Miyakogusa Predicted Gene

Lj4g3v3099310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3099310.1 Non Chatacterized Hit- tr|I0Z833|I0Z833_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,57.35,0.00000000000004,seg,NULL; CLEAVAGE STIMULATION FACTOR
64,NULL; RNA-BINDING PROTEIN,NULL; CSTF2_hinge,Cleavage
stimul,CUFF.52271.1
         (400 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g04650.1                                                       385   e-107
Glyma08g04620.1                                                       372   e-103
Glyma05g35080.1                                                       347   1e-95
Glyma08g04620.2                                                       336   2e-92
Glyma05g35080.3                                                       300   2e-81
Glyma05g35080.2                                                       300   2e-81
Glyma05g35080.4                                                       192   5e-49
Glyma13g18980.1                                                       133   3e-31

>Glyma10g04650.1 
          Length = 387

 Score =  385 bits (990), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 237/401 (59%), Positives = 249/401 (62%), Gaps = 15/401 (3%)

Query: 1   MAGKQVSXXXXXXXXXLTANLAGMSKNQLYDIMSQMKXXXXXXXXXXXXXXXXXPMLTKA 60
           MAGKQV          L+ NLAGMSKNQLYDIMSQMK                 PMLTKA
Sbjct: 1   MAGKQVGGEG------LSVNLAGMSKNQLYDIMSQMKSLIEQNQQQAKQILIQNPMLTKA 54

Query: 61  LFQAQIMLGXXXXXXXXXXXXXXX-XXXXXSVQSAXXXXXXXXXXXXGQGGAQDQAGVSQ 119
           LFQAQIMLG                     SVQ              G GGAQDQAGVSQ
Sbjct: 55  LFQAQIMLGMVQAPQTVPKVQPMVPQNNLQSVQPTQKPNIQPAPLLPGLGGAQDQAGVSQ 114

Query: 120 TQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXXXXXXXXXXXXXXX 179
           TQIPLRKHQNQPSVPVS +A PA+SHQS PMA  SL MPQQPKGH               
Sbjct: 115 TQIPLRKHQNQPSVPVS-SAVPALSHQSQPMAAQSLTMPQQPKGHLAPQVALASLPQSSQ 173

Query: 180 XXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXXXXXXXXSASSFHP 239
             NI              TQM TASS LQ PL  PGFPHM             +  +FHP
Sbjct: 174 LPNIPSPSLHSLSQPLHPTQMSTASSHLQHPLLTPGFPHMPLPPQIRQP----AMPTFHP 229

Query: 240 QYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXXXXXXXXXXXYPVG 299
           QYPPQMG+NLGFQHAGASHNL QSMFHPG KPPASVGS F QG             Y VG
Sbjct: 230 QYPPQMGANLGFQHAGASHNLSQSMFHPGTKPPASVGSTFPQGLPSQKSSQPP---YQVG 286

Query: 300 NMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSGQMGAANQPLRPPG 359
           N+P G +FGNQ GNAMQVDR + +  G S+NLA LSGP GPP +VSGQMGAANQPLRPP 
Sbjct: 287 NVPSGPEFGNQAGNAMQVDRGASLMPGPSDNLAHLSGPPGPPYVVSGQMGAANQPLRPPA 346

Query: 360 LTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           LTPDMEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 347 LTPDMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 387


>Glyma08g04620.1 
          Length = 392

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 234/402 (58%), Positives = 242/402 (60%), Gaps = 12/402 (2%)

Query: 1   MAGKQVSXXXXXXXXXLTANLAGMSKNQLYDIMSQMKXXXXXXXXXXXXXXXXXPMLTKA 60
           MAGKQV          L ANLAGMSKNQLYDIMSQMK                 PMLTKA
Sbjct: 1   MAGKQVGEG-------LPANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKA 53

Query: 61  LFQAQIMLGXXXXXXXXXXXXXXXXXXXXSVQSAXXXXXXXXXXXX-GQGGAQDQAGVSQ 119
           LFQAQIMLG                                      G GGAQDQAGVSQ
Sbjct: 54  LFQAQIMLGMVQAPQVVPKVQPMVSQNNQQPVQPTQQPNIQPAPLLPGHGGAQDQAGVSQ 113

Query: 120 TQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXXXXXXXXXXXXXXX 179
           TQIPLRKHQNQPSVPVS +A PA  HQS PMA HSL MPQ PKGH               
Sbjct: 114 TQIPLRKHQNQPSVPVS-SAVPAARHQSQPMAAHSLPMPQHPKGHPTPQMALVSLPQSSQ 172

Query: 180 XXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXXXXXXXXSASSFHP 239
             NI              TQM TASSQLQQP+Q  GF                +  +FHP
Sbjct: 173 LPNIPPPSLQSSSQPLHPTQMATASSQLQQPMQTSGF--PPLQPPLPPQIRPTALPTFHP 230

Query: 240 QYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXXXXXXXXXXXYPVG 299
           QYPPQMG+N+GFQHAGASHNL QSMFHPG KP ASVGS F QG             Y VG
Sbjct: 231 QYPPQMGANMGFQHAGASHNLPQSMFHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVG 290

Query: 300 NMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSGQMG-AANQPLRPP 358
           NMP G DFGNQ GNAMQVDR S    G SENLA LSGP GPPS+VSGQMG AA QPLRPP
Sbjct: 291 NMPLGPDFGNQAGNAMQVDRGSSWMLGPSENLAHLSGPPGPPSVVSGQMGAAAKQPLRPP 350

Query: 359 GLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           GLTP+MEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 351 GLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 392


>Glyma05g35080.1 
          Length = 379

 Score =  347 bits (891), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 227/402 (56%), Positives = 236/402 (58%), Gaps = 25/402 (6%)

Query: 1   MAGKQVSXXXXXXXXXLTANLAGMSKNQLYDIMSQMKXXXXXXXXXXXXXXXXXPMLTKA 60
           MAGK V          L ANLAGMSKNQLYDIMSQMK                 PMLTKA
Sbjct: 1   MAGKHVGGEG------LAANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKA 54

Query: 61  LFQAQIMLGXXXXXXXXXXXX-XXXXXXXXSVQSAXXXXXXXXXXXXGQGGAQDQAGVSQ 119
           LFQAQIMLG                     SVQ              G GGAQDQAGVSQ
Sbjct: 55  LFQAQIMLGMVQAPQVVSKVRPMVSQSNQQSVQLIQKPNIQPAPLLPGHGGAQDQAGVSQ 114

Query: 120 TQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXXXXXXXXXXXXXXX 179
           TQIPLRKHQNQPSVP+S +A PAMSHQS PMA HSL MPQQ KGH               
Sbjct: 115 TQIPLRKHQNQPSVPIS-SAVPAMSHQSQPMAAHSLPMPQQHKGHPTPQMAPVSLPQSSQ 173

Query: 180 XXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXXXXXXXXSASSFHP 239
             N+              TQM TASSQLQQPLQ  GF                +  +FHP
Sbjct: 174 LPNVPLPSLHQ-------TQMATASSQLQQPLQTSGF--PPLQPPLPPQIRPTALPTFHP 224

Query: 240 QYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXXXXXXXXXXXYPVG 299
           QYPPQ+G+N+GFQHAG SHNL QSM HPG KP ASVGS F QG             Y VG
Sbjct: 225 QYPPQVGANMGFQHAGTSHNLPQSMIHPGTKPSASVGSTFPQGQTPLPGQPSSQPPYQVG 284

Query: 300 NMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSGQM-GAANQPLRPP 358
           NMP G DFGNQ GNAMQVDR S    G SENLA LSGP        GQM  AANQ LRPP
Sbjct: 285 NMPLGPDFGNQAGNAMQVDRGSSWLPGPSENLAHLSGP-------PGQMSAAANQLLRPP 337

Query: 359 GLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           GLTP+MEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 338 GLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 379


>Glyma08g04620.2 
          Length = 344

 Score =  336 bits (862), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 207/347 (59%), Positives = 215/347 (61%), Gaps = 5/347 (1%)

Query: 56  MLTKALFQAQIMLGXXXXXXXXXXXXXXXXXXXXSVQSAXXXXXXXXXXX-XGQGGAQDQ 114
           MLTKALFQAQIMLG                                      G GGAQDQ
Sbjct: 1   MLTKALFQAQIMLGMVQAPQVVPKVQPMVSQNNQQPVQPTQQPNIQPAPLLPGHGGAQDQ 60

Query: 115 AGVSQTQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXXXXXXXXXX 174
           AGVSQTQIPLRKHQNQPSVPVS +A PA  HQS PMA HSL MPQ PKGH          
Sbjct: 61  AGVSQTQIPLRKHQNQPSVPVS-SAVPAARHQSQPMAAHSLPMPQHPKGHPTPQMALVSL 119

Query: 175 XXXXXXXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXXXXXXXXSA 234
                  NI              TQM TASSQLQQP+Q  GF                + 
Sbjct: 120 PQSSQLPNIPPPSLQSSSQPLHPTQMATASSQLQQPMQTSGF--PPLQPPLPPQIRPTAL 177

Query: 235 SSFHPQYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXXXXXXXXXX 294
            +FHPQYPPQMG+N+GFQHAGASHNL QSMFHPG KP ASVGS F QG            
Sbjct: 178 PTFHPQYPPQMGANMGFQHAGASHNLPQSMFHPGTKPSASVGSTFPQGQTPLPGQPSSQP 237

Query: 295 XYPVGNMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSGQMG-AANQ 353
            Y VGNMP G DFGNQ GNAMQVDR S    G SENLA LSGP GPPS+VSGQMG AA Q
Sbjct: 238 PYQVGNMPLGPDFGNQAGNAMQVDRGSSWMLGPSENLAHLSGPPGPPSVVSGQMGAAAKQ 297

Query: 354 PLRPPGLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           PLRPPGLTP+MEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 298 PLRPPGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 344


>Glyma05g35080.3 
          Length = 319

 Score =  300 bits (768), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/295 (62%), Positives = 193/295 (65%), Gaps = 18/295 (6%)

Query: 107 GQGGAQDQAGVSQTQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXX 166
           G GGAQDQAGVSQTQIPLRKHQNQPSVP+S +A PAMSHQS PMA HSL MPQQ KGH  
Sbjct: 42  GHGGAQDQAGVSQTQIPLRKHQNQPSVPIS-SAVPAMSHQSQPMAAHSLPMPQQHKGHPT 100

Query: 167 XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXX 226
                          N+              TQM TASSQLQQPLQ  GF          
Sbjct: 101 PQMAPVSLPQSSQLPNVPLPSLHQ-------TQMATASSQLQQPLQTSGF--PPLQPPLP 151

Query: 227 XXXXXXSASSFHPQYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXX 286
                 +  +FHPQYPPQ+G+N+GFQHAG SHNL QSM HPG KP ASVGS F QG    
Sbjct: 152 PQIRPTALPTFHPQYPPQVGANMGFQHAGTSHNLPQSMIHPGTKPSASVGSTFPQGQTPL 211

Query: 287 XXXXXXXXXYPVGNMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSG 346
                    Y VGNMP G DFGNQ GNAMQVDR S    G SENLA LSGP        G
Sbjct: 212 PGQPSSQPPYQVGNMPLGPDFGNQAGNAMQVDRGSSWLPGPSENLAHLSGP-------PG 264

Query: 347 QM-GAANQPLRPPGLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           QM  AANQ LRPPGLTP+MEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 265 QMSAAANQLLRPPGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 319


>Glyma05g35080.2 
          Length = 303

 Score =  300 bits (768), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/295 (62%), Positives = 193/295 (65%), Gaps = 18/295 (6%)

Query: 107 GQGGAQDQAGVSQTQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXX 166
           G GGAQDQAGVSQTQIPLRKHQNQPSVP+S +A PAMSHQS PMA HSL MPQQ KGH  
Sbjct: 26  GHGGAQDQAGVSQTQIPLRKHQNQPSVPIS-SAVPAMSHQSQPMAAHSLPMPQQHKGHPT 84

Query: 167 XXXXXXXXXXXXXXXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXX 226
                          N+              TQM TASSQLQQPLQ  GF          
Sbjct: 85  PQMAPVSLPQSSQLPNVPLPSLHQ-------TQMATASSQLQQPLQTSGF--PPLQPPLP 135

Query: 227 XXXXXXSASSFHPQYPPQMGSNLGFQHAGASHNLQQSMFHPGAKPPASVGSAFTQGXXXX 286
                 +  +FHPQYPPQ+G+N+GFQHAG SHNL QSM HPG KP ASVGS F QG    
Sbjct: 136 PQIRPTALPTFHPQYPPQVGANMGFQHAGTSHNLPQSMIHPGTKPSASVGSTFPQGQTPL 195

Query: 287 XXXXXXXXXYPVGNMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSG 346
                    Y VGNMP G DFGNQ GNAMQVDR S    G SENLA LSGP        G
Sbjct: 196 PGQPSSQPPYQVGNMPLGPDFGNQAGNAMQVDRGSSWLPGPSENLAHLSGP-------PG 248

Query: 347 QM-GAANQPLRPPGLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           QM  AANQ LRPPGLTP+MEKALLQQVMSLTPEQIN LPPEQRNQVLQLQQMLRQ
Sbjct: 249 QMSAAANQLLRPPGLTPEMEKALLQQVMSLTPEQINLLPPEQRNQVLQLQQMLRQ 303


>Glyma05g35080.4 
          Length = 259

 Score =  192 bits (489), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/267 (49%), Positives = 141/267 (52%), Gaps = 17/267 (6%)

Query: 1   MAGKQVSXXXXXXXXXLTANLAGMSKNQLYDIMSQMKXXXXXXXXXXXXXXXXXPMLTKA 60
           MAGK V          L ANLAGMSKNQLYDIMSQMK                 PMLTKA
Sbjct: 1   MAGKHVGGEG------LAANLAGMSKNQLYDIMSQMKNLIEQNQQQARQILIQNPMLTKA 54

Query: 61  LFQAQIMLGXXXXXXXXXXXX-XXXXXXXXSVQSAXXXXXXXXXXXXGQGGAQDQAGVSQ 119
           LFQAQIMLG                     SVQ              G GGAQDQAGVSQ
Sbjct: 55  LFQAQIMLGMVQAPQVVSKVRPMVSQSNQQSVQLIQKPNIQPAPLLPGHGGAQDQAGVSQ 114

Query: 120 TQIPLRKHQNQPSVPVSYAATPAMSHQSPPMAGHSLQMPQQPKGHXXXXXXXXXXXXXXX 179
           TQIPLRKHQNQPSVP+S +A PAMSHQS PMA HSL MPQQ KGH               
Sbjct: 115 TQIPLRKHQNQPSVPIS-SAVPAMSHQSQPMAAHSLPMPQQHKGHPTPQMAPVSLPQSSQ 173

Query: 180 XXNIXXXXXXXXXXXXXXTQMQTASSQLQQPLQAPGFPHMXXXXXXXXXXXXXSASSFHP 239
             N+              TQM TASSQLQQPLQ  GF                +  +FHP
Sbjct: 174 LPNV-------PLPSLHQTQMATASSQLQQPLQTSGF--PPLQPPLPPQIRPTALPTFHP 224

Query: 240 QYPPQMGSNLGFQHAGASHNLQQSMFH 266
           QYPPQ+G+N+GFQHAG SHNL QSM H
Sbjct: 225 QYPPQVGANMGFQHAGTSHNLPQSMIH 251


>Glyma13g18980.1 
          Length = 132

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 76/103 (73%), Positives = 80/103 (77%), Gaps = 2/103 (1%)

Query: 298 VGNMPFGHDFGNQGGNAMQVDRVSRMHGGHSENLAQLSGPLGPPSLVSGQMGAANQPLRP 357
           VGNMP G +FGNQ GNA QVDR S +    S+NLA LSGP  P  +VS QMGAANQPLRP
Sbjct: 32  VGNMPLGPEFGNQAGNATQVDRGSSLMPSPSDNLAHLSGP--PGYVVSAQMGAANQPLRP 89

Query: 358 PGLTPDMEKALLQQVMSLTPEQINHLPPEQRNQVLQLQQMLRQ 400
           P LTPDMEKALLQQV SLT  QIN L PEQRNQVLQLQQML Q
Sbjct: 90  PVLTPDMEKALLQQVTSLTLGQINLLSPEQRNQVLQLQQMLHQ 132