Miyakogusa Predicted Gene
- Lj4g3v3060360.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3060360.3 tr|I6M418|I6M418_GOSHI Auxin-responsive protein
OS=Gossypium hirsutum GN=Aux3 PE=2 SV=1,58.95,7e-19,AUX_IAA,AUX/IAA
protein; seg,NULL,CUFF.52230.3
(108 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma09g32570.1 102 6e-23
Glyma05g35640.1 77 3e-15
Glyma08g04070.1 73 8e-14
Glyma13g43310.1 59 1e-09
Glyma15g02040.1 55 2e-08
Glyma15g02040.3 55 2e-08
Glyma15g02040.2 55 2e-08
Glyma15g02040.4 55 2e-08
Glyma01g24100.1 50 5e-07
Glyma08g37070.1 50 7e-07
Glyma01g02350.3 50 7e-07
Glyma01g02350.2 50 7e-07
Glyma01g02350.1 50 7e-07
Glyma04g09550.1 49 1e-06
Glyma09g33630.2 48 2e-06
Glyma09g33630.1 48 2e-06
Glyma09g33630.3 48 2e-06
Glyma06g09650.1 48 3e-06
Glyma02g38260.2 47 6e-06
Glyma02g38260.4 47 7e-06
Glyma02g38260.3 47 7e-06
Glyma02g38260.1 47 7e-06
>Glyma09g32570.1
Length = 307
Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/80 (72%), Positives = 62/80 (77%), Gaps = 5/80 (6%)
Query: 13 GLNLKATELRLGLPGSESPEREG--TNGFSAPL---KGLLSGAKRGFSDAIDGGSGNWVL 67
GLNLKATELRLGLPGSESPERE + PL K L+SGAKRGFSD IDGGSG W+L
Sbjct: 29 GLNLKATELRLGLPGSESPEREEGVEDKNVHPLGMVKCLVSGAKRGFSDTIDGGSGKWLL 88
Query: 68 SGNGGSEMGSGKDGVLFSPR 87
SGN GSE+G GKDG FSPR
Sbjct: 89 SGNSGSEVGLGKDGGFFSPR 108
>Glyma05g35640.1
Length = 287
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
Query: 13 GLNLKATELRLGLPGSESPEREGTNGFSAPLKGLLSGAKRGFSDAIDGGSGNWVLSGNGG 72
GLNLKATELRLGLPG ESPEREG A ++SGAKRGFSDAID NW NGG
Sbjct: 21 GLNLKATELRLGLPGCESPEREG-----AFRSVVVSGAKRGFSDAID---ENW----NGG 68
Query: 73 SEMGSGKDGVLFSPR--XXXXXXXXXXXXXPNCNNQLT 108
SE KD LFSPR +C NQ T
Sbjct: 69 SE----KDAALFSPRGAVSVSAAKSLTLTATDCTNQPT 102
>Glyma08g04070.1
Length = 294
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 52/75 (69%), Gaps = 16/75 (21%)
Query: 13 GLNLKATELRLGLPGSESPEREGTNGFSAPLKGLLSGAKRGFSDAIDGGSGNWVLSGNGG 72
GLNLKATELRLGLPG ESPEREG F + ++SGAKRGFSDAID GNW NGG
Sbjct: 20 GLNLKATELRLGLPGCESPEREGV--FKS---VVVSGAKRGFSDAID---GNW----NGG 67
Query: 73 SEMGSGKD-GVLFSP 86
GS KD LFSP
Sbjct: 68 ---GSEKDAAALFSP 79
>Glyma13g43310.1
Length = 307
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 50/89 (56%), Gaps = 20/89 (22%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNG---FSAPLK-------GLLSGAKRGFSDAI 58
K S+ LNLK TELRLGLPG ESPER+ + F L+ L +GAKRGFSDAI
Sbjct: 21 KNSSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNNVCSLKAGAKRGFSDAI 80
Query: 59 DGGSGNWVLSGNGGSEMGSGKDGVLFSPR 87
D S V G+ G+ LFSPR
Sbjct: 81 DTSS---VTEGSQGA-------SALFSPR 99
>Glyma15g02040.1
Length = 319
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 10 RSAGLNLKATELRLGLPGSESPER-------------EGTNGFSAPLKGLLSGAKRGFSD 56
+++ LNLK TELRLGLPG ESPER + N + + L +GAKRGFSD
Sbjct: 31 KTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSD 90
Query: 57 AIDGGSGNWVLSGNGG 72
+G G + S G
Sbjct: 91 VTEGSQGAALFSPRGA 106
>Glyma15g02040.3
Length = 287
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 10 RSAGLNLKATELRLGLPGSESPER-------------EGTNGFSAPLKGLLSGAKRGFSD 56
+++ LNLK TELRLGLPG ESPER + N + + L +GAKRGFSD
Sbjct: 31 KTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSD 90
Query: 57 AIDGGSGNWVLSGNGG 72
+G G + S G
Sbjct: 91 VTEGSQGAALFSPRGA 106
>Glyma15g02040.2
Length = 287
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 10 RSAGLNLKATELRLGLPGSESPER-------------EGTNGFSAPLKGLLSGAKRGFSD 56
+++ LNLK TELRLGLPG ESPER + N + + L +GAKRGFSD
Sbjct: 31 KTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSD 90
Query: 57 AIDGGSGNWVLSGNGG 72
+G G + S G
Sbjct: 91 VTEGSQGAALFSPRGA 106
>Glyma15g02040.4
Length = 314
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 10 RSAGLNLKATELRLGLPGSESPER-------------EGTNGFSAPLKGLLSGAKRGFSD 56
+++ LNLK TELRLGLPG ESPER + N + + L +GAKRGFSD
Sbjct: 31 KTSSLNLKETELRLGLPGCESPERKSGSALCLFGKELQNNNNVCSVVSPLKAGAKRGFSD 90
Query: 57 AIDGGSGNWVLSGNGG 72
+G G + S G
Sbjct: 91 VTEGSQGAALFSPRGA 106
>Glyma01g24100.1
Length = 315
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 24/74 (32%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ LNLKATELRLGLPGS+SPERE T FS PL K
Sbjct: 30 EKKENLNLKATELRLGLPGSQSPERE-TELFSLSSTKLDEKPLFPLLPTKDGICSLSQKT 88
Query: 46 LLSGAKRGFSDAID 59
++SG KRGF+D +D
Sbjct: 89 VVSGNKRGFADTMD 102
>Glyma08g37070.1
Length = 350
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 22/73 (30%)
Query: 9 KRSAGLNLKATELRLGLPGSESPERE-------GTNGFSAPL---------------KGL 46
++ LNLKATELRLGLPGS+SPER+ T PL K +
Sbjct: 63 EKKENLNLKATELRLGLPGSQSPERDPDLFSLSSTKLDEKPLFSLLPTKDGICSLSQKTV 122
Query: 47 LSGAKRGFSDAID 59
+SG KRGF+D ID
Sbjct: 123 VSGNKRGFADTID 135
>Glyma01g02350.3
Length = 359
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPGS+SPERE + FS PL K
Sbjct: 66 EKKENMNLKATELRLGLPGSQSPERE-PDLFSLSPAKLDEKPLFPLLPTKDGICLSAQKT 124
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 125 VVSGNKRGFADTMDGFS 141
>Glyma01g02350.2
Length = 359
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPGS+SPERE + FS PL K
Sbjct: 66 EKKENMNLKATELRLGLPGSQSPERE-PDLFSLSPAKLDEKPLFPLLPTKDGICLSAQKT 124
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 125 VVSGNKRGFADTMDGFS 141
>Glyma01g02350.1
Length = 359
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 43/77 (55%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPGS+SPERE + FS PL K
Sbjct: 66 EKKENMNLKATELRLGLPGSQSPERE-PDLFSLSPAKLDEKPLFPLLPTKDGICLSAQKT 124
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 125 VVSGNKRGFADTMDGFS 141
>Glyma04g09550.1
Length = 360
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 39/72 (54%), Gaps = 21/72 (29%)
Query: 12 AGLNLKATELRLGLPGSESPEREG---------------------TNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SPER+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPERDSDLCLRSSTQLDEKPLFPLHPLTDDHHSSAKTAVLGN 123
Query: 51 KRGFSDAIDGGS 62
KRGFSDA++G S
Sbjct: 124 KRGFSDAMNGLS 135
>Glyma09g33630.2
Length = 348
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPG +SPERE + FS PL K
Sbjct: 61 EKKENMNLKATELRLGLPGFQSPERE-PDLFSLSSPKLDEKPLFPLLPTKDGICSSGQKA 119
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 120 VVSGNKRGFADTMDGFS 136
>Glyma09g33630.1
Length = 354
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPG +SPERE + FS PL K
Sbjct: 61 EKKENMNLKATELRLGLPGFQSPERE-PDLFSLSSPKLDEKPLFPLLPTKDGICSSGQKA 119
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 120 VVSGNKRGFADTMDGFS 136
>Glyma09g33630.3
Length = 347
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 24/77 (31%)
Query: 9 KRSAGLNLKATELRLGLPGSESPEREGTNGFS--------APL---------------KG 45
++ +NLKATELRLGLPG +SPERE + FS PL K
Sbjct: 61 EKKENMNLKATELRLGLPGFQSPERE-PDLFSLSSPKLDEKPLFPLLPTKDGICSSGQKA 119
Query: 46 LLSGAKRGFSDAIDGGS 62
++SG KRGF+D +DG S
Sbjct: 120 VVSGNKRGFADTMDGFS 136
>Glyma06g09650.1
Length = 339
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 21/72 (29%)
Query: 12 AGLNLKATELRLGLPGSESPEREG---------------------TNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SP+R+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPDRDSDLCLRSSTQFDEKTLFPLRPLTDDHHSSAKTAVLGN 123
Query: 51 KRGFSDAIDGGS 62
KRGFSDA++G S
Sbjct: 124 KRGFSDAMNGFS 135
>Glyma02g38260.2
Length = 297
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 12 AGLNLKATELRLGLPGSESPERE---------------------GTNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SPER+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGN 123
Query: 51 KRGFSDAIDG 60
KRGFSD + G
Sbjct: 124 KRGFSDVMSG 133
>Glyma02g38260.4
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 12 AGLNLKATELRLGLPGSESPERE---------------------GTNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SPER+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGN 123
Query: 51 KRGFSDAIDG 60
KRGFSD + G
Sbjct: 124 KRGFSDVMSG 133
>Glyma02g38260.3
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 12 AGLNLKATELRLGLPGSESPERE---------------------GTNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SPER+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGN 123
Query: 51 KRGFSDAIDG 60
KRGFSD + G
Sbjct: 124 KRGFSDVMSG 133
>Glyma02g38260.1
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 21/70 (30%)
Query: 12 AGLNLKATELRLGLPGSESPERE---------------------GTNGFSAPLKGLLSGA 50
+ LNLKATELRLGLPGS+SPER+ T+ + K + G
Sbjct: 64 SNLNLKATELRLGLPGSQSPERDSDLCLRSSIQFDEKPLFPLHPATDEHHSSSKPAVLGN 123
Query: 51 KRGFSDAIDG 60
KRGFSD + G
Sbjct: 124 KRGFSDVMSG 133