Miyakogusa Predicted Gene

Lj4g3v3015100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3015100.1 Non Chatacterized Hit- tr|K4C0W4|K4C0W4_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.82,7e-18,seg,NULL,CUFF.52107.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03200.1                                                       138   4e-33
Glyma05g36380.1                                                       137   6e-33

>Glyma08g03200.1 
          Length = 199

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/217 (47%), Positives = 127/217 (58%), Gaps = 29/217 (13%)

Query: 1   MAGHRLLKRKG-VDEISHDFSDFSLSSPATKIRRLDSASLLPPIVEEDDQPPSFTNDERA 59
           MA  RLLKRKG VDE++    D  L+SPATKIRRLD+   LPPIVEED +P    N+ERA
Sbjct: 1   MALQRLLKRKGGVDELN---DDVPLASPATKIRRLDAE--LPPIVEED-KPLLLPNEERA 54

Query: 60  LVLFKXXXXXXXXXXXXTVDSELLSEIKNQQLPWWTREEER--DLKSN---NHHLAIVPW 114
           LVLFK            T+D +L++ I+N Q   W++E ER  +L+S    N  LA+VPW
Sbjct: 55  LVLFKPLVHSHSSFSL-TLDPDLMNGIRNNQY-LWSKECERVTELESREKENDELALVPW 112

Query: 115 VPQSS---SFSTLDE-DNTNVELMEADDVMXXXXXXXXXXXXXXXXQDTAVGNAPSTSIT 170
           VP  S    FS +D+ DNTN ELMEAD+                   DT +    STS  
Sbjct: 113 VPSPSYHYQFSPVDDSDNTNAELMEADET-------GSMMMDIEQEHDTDIDAKISTSSI 165

Query: 171 NFPTTMN-LPEGFQQQQQHCFLPHLPQSNSTPITWTR 206
           ++PTT   + EGFQQ   HC LP LP + STPITWTR
Sbjct: 166 HYPTTHGGITEGFQQ---HCLLPQLPHNTSTPITWTR 199


>Glyma05g36380.1 
          Length = 206

 Score =  137 bits (346), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/219 (46%), Positives = 130/219 (59%), Gaps = 26/219 (11%)

Query: 1   MAGHRLLKRKG-VDEISHDFSDFSLSSPATKIRRLDSASLLPPIVEEDDQPPSFTNDERA 59
           MA HRLLKRKG VDE++    DF L+SPATKIRRLD+   LPPI+EED+  P   N+ERA
Sbjct: 1   MALHRLLKRKGGVDELN---DDFPLASPATKIRRLDAE--LPPILEEDEPLP---NEERA 52

Query: 60  LVLFKXXXXXXXXXXXXTVDSELLSEIKNQQLPWWTREEER--DLKS----NNHHLAIVP 113
           LVLFK            T+DS+L+  I+N Q   W+++ ER  +L+S    N+  LA+VP
Sbjct: 53  LVLFKPLVHSPSSFSL-TLDSDLMKGIRNNQY-LWSKQCERVTELESREEENDDELALVP 110

Query: 114 WVPQ-SSSFSTLDED-NTNVELMEADDVMXXXXXXXXXXXXXXXXQDTAVGNAP---STS 168
           WVP  S  FS +D+  NTNVELMEAD++                       +     STS
Sbjct: 111 WVPSPSYQFSAVDDSLNTNVELMEADEMGEGEGVGSMMMDIEQEDDTDTDTDTDAKTSTS 170

Query: 169 ITNFPTTMN-LPEGFQQQQQHCFLPHLPQSNSTPITWTR 206
             ++PTT + + EGFQQ   HC LP LP + STPITWTR
Sbjct: 171 SIHYPTTHDGITEGFQQ---HCLLPKLPHNTSTPITWTR 206