Miyakogusa Predicted Gene
- Lj4g3v3099180.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3099180.1 Non Chatacterized Hit- tr|B8AAP3|B8AAP3_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,88.46,0.00004,SUBFAMILY NOT NAMED,NULL; F-BOX AND WD40 DOMAIN
PROTEIN,NULL; Domain always found upstream of DENN d,CUFF.52301.1
(286 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g04510.1 493 e-140
Glyma17g05790.2 55 1e-07
Glyma13g16930.2 55 1e-07
Glyma13g16930.1 55 1e-07
Glyma17g05790.1 55 1e-07
Glyma09g08000.2 52 1e-06
Glyma09g08000.1 51 1e-06
Glyma15g19470.1 51 2e-06
>Glyma08g04510.1
Length = 1197
Score = 493 bits (1270), Expect = e-140, Method: Compositional matrix adjust.
Identities = 238/286 (83%), Positives = 255/286 (89%)
Query: 1 MSRIFEYFVVCGIGPEIRTVDGSKGYHGPACMYLPSLLDQYXXXXXXXXXXXXXXXXXXX 60
MSRIFEYFVVCGIGPEIRT+DG+KGYHG C+YLPSLLDQY
Sbjct: 1 MSRIFEYFVVCGIGPEIRTMDGNKGYHGTGCLYLPSLLDQYPPPNHTLYPSPPPQLSTCV 60
Query: 61 XXAGVEFYSSGFDSSDPSTFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN 120
AGVEFYSSGFDS+DP++FPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN
Sbjct: 61 LPAGVEFYSSGFDSNDPASFPRSYPIVLTEGDGSKIYVSCISFRDPVCEDIAEAYRIQAN 120
Query: 121 SYADKCICLVSRSPSFRVIRTALEELFALCFSPNGSSKPLWDVIAHVVSSVPLPTPGKER 180
SYADKCICLVSR PSFRV+++ALEE+FALCFSPNGSSKPLWDVIAH+VSSVPLPTPGKER
Sbjct: 121 SYADKCICLVSRLPSFRVLKSALEEIFALCFSPNGSSKPLWDVIAHMVSSVPLPTPGKER 180
Query: 181 VLFAIENCLLPVEAPPNHGLPYVDISFQPLVQCLDVENLIILFTAVLIERRILLRANKYS 240
VLFAIE+CLL VEAPP LP+ DISFQPLVQCLDV+NL+ LFTAVL+ERRILLRANKYS
Sbjct: 181 VLFAIESCLLSVEAPPIDWLPHADISFQPLVQCLDVDNLLSLFTAVLLERRILLRANKYS 240
Query: 241 LLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLHS 286
LLTL SEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGL+S
Sbjct: 241 LLTLASEAICHLIYPFRWQHVYIPLLFFSGVDYIDAPTPYMMGLYS 286
>Glyma17g05790.2
Length = 794
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 49/77 (63%)
Query: 210 LVQCLDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFS 269
L L +EN++ F VL+E++I++ + +L+ ++ LI P+RWQ + +P+L
Sbjct: 582 LCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASILSVIPLIQPYRWQSLLMPVLPND 641
Query: 270 GVDYIDAPTPYMMGLHS 286
++++DAP PY++G+ +
Sbjct: 642 MLEFLDAPVPYVVGIKN 658
>Glyma13g16930.2
Length = 775
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 49/77 (63%)
Query: 210 LVQCLDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFS 269
L L +EN++ F VL+E++I++ + +L+ ++ LI P+RWQ + +P+L
Sbjct: 553 LCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPND 612
Query: 270 GVDYIDAPTPYMMGLHS 286
++++DAP PY++G+ +
Sbjct: 613 MLEFLDAPVPYVVGIKN 629
>Glyma13g16930.1
Length = 775
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 49/77 (63%)
Query: 210 LVQCLDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFS 269
L L +EN++ F VL+E++I++ + +L+ ++ LI P+RWQ + +P+L
Sbjct: 553 LCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASVLSVIPLIQPYRWQSLLMPVLPND 612
Query: 270 GVDYIDAPTPYMMGLHS 286
++++DAP PY++G+ +
Sbjct: 613 MLEFLDAPVPYVVGIKN 629
>Glyma17g05790.1
Length = 804
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 49/77 (63%)
Query: 210 LVQCLDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFS 269
L L +EN++ F VL+E++I++ + +L+ ++ LI P+RWQ + +P+L
Sbjct: 582 LCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSASILSVIPLIQPYRWQSLLMPVLPND 641
Query: 270 GVDYIDAPTPYMMGLHS 286
++++DAP PY++G+ +
Sbjct: 642 MLEFLDAPVPYVVGIKN 658
>Glyma09g08000.2
Length = 737
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%)
Query: 214 LDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDY 273
L +EN++ F L+E++I+ + +L+ ++ LI P++WQ + +P+L +++
Sbjct: 589 LRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEF 648
Query: 274 IDAPTPYMMGLHS 286
+DAP PY++G+ +
Sbjct: 649 LDAPVPYIVGIKN 661
>Glyma09g08000.1
Length = 808
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%)
Query: 214 LDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDY 273
L +EN++ F L+E++I+ + +L+ ++ LI P++WQ + +P+L +++
Sbjct: 589 LRLENVLTFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEF 648
Query: 274 IDAPTPYMMGLHS 286
+DAP PY++G+ +
Sbjct: 649 LDAPVPYIVGIKN 661
>Glyma15g19470.1
Length = 832
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 46/73 (63%)
Query: 214 LDVENLIILFTAVLIERRILLRANKYSLLTLVSEAICHLIYPFRWQHVYIPLLFFSGVDY 273
L +EN++ F L+E++I+ + +L+ ++ LI P++WQ + +P+L +++
Sbjct: 613 LRLENVLAFFAGALLEKQIVFVCSNLGILSASVLSVIPLIRPYQWQSLLMPVLPNGMLEF 672
Query: 274 IDAPTPYMMGLHS 286
+DAP PY++G+ +
Sbjct: 673 LDAPVPYIVGIKN 685