSASRLVPQPPDLIKWVTREGGFVHRAVKITQLDSSNGL 60

Query: 59  GLVAKQEIPMGSELIVLPHHIPLQFPSLDVNPHDSALLQLVHHVPEEXXXXXXXXXXXQE 118
           GLVAK+EIP GS+LIVLPHH+PL+F SL  +P  S L  L   VPEE           QE
Sbjct: 61  GLVAKEEIPRGSDLIVLPHHLPLRFTSLQQDP--SLLHHLARQVPEELWAMKLGLKLLQE 118

Query: 119 RAKVGSYWWPYISNLPITYSVPIFFPGEDIKNLQYGPLLHQVNKRCRFLLEFEQEVKRAL 178
           RAKVGS+WWPYISNLP TY+VPIFF GEDIKNL Y P+LHQVNKRCRFLL+FE+EVKR L
Sbjct: 119 RAKVGSFWWPYISNLPETYTVPIFFSGEDIKNLHYAPILHQVNKRCRFLLDFEREVKRTL 178

Query: 179 ASLTPDKHPFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHS 238
            SLT DKHPFGG EVDA SLGWAMSAVSSRAFRL+G KDPNG  +DIPMMLPLIDMCNHS
Sbjct: 179 VSLTQDKHPFGGQEVDASSLGWAMSAVSSRAFRLYGEKDPNGIRIDIPMMLPLIDMCNHS 238

Query: 239 FNPNAKIIQEQDSSSTKMQVKVVAKTTIKEDDPLLLCYGNLSNDLFLLDYGFVMHSNPYD 298
           FNPNA+I+QEQD+S+++MQVKVVA+T IKEDDPLLLCYG L+NDLFLLDYGFVMHSNPYD
Sbjct: 239 FNPNARIVQEQDTSNSRMQVKVVAETAIKEDDPLLLCYGCLNNDLFLLDYGFVMHSNPYD 298

Query: 299 YIELKYDGAFLDAASTAAGVSSPNFSTPAPWQEHILSQLNLAGEAPDLKVSLGGQEIIEG 358
            IELKYDGA LDAASTAAGVSSPNFS P PWQE ILSQLNLAGE  DLKVSLGGQE +E 
Sbjct: 299 CIELKYDGALLDAASTAAGVSSPNFSAPVPWQELILSQLNLAGETADLKVSLGGQETVEA 358

Query: 359 XXXXXXXXXXXSDAETVQKHDLNTLKSLHAEAPLGVANDIAVFRTLIALCVIALGHFPTQ 418
                      S+ ETVQK+DL+TL+SL AEAPLGVAN+IAVFRTLIALCVIALGHFPT+
Sbjct: 359 RLLAALRVLLSSNVETVQKYDLSTLQSLDAEAPLGVANEIAVFRTLIALCVIALGHFPTK 418

Query: 419 IADDESLLKQGAPGSTELAIQFRMQKKSVIIDVVRDLSRRVKLLSSKETVTAEG 472
           I DDESLLKQGA GSTELAIQ+R+QKKSVIIDV+R++SRR+KLLSSKET TAEG
Sbjct: 419 IMDDESLLKQGASGSTELAIQYRIQKKSVIIDVMRNISRRLKLLSSKETATAEG 472


>Glyma05g34650.1 
          Length = 423

 Score =  679 bits (1753), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/466 (72%), Positives = 372/466 (79%), Gaps = 44/466 (9%)

Query: 8   MSSLTHLRPLTCAASASRIVSHPPDLINWVTREGGFVHRAVKIAQL-GSNGLGLVAKQEI 66
           M SLT LRPLTCAASA       PDLI WV REGGFVHRAVKIAQL  SNGLGLV K+EI
Sbjct: 1   MCSLTQLRPLTCAASA-------PDLIKWVAREGGFVHRAVKIAQLDSSNGLGLVTKEEI 53

Query: 67  PMGSELIVLPHHIPLQFPSLDVNPHDSALLQLVHHVPEEXXXXXXXXXXXQERAKVGSYW 126
           P G EL  +   + L                                   QERAKVGS+W
Sbjct: 54  PRGKELWAMKLGLKL----------------------------------LQERAKVGSFW 79

Query: 127 WPYISNLPITYSVPIFFPGEDIKNLQYGPLLHQVNKRCRFLLEFEQEVKRALASLTPDKH 186
           WPYI+NLP TY+VPIFFPGEDIKNL Y  LLHQVNKRCRFLL+FE+EVKRAL SLTPDKH
Sbjct: 80  WPYITNLPETYTVPIFFPGEDIKNLHYASLLHQVNKRCRFLLDFEREVKRALVSLTPDKH 139

Query: 187 PFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNPNAKII 246
           PFGG EVDA SLGWAMSAVSSRAFRL+G KDPNG  +D+PMMLPLIDMCNHSFNPNA+I+
Sbjct: 140 PFGGQEVDASSLGWAMSAVSSRAFRLYGEKDPNGIRIDVPMMLPLIDMCNHSFNPNARIV 199

Query: 247 QEQDSSSTKMQVKVVAKTTIKEDDPLLLCYGNLSNDLFLLDYGFVMHSNPYDYIELKYDG 306
           QEQD+S +KM  KVVA+T IKEDDPLLLCYG L+NDLFLLDYGFVMHSNPYD IELKYDG
Sbjct: 200 QEQDTSDSKM--KVVAETAIKEDDPLLLCYGCLNNDLFLLDYGFVMHSNPYDCIELKYDG 257

Query: 307 AFLDAASTAAGVSSPNFSTPAPWQEHILSQLNLAGEAPDLKVSLGGQEIIEGXXXXXXXX 366
           A LDAASTAAGVSSPNFSTPAPWQE ILSQLNLAGE PDLKVSLGGQE +EG        
Sbjct: 258 ALLDAASTAAGVSSPNFSTPAPWQELILSQLNLAGETPDLKVSLGGQETVEGRLLAALRV 317

Query: 367 XXXSDAETVQKHDLNTLKSLHAEAPLGVANDIAVFRTLIALCVIALGHFPTQIADDESLL 426
              ++ ET+QK+DL+ L+SL AEAPLGVAN+IAVFRTLIALCVIALGHFPT+I DDESLL
Sbjct: 318 ILSTNVETMQKYDLSILQSLDAEAPLGVANEIAVFRTLIALCVIALGHFPTKIMDDESLL 377

Query: 427 KQGAPGSTELAIQFRMQKKSVIIDVVRDLSRRVKLLSSKETVTAEG 472
           KQGA GSTELAIQ+R+QKKSVIIDV+++LSRR+KL+SSKET TAEG
Sbjct: 378 KQGASGSTELAIQYRIQKKSVIIDVMKNLSRRLKLVSSKETTTAEG 423


>Glyma07g35510.1 
          Length = 487

 Score = 57.0 bits (136), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 105/462 (22%), Positives = 173/462 (37%), Gaps = 68/462 (14%)

Query: 10  SLTHL-RPLT--CAASASRIVSHPP---DLINWVTREGGFVHRAVKIAQLGSNGLGLVAK 63
           S  HL RPL+  C AS    VS  P       W+  EG    +      +   GLGLVA 
Sbjct: 26  SFLHLKRPLSANCVASLGTEVSVSPAVDTFWQWLKEEGVVSGKTPVKPGVVPEGLGLVAL 85

Query: 64  QEIPMGSELIVLPHHIPLQFPSLDVNPHDSALLQLVHHVPEEXXXXXXXXXXXQERAKVG 123
           ++I     ++ +P         L +NP   A  ++                  +ER++  
Sbjct: 86  KDISRNEVVLQVPKR-------LWINPDAVAASEIGKVCSGLKPWLAVALFLIRERSRSD 138

Query: 124 SYWWPYISNLPITYSVPIFFPGEDIKNLQYGPLLHQVNKRCRFLLEFEQEVKRALAS--L 181
           S W  Y S LP      I++  E++  LQ   LL+      R + ++ Q   R L    +
Sbjct: 139 SLWKHYFSILPKETDSTIYWSEEELSELQGTQLLNTT----RSVKQYVQNEFRRLEEEII 194

Query: 182 TPDKHPFGGLEVDAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDIPMMLPLIDMCNHSFNP 241
            P+K  F    +      WA   + SRAF    N++         +++PL D+ NHS   
Sbjct: 195 IPNKKLFPS-SITLDDFFWAFGILRSRAFSRLRNEN--------LVVIPLADLINHS--- 242

Query: 242 NAKIIQEQDSSSTKMQVKVVAKT---------TIKEDDPLLLCYG-NLSNDLFLLDYGFV 291
            A++  +  +   K    + +           ++K  D + + Y  N SN    LDYGF+
Sbjct: 243 -ARVTTDDHAYEIKGAAGLFSWDYLFSLRSPLSLKAGDQVYIQYDLNKSNAELALDYGFI 301

Query: 292 MHSNPYDYIEL-----KYDGAFLDAASTAAGVSSPNFSTPAPWQEHILSQLNLAGEAPDL 346
             +   +   L     + D  F D    A    S  F   A +       L         
Sbjct: 302 EPNTDRNAYTLTLQISESDPFFGDKLDIA---ESNGFGETAYFDIFYNRPLPPGLLPYLR 358

Query: 347 KVSLGGQEIIEGXXXXXXXXXXXSDAETVQKHDLNTLKSLHAEAPLGVANDIAVFRTLIA 406
            V+LGG                 +DA  ++    N++   H E P+   N+  + R +  
Sbjct: 359 LVALGG-----------------TDAFLLESIFRNSIWG-HLELPVSRDNEELICRVVRE 400

Query: 407 LCVIALGHFPTQIADDESLLKQGAPGSTELAIQFRMQKKSVI 448
            C  AL  + T I +D+ L +        +A+  R  +K+++
Sbjct: 401 TCKTALAGYHTTIEEDQKLKEAKLDSRHAIAVGIREGEKNLL 442


>Glyma09g05510.1 
          Length = 482

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 12/142 (8%)

Query: 171 EQEVKRALASLTPDKHPFGGLEV-----DAPSLGWAMSAVSSRAFRLHGNKDPNGTHVDI 225
            ++ +RAL     + H    L++     D     WA+    SR   +         + + 
Sbjct: 216 RKQQQRALEFWESNWHSAAPLKIKRLAHDPQRFAWAVGIAQSRCINMQTRI--GALNQEA 273

Query: 226 PMMLPLIDMCNHSFNPNAKIIQEQDSSSTKMQVKVVAKTTIKEDDPLLLCY-GNLSNDLF 284
            M++P  DM NHSF PN             ++V + A   I++ D + + Y     ND+F
Sbjct: 274 NMLIPYADMLNHSFEPNCFF--HWRFKDRMLEVLINAGQRIRKGDEMTVNYMSTQKNDMF 331

Query: 285 LLDYGFVMHSNPYDYIELKYDG 306
           +  YGF    NP+D  E+K+ G
Sbjct: 332 MQRYGFSSPVNPWD--EIKFSG 351