Miyakogusa Predicted Gene

Lj4g3v3017370.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3017370.2 Non Chatacterized Hit- tr|A2WM27|A2WM27_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,27.82,2e-18,Transposase_24,Transposase, Ptta/En/Spm, plant;
coiled-coil,NULL; seg,NULL,CUFF.52154.2
         (382 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g30640.1                                                       329   3e-90
Glyma15g35310.1                                                       134   2e-31
Glyma04g30640.2                                                       128   1e-29
Glyma07g20870.1                                                        66   7e-11
Glyma11g03020.1                                                        57   4e-08
Glyma04g28540.1                                                        54   4e-07
Glyma03g17320.1                                                        51   2e-06

>Glyma04g30640.1 
          Length = 2354

 Score =  329 bits (844), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 153/223 (68%), Positives = 178/223 (79%)

Query: 41   WTVQAIDEHGNQKTIQLTITDVFDMPKGQLIIVPFDRQRRACGQAAALLSGACGRIVLDP 100
            W VQAID+HGN K IQ+T  DVF MP GQ I+VPFD Q RA G AA LLSGACGRIV D 
Sbjct: 2131 WAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVVPFDGQLRAYGDAATLLSGACGRIVTDS 2190

Query: 101  NNVPINFESWKEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNS 160
             NVPINFESW +V   YKD+CFN LK LFHFQ  E  A+RYCLL M RKYRNGK KLW S
Sbjct: 2191 KNVPINFESWTKVPKSYKDNCFNILKTLFHFQASESTARRYCLLTMSRKYRNGKHKLWTS 2250

Query: 161  KYDPSYSRGYLIANVPDGVPKDQWSSFVDYHLKQEYQELCQRNSEARKKQTIPHTGGSKL 220
             +DPS SR  LIA VP G+P+DQW SF+D HLK EYQELC++N+  R+KQT+PHTGG+KL
Sbjct: 2251 AFDPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAVVRQKQTVPHTGGAKL 2310

Query: 221  LSRRQYEMEMELGREVSRGEMYIATHKKSNGSYVNEDARSVGV 263
            LSR+Q+EME+ELGR +SR E+YIAT KK +GS+VNE+ARS+GV
Sbjct: 2311 LSRKQHEMEVELGRPISRVELYIATRKKKDGSFVNEEARSIGV 2353


>Glyma15g35310.1 
          Length = 1053

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 25/204 (12%)

Query: 176  PDGVPKDQWSSFVDYHLKQEYQELCQRNSEARKKQTIPHTGGSKLLSRRQYEMEMELGRE 235
            P GVPK    ++ D   +   +ELC RN E R KQ IPHTGGSK   RR+ E+ +E G+ 
Sbjct: 839  PSGVPK----AYFDNCFETILKELCWRNKEIRSKQVIPHTGGSKANPRRRNELLLETGKL 894

Query: 236  VSRGEMYIATHKKSNGSYVNEDARSVGVLVEQELSQTL-DFSEVSKNDALAKVLGPDHSG 294
             S G++YI THK+ +GS+VNE A+++   +E  L+Q++ D SEVS  D + +VLG +HSG
Sbjct: 895  PSHGQLYIETHKRKDGSFVNEAAKTIAEQIEVGLTQSIVDESEVSPLDVVGRVLGLEHSG 954

Query: 295  CVRGLGVGALHSVAFRST------TTQMKNSISSAESTQLNEELNSLKTKLAASDENIKT 348
             VR +G+G + S  FR+T       +   + ++   S Q  E+ N+L++           
Sbjct: 955  RVRCMGLGVVPSNTFRNTRFRASSLSSSSSGVAFPSSNQWQEKYNNLESAFK-------- 1006

Query: 349  LQTVLFAYMQMKEGHIAANLAALF 372
                  AYM MKEG I   LA+ F
Sbjct: 1007 ------AYMIMKEGRIPEELASYF 1024



 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 7/137 (5%)

Query: 41  WTVQAIDEHGNQKTIQLTITDVFDMPKGQLIIVPFDRQRRACGQAAALLSGACGRIVLDP 100
           WTV+AID     K I++ +  V  +P+   IIV FD Q +A G+A ALL+G  G +  D 
Sbjct: 767 WTVEAIDSEETIKKIKVKVRGVNSLPRELRIIVNFDDQGQAIGEAQALLAGFLGTLAADC 826

Query: 101 NNVPINFESW---KEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRK---YRNGK 154
              P++++ W     V   Y D+CF T+     ++  E+ +K+      G K    R  +
Sbjct: 827 KLFPMDYDRWSGPSGVPKAYFDNCFETILKELCWRNKEIRSKQVIPHTGGSKANPRRRNE 886

Query: 155 LKLWNSKYDPSYSRGYL 171
           L L   K  PS+ + Y+
Sbjct: 887 LLLETGKL-PSHGQLYI 902


>Glyma04g30640.2 
          Length = 164

 Score =  128 bits (321), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 65/86 (75%)

Query: 41  WTVQAIDEHGNQKTIQLTITDVFDMPKGQLIIVPFDRQRRACGQAAALLSGACGRIVLDP 100
           W VQAID+HGN K IQ+T  DVF MP GQ I+VPFD Q RA G AA LLSGACGRIV D 
Sbjct: 79  WAVQAIDQHGNTKEIQVTKADVFLMPPGQHIVVPFDGQLRAYGDAATLLSGACGRIVTDS 138

Query: 101 NNVPINFESWKEVVDPYKDDCFNTLK 126
            NVPINFESW +V   YKD+CFN LK
Sbjct: 139 KNVPINFESWTKVPKSYKDNCFNILK 164


>Glyma07g20870.1 
          Length = 189

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 70/146 (47%), Gaps = 3/146 (2%)

Query: 48  EHGNQKTIQLT-ITDVFDMPKGQLIIVPFDRQRRACGQAAALLSGACGRIVLDPNNVPIN 106
           E G +KTI  T + DV+D P G+ ++V  D      G     L  A G +V      PIN
Sbjct: 44  EGGKKKTIGYTHMLDVWDFPDGEFLLVEVDHWGNPMGWERKTLLNAIGSLVRRHECAPIN 103

Query: 107 FESWKEVVDPYKDDCFNTLKNLFHF-QTLELFAKRYCLLIMGRKYRNGKLKLWNSKYDPS 165
           F SWK++   Y  D    +++ F F   L    K+  +  M  K+R  K +L +  YD S
Sbjct: 104 FLSWKDMPKDYITDMVELIQSKFRFVPELTEQTKKISIDDMSLKWRQFKYELKSKGYDES 163

Query: 166 YSRGYLIANVPD-GVPKDQWSSFVDY 190
            ++  ++A++PD  V   Q+   V Y
Sbjct: 164 KTKEEMVAHIPDPRVDPSQYRDLVHY 189


>Glyma11g03020.1 
          Length = 736

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 95/233 (40%), Gaps = 40/233 (17%)

Query: 101 NNVPINFESWKEVVDPYKDDCFNTLKNLFHFQTLELFAKRYCLLIMGRKYRNGKLKLWNS 160
           + V I  E W  V +  K+  + T+ + +     + F K+  +   G+++R  K +L   
Sbjct: 71  SKVSILHEDWDHVEESEKNMIWQTIMHNYDVPNSK-FLKKKLISYAGQRWRGFKTQL--- 126

Query: 161 KYDPSYSRGYLIANVPDGVP--------KDQWSSFVDYHLKQEYQELCQRNSEARKKQTI 212
                 S  Y+     D  P        KD W  FV+  L   +QE  ++  E +     
Sbjct: 127 ------SSFYIYGKYKDKSPCDKYTFLKKDTWQRFVESRLDPAFQEKRKKAQEVQANNLY 180

Query: 213 PHT---GGSKLLSRRQYEMEMELGREVS----------------RGEMYIATHKKSNGSY 253
           PHT   GG + L     + + +  +E S                R E +    +K +G Y
Sbjct: 181 PHTLSCGGYQKLEENMMQEKAKKVQEASQLDHSLVIVEPPSPLKRHEKWKRARQKKSGDY 240

Query: 254 VNEDARSVGVLVEQELSQTL--DFSEVSKNDALAKVLG-PDHSGCVRGLGVGA 303
           +NE++R +   ++  + Q+    F  + + D L   +G P+H G VRG G G 
Sbjct: 241 INEESRIIAEKIDSLVEQSTQGSFLPLGREDILTVAIGQPEHPGRVRGAGRGV 293


>Glyma04g28540.1 
          Length = 789

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 31/236 (13%)

Query: 101 NNVPINFESWKEVVDPYKDDCFNTLKNLFHF-QTLELFAKRYCLLIMGRKYRNGKLKLWN 159
           + V + +++WKEV    KD  +  ++  F   +  +   K+  L I+G ++R  K  L  
Sbjct: 48  DKVDVTYDTWKEVPTTQKDLIWEDIQAEFEIPEASDGRTKKKMLQIVGERWRQFKFDL-- 105

Query: 160 SKYDPSYSRGYLIANVPDGV----------PKDQWSSFVDYHLKQEYQELCQRNSEARKK 209
                  +R + +A   DGV           K++W+ F        ++++ ++   ++K+
Sbjct: 106 -------TRKWALAADKDGVDDIVCEKYGISKEKWTQFCQTRRDPSWEDVRKKAQASQKQ 158

Query: 210 QTIPHTGGSKLLSRRQYE-MEMELGREVSRGEMYIATHKKSNGSYVNEDA--RSVGVLVE 266
            T PH     +LSR  YE ++ +L  E ++  +  A    S GS ++  +  R    L E
Sbjct: 159 NTAPH-----VLSRGGYEYLDEKLMAEKTKRRLEEAAQSGSTGSIIDPPSPIRRHDSLDE 213

Query: 267 QELSQTLDFSEVSKNDALAKVLG-PDHSGCVRGLGVGALHSVAFRSTTTQMKNSIS 321
           Q  +    F    + D L  V+G P+H   VR +G G      F S +   +  ++
Sbjct: 214 Q--ASQGSFVPHGRQDILTTVIGRPEHPSRVRVVGAGVTIKQYFGSASRTSRKKVT 267


>Glyma03g17320.1 
          Length = 232

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)

Query: 59  ITDVFDMPKGQLIIVPFDRQRRACGQAAALLSGACGRIVLDPNNVPINFESWKEVVDPYK 118
           + D++ MP G+ I V F+R+ +A G+    L+   G I  +P   P+N + W+       
Sbjct: 85  LRDIWTMPPGKTIDVQFNRRNQAIGKEGRKLASFLGIIARNPELAPLNIDDWR------- 137

Query: 119 DDCFNT-LKNLFHFQTLELFAKRYCLLIMGRKYRNGKL-KLWNSKYDPSYSRGYLIANVP 176
             CF+   KN    + ++L  K++ +   G ++    L K W   Y       Y     P
Sbjct: 138 --CFDKEEKN----KLVDLVRKKFSIPERGVEFVKKSLGKKWKD-YKCDLRSMYFTK--P 188

Query: 177 DGVPKDQWSSFVDY 190
           + +P+DQW   V Y
Sbjct: 189 NHIPRDQWIGLVSY 202