Miyakogusa Predicted Gene
- Lj4g3v3098140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3098140.1 tr|G7L906|G7L906_MEDTR Peptidyl-tRNA hydrolase
OS=Medicago truncatula GN=MTR_8g103890 PE=3 SV=1,78.43,0,seg,NULL;
Peptidyl-tRNA hydrolase-like,Peptidyl-tRNA hydrolase;
PEPT_TRNA_HYDROL_1,Peptidyl-tRNA
hyd,NODE_4872_length_1362_cov_54.908222.path2.1
(255 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g35220.1 369 e-102
Glyma08g04500.1 353 1e-97
Glyma08g12110.1 243 1e-64
Glyma05g28940.1 242 3e-64
Glyma18g53310.1 231 6e-61
Glyma08g48210.1 197 8e-51
Glyma05g23140.1 74 1e-13
>Glyma05g35220.1
Length = 259
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 179/199 (89%), Positives = 190/199 (95%)
Query: 57 KKKEPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPV 116
K+ PWLIVGLGNPGKKYA+TRHNVGFEMVDTIAEAEGIS+ +VSFK+LFGKG IGDVPV
Sbjct: 61 KEASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKSLFGKGFIGDVPV 120
Query: 117 ILAKPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKS 176
ILAKPQTYMN SGESVGAIVSYYKIP+KQVLVIFDD+DLPFAKLRLLPKGGHGGHNGMKS
Sbjct: 121 ILAKPQTYMNSSGESVGAIVSYYKIPLKQVLVIFDDLDLPFAKLRLLPKGGHGGHNGMKS 180
Query: 177 VINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLE 236
VINHFKGN GFPRLRIGIGRPPGKMDPVAFVLR+FTK EREEL+FTLQ GLEAVRILLLE
Sbjct: 181 VINHFKGNSGFPRLRIGIGRPPGKMDPVAFVLRTFTKHEREELNFTLQDGLEAVRILLLE 240
Query: 237 GFDKSATFVNSSKKMEQIG 255
GFDKSATFVNS+KK+EQ G
Sbjct: 241 GFDKSATFVNSAKKIEQTG 259
>Glyma08g04500.1
Length = 235
Score = 353 bits (906), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 176/205 (85%), Positives = 190/205 (92%), Gaps = 4/205 (1%)
Query: 55 QPKKKE---PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVI 111
+ KKKE PWLIVGLGNPGKKYA+TRHNVGFEMVDTIAEAEGIS+ +VSFKALFGKG I
Sbjct: 31 KEKKKEAASPWLIVGLGNPGKKYAATRHNVGFEMVDTIAEAEGISMTTVSFKALFGKGFI 90
Query: 112 GDVPVILAKPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGH 171
GDVPVILAKPQT+MNLSGESVG IVSYYKIPVKQVLVI DD+DLPFAKL+LLPKGGHGGH
Sbjct: 91 GDVPVILAKPQTFMNLSGESVGTIVSYYKIPVKQVLVIVDDLDLPFAKLQLLPKGGHGGH 150
Query: 172 NGMKSVINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQE-REELDFTLQHGLEAV 230
NGMKSVINHFKGN GFPRLRIGIGRPPGKMDPVAFVL +FTKQ+ + L+FTL+ GLEAV
Sbjct: 151 NGMKSVINHFKGNTGFPRLRIGIGRPPGKMDPVAFVLHTFTKQKGKRYLNFTLRDGLEAV 210
Query: 231 RILLLEGFDKSATFVNSSKKMEQIG 255
RILLLEGFDKSATFVNS+KK+EQ G
Sbjct: 211 RILLLEGFDKSATFVNSAKKIEQTG 235
>Glyma08g12110.1
Length = 218
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 146/195 (74%)
Query: 60 EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILA 119
PWL VGLGNPG K+ TRHNVGFEM+D AE++GI +++V KA+FGKG +G+VPV LA
Sbjct: 16 RPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAIFGKGFVGEVPVFLA 75
Query: 120 KPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIN 179
KPQTYMNLSGES G + +YYK+P+ QVLV DDM+LP LRL KGGHG H G+KSVI
Sbjct: 76 KPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIY 135
Query: 180 HFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFD 239
+F+GN FPRLRIGIG PPG+MDP AF+L+ F R+ +D LQ G++A+++LL +G
Sbjct: 136 NFRGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGIDALKLLLSKGLT 195
Query: 240 KSATFVNSSKKMEQI 254
+SA N +K + +
Sbjct: 196 ESAKRFNKEQKYKHL 210
>Glyma05g28940.1
Length = 217
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 145/195 (74%)
Query: 60 EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILA 119
PWL VGLGNPG+K+ TRHNVGFEM+D AE++GI +++V KA+ GKG +G+VPV LA
Sbjct: 16 RPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKAISGKGFVGEVPVFLA 75
Query: 120 KPQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVIN 179
KPQTYMNLSGES G + +YYK+P+ QVLV DDM+LP LRL KGGHG H G+KSVI
Sbjct: 76 KPQTYMNLSGESTGPLAAYYKLPLNQVLVFHDDMNLPCGVLRLHDKGGHGSHKGLKSVIY 135
Query: 180 HFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFD 239
HFKGN FPRLRIGIG PPG+MDP AF+L+ F R+ +D LQ G++A+++LL +G
Sbjct: 136 HFKGNREFPRLRIGIGSPPGQMDPKAFLLQKFNVTARQRIDEALQEGVDALKLLLSKGLA 195
Query: 240 KSATFVNSSKKMEQI 254
SA N +K + +
Sbjct: 196 VSAKRFNKEQKYKHL 210
>Glyma18g53310.1
Length = 244
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 143/192 (74%)
Query: 61 PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGDVPVILAK 120
PWLI+GLGNPG KY TRH VGFE++D+++ AEGI +N++ KAL G G IG+VP++LAK
Sbjct: 49 PWLIIGLGNPGNKYHGTRHKVGFEIIDSLSRAEGIQMNTIQSKALIGIGSIGEVPILLAK 108
Query: 121 PQTYMNLSGESVGAIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMKSVINH 180
PQTYMN SGESVG + +YY++P++ +L++FD+ LP LRL PKGGHG HNG+K+V+ H
Sbjct: 109 PQTYMNFSGESVGPLAAYYQVPLRHILLVFDETSLPNGVLRLQPKGGHGHHNGLKNVMGH 168
Query: 181 FKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLLEGFDK 240
G FPRL +GIG PPG MD A++L+ F+ +ER+++D +L+ + AVR ++L GFD+
Sbjct: 169 LDGCSAFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVAAVRTVVLNGFDQ 228
Query: 241 SATFVNSSKKME 252
N +K +
Sbjct: 229 HVNRFNLGQKYK 240
>Glyma08g48210.1
Length = 203
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 136/195 (69%), Gaps = 9/195 (4%)
Query: 61 PWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVIGD--VPVIL 118
PWLIVGLGNPG KY TR NVGFE++D ++ AEGI IN++ KAL G V+ + VP++L
Sbjct: 7 PWLIVGLGNPGYKYHGTRDNVGFEIIDILSRAEGIQINTIQSKALIGISVLLEIEVPILL 66
Query: 119 AKPQTYMNLSGESVG---AIVSYYKIPVKQVLVIFDDMDLPFAKLRLLPKGGHGGHNGMK 175
AKPQTYMN SGESV + +YY++P++ +L++ + + LRL PKGGHG HNG+K
Sbjct: 67 AKPQTYMNFSGESVSWAMPLAAYYQLPLRHILLVC----ISYVILRLQPKGGHGHHNGLK 122
Query: 176 SVINHFKGNLGFPRLRIGIGRPPGKMDPVAFVLRSFTKQEREELDFTLQHGLEAVRILLL 235
+V+ H G FPRL +GIG PPG MD A++L+ F+ +ER+++D +L+ + AVR ++L
Sbjct: 123 NVMGHLDGCSDFPRLAVGIGNPPGTMDLRAYLLQKFSVEERKQIDASLEQAVGAVRTVVL 182
Query: 236 EGFDKSATFVNSSKK 250
GFD+ N +K
Sbjct: 183 NGFDQHVNRFNLGQK 197
>Glyma05g23140.1
Length = 105
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%)
Query: 60 EPWLIVGLGNPGKKYASTRHNVGFEMVDTIAEAEGISINSVSFKALFGKGVI 111
PWL +GLGNP K+ T+HNVGFEM+D A+++GI +++V FKA+FGKG +
Sbjct: 16 RPWLFMGLGNPSDKFKGTKHNVGFEMIDAFAKSQGIPMDTVHFKAIFGKGTV 67