Miyakogusa Predicted Gene

Lj4g3v3099340.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3099340.1 tr|Q0PJK1|Q0PJK1_SOYBN MYB transcription factor
MYB184 OS=Glycine max GN=MYB184 PE=2
SV=1,81.58,0.00000000001,HTH_MYB,Myb domain; Myb_DNA-binding,SANT/Myb
domain; no description,Homeodomain-like; seg,NULL; Home,95918_g.1
         (157 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g04670.1                                                       220   5e-58
Glyma05g35050.1                                                       217   3e-57
Glyma09g31570.1                                                       114   3e-26

>Glyma08g04670.1 
          Length = 312

 Score =  220 bits (560), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 112/171 (65%), Positives = 126/171 (73%), Gaps = 15/171 (8%)

Query: 1   MPKLLQKAKESSSSAMSIIQNQDIPLPPDSVSQYSTIPTPIPWEGPCMNEAGPSYLDQHE 60
           MP+LLQKAKESSSS MSI QNQ IP+P D VSQ+ T+ T  PW+GPCMNEAGP+Y+DQHE
Sbjct: 142 MPRLLQKAKESSSSNMSI-QNQAIPMPFDYVSQHLTVGTIPPWQGPCMNEAGPTYMDQHE 200

Query: 61  ------HNNGSCKSFSESANIPKVPQQLGYTT-NQFHALDNNDFDTFTYDGF-------E 106
                 HNNGSC S SESANIPKVPQ  G+TT  QFHAL+ NDF TFTY+G+       E
Sbjct: 201 QNSDSEHNNGSCISLSESANIPKVPQHFGHTTITQFHALNTNDFGTFTYEGYNVNNNVYE 260

Query: 107 MDTFKMGAVKVTEDVQFSVGDCHMAESNWVHNDFACGMWNMDELWQFRNLQ 157
           MD FK     V ED Q+ +GDC M  SNWV+NDFAC MWNMDELWQF  LQ
Sbjct: 261 MDNFKTTTTWVAEDAQYPIGDCQMVGSNWVNNDFACNMWNMDELWQFSKLQ 311


>Glyma05g35050.1 
          Length = 317

 Score =  217 bits (553), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 112/176 (63%), Positives = 126/176 (71%), Gaps = 20/176 (11%)

Query: 1   MPKLLQKAKESSSSAMSIIQNQDIPLPPDSVSQYSTIPT-----PIPWEGPCMNEAGPSY 55
           MP+LLQKAKESSSSAMSI QNQ  P+P D VSQ+ST+ T       PW+GPCMNEAGP+Y
Sbjct: 142 MPRLLQKAKESSSSAMSI-QNQATPMPFDGVSQHSTVGTIPSHSHTPWQGPCMNEAGPTY 200

Query: 56  LDQHE------HNNGSCKSFSESANIPKVPQQLGYTT-NQFHALDNNDFDTFTYDGF--- 105
           +DQHE      HNNGSC S SESAN PKVPQ  G TT  Q+HAL+NNDF TFTYDG+   
Sbjct: 201 MDQHEQNSDSEHNNGSCISLSESANFPKVPQHFGRTTITQYHALNNNDFGTFTYDGYNVS 260

Query: 106 ----EMDTFKMGAVKVTEDVQFSVGDCHMAESNWVHNDFACGMWNMDELWQFRNLQ 157
               EMD FK    +V ED Q+  GDC M  SNWV++DFAC MWNMDELWQF  LQ
Sbjct: 261 NNVYEMDNFKTPTTRVAEDAQYPTGDCQMVGSNWVNSDFACNMWNMDELWQFSKLQ 316


>Glyma09g31570.1 
          Length = 306

 Score =  114 bits (286), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 98/172 (56%), Gaps = 25/172 (14%)

Query: 1   MPKLLQKAKESSSSAMSIIQNQDIPLPPDSVS--QYSTIPTPIPWEGPCMNEAGPSYLDQ 58
           M + L KA+ESS SAMSI Q+Q IPLP D V+   YS+             + G ++L+Q
Sbjct: 144 MTRYLHKAQESSPSAMSI-QDQAIPLPFDGVTIPHYSSFGIGTTPTTQITCQGGLNHLNQ 202

Query: 59  H------EHNNGSCKSFSESANIPKVPQQLGYTTNQFHALDNNDFDTFTYDG-------F 105
                  EHNNGSC S SESANIP + Q LG+TT+QF ALDN DF   +YDG       +
Sbjct: 203 QDQNSESEHNNGSCISSSESANIPYMSQPLGHTTSQFQALDNCDFGICSYDGYSIDNNSY 262

Query: 106 EMDTFKMGAVKVTEDVQFSVGDCHMAESNWVHNDFACGMWNMDELWQFRNLQ 157
           +MD   +    V E+++  V D  ++E  ++         NMDELWQFRN+Q
Sbjct: 263 DMDALNLTTTMVAENLELPVFDVQISEPYFM---------NMDELWQFRNIQ 305