Miyakogusa Predicted Gene

Lj4g3v3095000.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3095000.3 Non Chatacterized Hit- tr|J3L1T2|J3L1T2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G3,45.16,7e-19,Exo_endo_phos,
Endonuclease/exonuclease/phosphatase; CARBON CATABOLITE REPRESSOR
PROTEIN 4-RELATED,NU,CUFF.52254.3
         (194 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g35240.1                                                       248   3e-66
Glyma13g33430.1                                                       137   5e-33
Glyma14g15270.1                                                       136   1e-32
Glyma09g15980.2                                                        81   6e-16
Glyma09g15980.1                                                        81   6e-16
Glyma19g39210.1                                                        79   3e-15
Glyma03g36550.2                                                        79   3e-15
Glyma03g36550.1                                                        79   3e-15
Glyma19g39210.3                                                        79   4e-15
Glyma19g39210.2                                                        79   4e-15
Glyma02g26620.2                                                        75   6e-14
Glyma02g26620.1                                                        75   6e-14
Glyma09g35040.2                                                        73   2e-13
Glyma09g35040.3                                                        73   2e-13
Glyma09g35040.1                                                        72   3e-13
Glyma07g10140.1                                                        71   7e-13
Glyma17g31100.1                                                        61   9e-10

>Glyma05g35240.1 
          Length = 435

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 120/166 (72%), Positives = 133/166 (80%), Gaps = 3/166 (1%)

Query: 28  PFSSSFKF--TASQQPHFHRRRGHPPQFQRHWVEALDHQSLAFSERFTVASYNILADRNA 85
           P S+ FKF    + Q  +H R  + PQ +RHWVEA D QSLA  ERF+VASYNIL DRNA
Sbjct: 25  PTSTCFKFDVPVASQIQWHTRSRNIPQIKRHWVEASD-QSLASQERFSVASYNILGDRNA 83

Query: 86  FHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEVDKYLELSNILVKAGYTGYY 145
             H DLY+NVP  +I W RRK VIC ELFGW+PDIICLQEVDKY ELS+I+VKAGY G Y
Sbjct: 84  SQHSDLYVNVPSRYINWGRRKRVICDELFGWDPDIICLQEVDKYFELSDIMVKAGYAGSY 143

Query: 146 KRRTGDSVDGCAMFWKADKFRLLDGESIQFKDIGLRDNVAQLLVFE 191
           KRRTGD+ DGCAMFWKADKFRLL+GESIQFKDIGLRDNVAQL VFE
Sbjct: 144 KRRTGDAADGCAMFWKADKFRLLEGESIQFKDIGLRDNVAQLSVFE 189


>Glyma13g33430.1 
          Length = 502

 Score =  137 bits (346), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 65/142 (45%), Positives = 94/142 (66%), Gaps = 1/142 (0%)

Query: 50  PPQFQRHWVEALDHQSLAFSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVI 109
           P + +R WV +    S   +++  V SYNIL   NA +H DLY N+P+ F++WDRRK +I
Sbjct: 24  PLECRRRWVVS-SKDSSNCTDKVLVVSYNILGVENASNHPDLYSNIPHSFLEWDRRKRLI 82

Query: 110 CHELFGWNPDIICLQEVDKYLELSNILVKAGYTGYYKRRTGDSVDGCAMFWKADKFRLLD 169
             E+  +N  I+C QEVD + +L ++   +G+ G YK RTG++ DGCA+FWK   F+LL 
Sbjct: 83  LEEINNYNASILCFQEVDHFNDLDDLFQNSGFKGVYKARTGEAQDGCAVFWKDKLFKLLH 142

Query: 170 GESIQFKDIGLRDNVAQLLVFE 191
            E I+F+  G+R+NVAQL VFE
Sbjct: 143 QEDIEFQRFGMRNNVAQLCVFE 164


>Glyma14g15270.1 
          Length = 852

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/146 (49%), Positives = 89/146 (60%), Gaps = 2/146 (1%)

Query: 47  RGHPPQFQRHWVEALDHQSLAFSERFTVASYNILADRNAFHHR-DLYLNVPYPFIKWDRR 105
           R  PP + R W  A         ERF V SYNILAD  A  HR  LY ++P   + W  R
Sbjct: 135 RPRPPDY-RDWELAWTPPPPPHCERFKVLSYNILADYLALDHRTKLYFHIPRHILDWQWR 193

Query: 106 KTVICHELFGWNPDIICLQEVDKYLELSNILVKAGYTGYYKRRTGDSVDGCAMFWKADKF 165
           K  I  EL  W+ DI+CLQEVD++ EL   L   GY+G +K RTG+ VDGCA+FW+  +F
Sbjct: 194 KRSIIFELGLWSADILCLQEVDRFHELEEELKPKGYSGIWKMRTGNPVDGCAIFWRNSRF 253

Query: 166 RLLDGESIQFKDIGLRDNVAQLLVFE 191
           +LL  E I+F  +GLRDNVAQL V E
Sbjct: 254 KLLYEECIEFNKLGLRDNVAQLCVLE 279


>Glyma09g15980.2 
          Length = 600

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 32/159 (20%)

Query: 66  LAFSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQE 125
           +  S  FTV SYN+L++  A+   DLY   P   + W  R+  +  E+ G+ PDIICLQE
Sbjct: 244 MTSSGTFTVLSYNVLSE--AYASNDLYNYCPSWALSWPYRRQNLLREIIGYRPDIICLQE 301

Query: 126 V--DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQF 175
           V  D Y E  S  L K GY G YKR+T +       ++DGCA F++ D+F  +    ++F
Sbjct: 302 VQSDHYDEFFSPELDKHGYHGLYKRKTNEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEF 361

Query: 176 KDIG--------------------LRDNVAQLLVFEADV 194
                                   ++DNVA ++V EA V
Sbjct: 362 NKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKV 400


>Glyma09g15980.1 
          Length = 600

 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 79/159 (49%), Gaps = 32/159 (20%)

Query: 66  LAFSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQE 125
           +  S  FTV SYN+L++  A+   DLY   P   + W  R+  +  E+ G+ PDIICLQE
Sbjct: 244 MTSSGTFTVLSYNVLSE--AYASNDLYNYCPSWALSWPYRRQNLLREIIGYRPDIICLQE 301

Query: 126 V--DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQF 175
           V  D Y E  S  L K GY G YKR+T +       ++DGCA F++ D+F  +    ++F
Sbjct: 302 VQSDHYDEFFSPELDKHGYHGLYKRKTNEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEF 361

Query: 176 KDIG--------------------LRDNVAQLLVFEADV 194
                                   ++DNVA ++V EA V
Sbjct: 362 NKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKV 400


>Glyma19g39210.1 
          Length = 600

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 32/156 (20%)

Query: 69  SERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEV-- 126
           S  FTV SYNIL+D  A+   DLY   P   + W  R+  +  E+ G+  DIICLQEV  
Sbjct: 247 SGTFTVLSYNILSD--AYASNDLYNYCPTWALSWPYRRQNLLREIVGYRADIICLQEVQS 304

Query: 127 DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQFKDI 178
           D Y +  S  L K GY G+YKR+T +       ++DGCA F++ D+F  +    ++F   
Sbjct: 305 DHYEDFFSPELDKHGYYGFYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKA 364

Query: 179 G--------------------LRDNVAQLLVFEADV 194
                                ++DN+A ++V EA V
Sbjct: 365 AQSLTDAVIPTTQKKTALNRLVKDNIALIVVLEAKV 400


>Glyma03g36550.2 
          Length = 602

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 32/156 (20%)

Query: 69  SERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEV-- 126
           S  FTV SYNIL+D  A+   DLY   P   + W  R+  +  E+ G+  DIICLQEV  
Sbjct: 249 SGTFTVLSYNILSD--AYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQS 306

Query: 127 DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQFKDI 178
           D Y E  S  L K GY G YK++T +       ++DGCA F++ D+F  +    ++F   
Sbjct: 307 DHYEEFFSPELDKHGYYGLYKKKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKA 366

Query: 179 G--------------------LRDNVAQLLVFEADV 194
                                ++DNVA ++V EA V
Sbjct: 367 AQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKV 402


>Glyma03g36550.1 
          Length = 602

 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 77/156 (49%), Gaps = 32/156 (20%)

Query: 69  SERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEV-- 126
           S  FTV SYNIL+D  A+   DLY   P   + W  R+  +  E+ G+  DIICLQEV  
Sbjct: 249 SGTFTVLSYNILSD--AYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQS 306

Query: 127 DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQFKDI 178
           D Y E  S  L K GY G YK++T +       ++DGCA F++ D+F  +    ++F   
Sbjct: 307 DHYEEFFSPELDKHGYYGLYKKKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKA 366

Query: 179 G--------------------LRDNVAQLLVFEADV 194
                                ++DNVA ++V EA V
Sbjct: 367 AQSLTDAVIPTTQKKTALNRLVKDNVALIVVLEAKV 402


>Glyma19g39210.3 
          Length = 516

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 32/156 (20%)

Query: 69  SERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEV-- 126
           S  FTV SYNIL+D  A+   DLY   P   + W  R+  +  E+ G+  DIICLQEV  
Sbjct: 247 SGTFTVLSYNILSD--AYASNDLYNYCPTWALSWPYRRQNLLREIVGYRADIICLQEVQS 304

Query: 127 DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQFKDI 178
           D Y +  S  L K GY G+YKR+T +       ++DGCA F++ D+F  +    ++F   
Sbjct: 305 DHYEDFFSPELDKHGYYGFYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKA 364

Query: 179 G--------------------LRDNVAQLLVFEADV 194
                                ++DN+A ++V EA V
Sbjct: 365 AQSLTDAVIPTTQKKTALNRLVKDNIALIVVLEAKV 400


>Glyma19g39210.2 
          Length = 516

 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 32/156 (20%)

Query: 69  SERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEV-- 126
           S  FTV SYNIL+D  A+   DLY   P   + W  R+  +  E+ G+  DIICLQEV  
Sbjct: 247 SGTFTVLSYNILSD--AYASNDLYNYCPTWALSWPYRRQNLLREIVGYRADIICLQEVQS 304

Query: 127 DKYLE-LSNILVKAGYTGYYKRRTGD-------SVDGCAMFWKADKFRLLDGESIQFKDI 178
           D Y +  S  L K GY G+YKR+T +       ++DGCA F++ D+F  +    ++F   
Sbjct: 305 DHYEDFFSPELDKHGYYGFYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKA 364

Query: 179 G--------------------LRDNVAQLLVFEADV 194
                                ++DN+A ++V EA V
Sbjct: 365 AQSLTDAVIPTTQKKTALNRLVKDNIALIVVLEAKV 400


>Glyma02g26620.2 
          Length = 590

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 10/118 (8%)

Query: 66  LAFSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQE 125
           +  S  FTV SYN+L++  A+   DLY   P   + W  R+  +  E+ G+ PDIICLQE
Sbjct: 244 MTSSGTFTVLSYNVLSE--AYASNDLYNYCPSWALSWPYRRQNLLREIVGYRPDIICLQE 301

Query: 126 V--DKYLE-LSNILVKAGYTGYYKRR-----TGDSVDGCAMFWKADKFRLLDGESIQF 175
           V  D Y E  S  L K GY G YKR+       +++DGCA F++ D+F  +    ++F
Sbjct: 302 VQSDHYDEFFSPELDKHGYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEF 359


>Glyma02g26620.1 
          Length = 590

 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 10/118 (8%)

Query: 66  LAFSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQE 125
           +  S  FTV SYN+L++  A+   DLY   P   + W  R+  +  E+ G+ PDIICLQE
Sbjct: 244 MTSSGTFTVLSYNVLSE--AYASNDLYNYCPSWALSWPYRRQNLLREIVGYRPDIICLQE 301

Query: 126 V--DKYLE-LSNILVKAGYTGYYKRR-----TGDSVDGCAMFWKADKFRLLDGESIQF 175
           V  D Y E  S  L K GY G YKR+       +++DGCA F++ D+F  +    ++F
Sbjct: 302 VQSDHYDEFFSPELDKHGYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEF 359


>Glyma09g35040.2 
          Length = 252

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 22/172 (12%)

Query: 9   SSCLIASFSSFTNTANRHDPFSSSF-KFTASQQPHFHRRRGHPPQFQRHWVEALDHQSLA 67
           ++C +   +S T+   +   FS +F KF + +    H R   P  F              
Sbjct: 6   AACAVLCSNSSTSAIRKMSSFSPAFPKFISVEGADIHSRT-KPDGF-------------- 50

Query: 68  FSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEVD 127
              RF++ SYNILA   A+    L+ + P P +KW  R   I   L     D  CLQEVD
Sbjct: 51  ---RFSLVSYNILA--QAYVKSSLFPHSPSPSLKWKLRSDTILAVLKNLGADFFCLQEVD 105

Query: 128 KYLEL-SNILVKAGYTGYYKRRTGDSVDGCAMFWKADKFRLLDGESIQFKDI 178
           ++       +   GY+  Y +R+G   DGC +F+K ++  L+  E I++ D+
Sbjct: 106 EFDSFYKGNMQDLGYSSIYMKRSGQKRDGCGLFYKHNRAELVLEEKIEYNDL 157


>Glyma09g35040.3 
          Length = 306

 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 22/172 (12%)

Query: 9   SSCLIASFSSFTNTANRHDPFSSSF-KFTASQQPHFHRRRGHPPQFQRHWVEALDHQSLA 67
           ++C +   +S T+   +   FS +F KF + +    H R   P  F              
Sbjct: 6   AACAVLCSNSSTSAIRKMSSFSPAFPKFISVEGADIHSRT-KPDGF-------------- 50

Query: 68  FSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEVD 127
              RF++ SYNILA   A+    L+ + P P +KW  R   I   L     D  CLQEVD
Sbjct: 51  ---RFSLVSYNILA--QAYVKSSLFPHSPSPSLKWKLRSDTILAVLKNLGADFFCLQEVD 105

Query: 128 KYLEL-SNILVKAGYTGYYKRRTGDSVDGCAMFWKADKFRLLDGESIQFKDI 178
           ++       +   GY+  Y +R+G   DGC +F+K ++  L+  E I++ D+
Sbjct: 106 EFDSFYKGNMQDLGYSSIYMKRSGQKRDGCGLFYKHNRAELVLEEKIEYNDL 157


>Glyma09g35040.1 
          Length = 390

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 22/172 (12%)

Query: 9   SSCLIASFSSFTNTANRHDPFSSSF-KFTASQQPHFHRRRGHPPQFQRHWVEALDHQSLA 67
           ++C +   +S T+   +   FS +F KF + +    H R   P  F              
Sbjct: 6   AACAVLCSNSSTSAIRKMSSFSPAFPKFISVEGADIHSRT-KPDGF-------------- 50

Query: 68  FSERFTVASYNILADRNAFHHRDLYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEVD 127
              RF++ SYNILA   A+    L+ + P P +KW  R   I   L     D  CLQEVD
Sbjct: 51  ---RFSLVSYNILA--QAYVKSSLFPHSPSPSLKWKLRSDTILAVLKNLGADFFCLQEVD 105

Query: 128 KYLEL-SNILVKAGYTGYYKRRTGDSVDGCAMFWKADKFRLLDGESIQFKDI 178
           ++       +   GY+  Y +R+G   DGC +F+K ++  L+  E I++ D+
Sbjct: 106 EFDSFYKGNMQDLGYSSIYMKRSGQKRDGCGLFYKHNRAELVLEEKIEYNDL 157


>Glyma07g10140.1 
          Length = 70

 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 13/83 (15%)

Query: 91  LYLNVPYPFIKWDRRKTVICHELFGWNPDIICLQEVDKYLELSNILVKAGYTGYYKRRTG 150
           LY N+P+ F++W+R K +I  E+  +N  I+C Q              +G+ G YK RTG
Sbjct: 1   LYSNIPHSFLEWERWKRLILEEINNYNASILCFQ-------------NSGFKGVYKARTG 47

Query: 151 DSVDGCAMFWKADKFRLLDGESI 173
           +++DGCA+FWK + F+LL  E I
Sbjct: 48  EALDGCAVFWKDNLFKLLLQEDI 70


>Glyma17g31100.1 
          Length = 532

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 15/102 (14%)

Query: 105 RKTVICHELFGWNPDIICLQE----------VDKYLELSNILVKAGYTGYYKRRT----G 150
           RK  I  EL  W+ DI+CLQ            D+ +E  ++ V + +       +     
Sbjct: 89  RKRSIIFELGLWSADILCLQTQLQQGEAKAAEDQPME-EHLFVASCFATNTTMESWLIES 147

Query: 151 DSVDGCAMFWKADKFRLLDGESIQFKDIGLRDNVAQLLVFEA 192
           + VDGCA+FW   +F+LL+ + I+F  +GLRDNV QL V E 
Sbjct: 148 NPVDGCAIFWHKSRFKLLNEKCIEFNKLGLRDNVVQLCVLEG 189