Miyakogusa Predicted Gene

Lj4g3v3112880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3112880.1 tr|B9HJE6|B9HJE6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_766170 PE=4
SV=1,45.95,1e-18,F-box,F-box domain, cyclin-like; no description,NULL;
FBOX,F-box domain, cyclin-like; seg,NULL; PUTA,CUFF.52303.1
         (322 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g34920.1                                                       449   e-126
Glyma08g04790.1                                                       260   2e-69
Glyma05g27700.1                                                       167   2e-41
Glyma19g22680.1                                                       162   6e-40
Glyma08g10680.1                                                       161   9e-40
Glyma05g06540.1                                                       159   3e-39

>Glyma05g34920.1 
          Length = 316

 Score =  449 bits (1154), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/323 (68%), Positives = 250/323 (77%), Gaps = 8/323 (2%)

Query: 1   MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60
           MEESSKA       VE  Q  +E + PHEALFLVL+YLPVY+V+ MSQVC +LRDAVNND
Sbjct: 1   MEESSKA-------VEVEQEASEAKAPHEALFLVLSYLPVYEVVVMSQVCTSLRDAVNND 53

Query: 61  VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLIN 120
           +LPWLNVIV+RPLS RL+DEIL+KITSKANGRLKTLAL+NC H+TD GLQRVV+QNPLIN
Sbjct: 54  ILPWLNVIVQRPLSWRLNDEILIKITSKANGRLKTLALINCMHVTDHGLQRVVQQNPLIN 113

Query: 121 KLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEE 180
           KLHIPACTGIT EGV  AV+TLCQRSNCL TL INGIYN+QKEHLDML MNL KN PLEE
Sbjct: 114 KLHIPACTGITPEGVLGAVKTLCQRSNCLKTLSINGIYNIQKEHLDMLIMNLGKNQPLEE 173

Query: 181 QQ-MQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQC 239
           QQ  Q+P YYH+R SF+VF +EE+ R+IDLE CP+CFEV MVYDCPK  C +RE P   C
Sbjct: 174 QQKQQQPVYYHERCSFSVFKQEESWRLIDLEICPRCFEVRMVYDCPKEHCTRREWPLAPC 233

Query: 240 RGCKFCIPRXXXXXXXXXXXXXXXXXXXXXXXXXXWLQLPKCNFCNKPYCKQHENWWCSS 299
           RGC FCIPR                          WLQLPKC+FCNKPYCKQH NWWC+S
Sbjct: 234 RGCNFCIPRCENCGGCIESGEVEEGACEDIFCLECWLQLPKCSFCNKPYCKQHTNWWCTS 293

Query: 300 LDPIFLCRVCDEHSHGYTYTDVL 322
            D   +C+VCDE+SHGYTYTDVL
Sbjct: 294 SDSSLICKVCDENSHGYTYTDVL 316


>Glyma08g04790.1 
          Length = 273

 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 187/322 (58%), Gaps = 49/322 (15%)

Query: 1   MEESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNND 60
           MEESSK     S  VE  Q  +E + PHEA+FLVL YLPVY+V+ MSQVC +LRDAVNND
Sbjct: 1   MEESSK-----SKAVEVEQEASEAKAPHEAMFLVLAYLPVYEVVVMSQVCTSLRDAVNND 55

Query: 61  VLPWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLIN 120
           +LPWLNV V+RPLS RL+D+IL+KITSKANG LKTLAL+NC H+TD+GLQRVV+QNPLIN
Sbjct: 56  ILPWLNVFVQRPLSWRLNDDILIKITSKANGSLKTLALINCMHVTDEGLQRVVQQNPLIN 115

Query: 121 KLHIPACTGITAEGVTRAVQTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEE 180
           K     C  I A               CL  L +   Y     H  + +   R+N   ++
Sbjct: 116 K---QVCVAILA---------------CLFKLVV--AYTSMHWHNPLRSSKSRENTMPKK 155

Query: 181 QQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCR 240
           Q ++            + S +    II+ + CP+CFEV MVYDCPK  C +RE P   CR
Sbjct: 156 QLLKD-----------LKSSKSLSTIIN-DICPRCFEVRMVYDCPKGHCTRREWPLAPCR 203

Query: 241 GCKFCIPRXXXXXXXXXXXXXXXXXXXXXXXXXXWLQLPKCNFCNKPYCKQHENWWCSSL 300
           GC FCIP+                          WLQ+PKC+FCNKPY            
Sbjct: 204 GCNFCIPKCENCGGCIESGEVEEGDCEDIFCLECWLQIPKCSFCNKPYYSS--------- 254

Query: 301 DPIFLCRVCDEHSHGYTYTDVL 322
               +C+VCDE+SHGYTYTDVL
Sbjct: 255 ---LICKVCDENSHGYTYTDVL 273


>Glyma05g27700.1 
          Length = 463

 Score =  167 bits (423), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 135/234 (57%), Gaps = 5/234 (2%)

Query: 16  EKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSS 75
           + G +  E+  PH AL   L YL +  +L + +VCK+L   V  D L W ++ V+ PL+ 
Sbjct: 181 DGGGSGGEELAPHPALSFSLGYLGLSDLLVVERVCKSLHSTVCGDPLLWRSIHVDPPLNE 240

Query: 76  RLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGV 135
           R++D++L ++T++A G L+ L+L+ CT ITD GL+RV++ NP + KL +P CT ++ EG+
Sbjct: 241 RITDDVLFQLTNRAQGHLQCLSLVECTRITDDGLKRVLQSNPKLTKLSVPGCTRLSIEGI 300

Query: 136 TRAVQTL-CQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGS 194
              ++      +  L  L I G+Y + ++H + L+  L  + PL  Q   KP+YY +   
Sbjct: 301 VGILKAYNSMGTQGLKHLHIGGLYGVTQKHFEELSFLLGADGPL-LQHSHKPHYYCRG-- 357

Query: 195 FTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCRGCKFCIPR 248
             ++   ++ R+ID+E CP C  + +VYDCP   C   E     CR C  CIPR
Sbjct: 358 -NLYLSCDDDRVIDIEVCPLCQNLRLVYDCPAESCQGVEHTTQICRACTLCIPR 410


>Glyma19g22680.1 
          Length = 415

 Score =  162 bits (409), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 139/250 (55%), Gaps = 16/250 (6%)

Query: 3   ESSKAFSSLSITVEKGQAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVL 62
           E S+ ++ +    E G        PH+ALF VL YL V  +L++  VCK+L DAV  D L
Sbjct: 119 EESRNYTKIECDAEGG-------FPHDALFFVLGYLGVRDLLSVEGVCKSLCDAVRGDPL 171

Query: 63  PWLNVIVERPLSSRLSDEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKL 122
            W  + +++PL+ R++D+ LVK+T++A G L+ LAL+NC  ITD GL RV++ NP + KL
Sbjct: 172 LWRTMHIDQPLNERITDDSLVKLTNRAQGTLQHLALVNCLWITDSGLGRVLQSNPRLMKL 231

Query: 123 HIPACTGITAEGVTRAVQTLCQRSNC-LSTLRINGIYN---LQKEHLDMLAMNLRKNVPL 178
            +P C  +T EG+   ++ L       +  LRI G+     +  +  + L   L  +  L
Sbjct: 232 SVPDCIRLTIEGILFNLRALKSSGKLGIKHLRIGGLAGVCHVTDQQFEELKELLDASKYL 291

Query: 179 EEQQMQKPNYYHKRGSFTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQ 238
            +QQ QKP +Y +    T     E+ R ID+E CP+C ++  VYDCP   C  + +    
Sbjct: 292 -QQQDQKPQFYGEYSHITC----EDDRAIDIEVCPRCEKLRPVYDCPAESCQPKHQASQL 346

Query: 239 CRGCKFCIPR 248
           CRGC  CI R
Sbjct: 347 CRGCTICIAR 356


>Glyma08g10680.1 
          Length = 451

 Score =  161 bits (407), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 135/227 (59%), Gaps = 13/227 (5%)

Query: 27  PHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSDEILVKIT 86
           PH AL   L YL +  +L + +VCK+L   V  D L W ++ V++PL+ R++D++L+++T
Sbjct: 180 PHPALSFSLGYLGLSDLLVVERVCKSLHSTVRGDPLLWRSIHVDQPLNERITDDVLLQLT 239

Query: 87  SKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTRAVQTLCQRS 146
           ++A G L+ L+L+ CT ITD GL+R++E NP + KL +P CT ++ EG+     T+ +  
Sbjct: 240 NRAQGHLQCLSLVECTRITDDGLKRILEGNPKLTKLSVPGCTRLSIEGIV----TILKAY 295

Query: 147 NCLST-----LRINGIYNLQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGSFTVFSRE 201
           N + T     L I G+Y + ++H + L   L  + PL     +  ++Y++RG+  ++   
Sbjct: 296 NSMDTQGVKHLHIGGLYGVTQKHFEELRFLLGADSPLLPHSHK--SHYYRRGN--LYLSC 351

Query: 202 ENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCRGCKFCIPR 248
           ++ + ID+E CP+C  + +VYDCP   C   E     CR C  CIPR
Sbjct: 352 DDDQAIDIEVCPRCQNLRLVYDCPAESCQGVEHTTQVCRACTLCIPR 398


>Glyma05g06540.1 
          Length = 439

 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 9/234 (3%)

Query: 19  QAQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLS 78
           +   E   PH+ALF VL YL V  +L++  VC++L DAV  D L W  + +++PL+ R++
Sbjct: 152 ECDAEGGVPHDALFFVLGYLGVRDLLSVEGVCRSLCDAVRGDPLLWRTMHIDQPLNERIT 211

Query: 79  DEILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTRA 138
           D+ LVK+T++A G L+ LAL+NC  ITD GL+RV++ NP + KL +P C  +T EG+   
Sbjct: 212 DDTLVKLTNRAQGTLQHLALVNCLWITDSGLRRVLQSNPRLTKLSVPDCIRLTIEGILFH 271

Query: 139 VQTLCQRSNC-LSTLRINGIYN---LQKEHLDMLAMNLRKNVPLEEQQMQKPNYYHKRGS 194
           ++ L       +  LRI G+     +  +  D L   L  +  L +Q  QKP ++ +   
Sbjct: 272 LRALKSSGKLGIKHLRIGGLAGVCHVTDQQFDELKELLDASKYL-QQGDQKPQFFGEYSH 330

Query: 195 FTVFSREENQRIIDLETCPKCFEVTMVYDCPKVECMKREKPQVQCRGCKFCIPR 248
                  E+ R ID+E CP+C ++  VYDCP   C ++ +    CRGC  CI R
Sbjct: 331 IIC----EDDRAIDIEVCPRCKKLRPVYDCPAESCQQKHQASQLCRGCTICIAR 380