Miyakogusa Predicted Gene

Lj4g3v3014330.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3014330.1 tr|I4C326|I4C326_DESTA 30S ribosomal protein S6
OS=Desulfomonile tiedjei (strain ATCC 49306 / DSM
67,32.35,0.00000002,Ribosomal protein S6,Ribosomal protein S6;
Ribosomal_S6,Ribosomal protein S6, plastid/chloroplast; n,CUFF.52054.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g36670.1                                                       314   4e-86
Glyma08g02870.1                                                       310   8e-85

>Glyma05g36670.1 
          Length = 214

 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 157/214 (73%), Positives = 174/214 (81%), Gaps = 5/214 (2%)

Query: 1   MASTSLNSIPLTSSSLNIPHCYXXXXXXXXXXXXRAF----KPLFAESKSHCYQKKNDSV 56
           MAS+SL S+PL+SSSLNIPH               AF    K LFAES+ H + K+ND  
Sbjct: 1   MASSSLTSVPLSSSSLNIPHSSSKASASFVSSPIGAFSRTPKTLFAESRFHFHPKRNDYG 60

Query: 57  FSVKAQTLDFTDSFFEGGLGSEDDLNS-SGTGLTATEEKEEPQCPPGLRQYETMAVLRPD 115
           FS++AQTLDF+DSFFEGG GSED  +S  G G TA EEKEEPQCPPGLRQYETM VLRPD
Sbjct: 61  FSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEKEEPQCPPGLRQYETMMVLRPD 120

Query: 116 MSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYT 175
           MSEDERLALTQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLL+T
Sbjct: 121 MSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFT 180

Query: 176 YFTKPESIVALEETLLADDDVLRSTTFKIKKRKY 209
           YFTKPESI  LEET+L DD+V+RS + KI+KRKY
Sbjct: 181 YFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214


>Glyma08g02870.1 
          Length = 214

 Score =  310 bits (793), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 174/214 (81%), Gaps = 5/214 (2%)

Query: 1   MASTSLNSIPLTSSSLNIPHCYXXXXXXXXXXXXRAF----KPLFAESKSHCYQKKNDSV 56
           MAS+SL S+PL+SSSLNIP                AF    K LFAESKSH Y K+ND  
Sbjct: 1   MASSSLTSVPLSSSSLNIPLSSSKPSSSFLSSPIPAFSRTPKTLFAESKSHFYPKRNDHG 60

Query: 57  FSVKAQTLDFTDSFFEGGLGSEDDLNS-SGTGLTATEEKEEPQCPPGLRQYETMAVLRPD 115
           FS++AQTLDF+DSFFEGG GSEDD +S  G G T  EEKEEPQCPPGLRQYETM VLRPD
Sbjct: 61  FSIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEKEEPQCPPGLRQYETMMVLRPD 120

Query: 116 MSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLYT 175
           MSEDERLALTQKYEE+LVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLL+T
Sbjct: 121 MSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPLAYSIKKKNKAGETNTYLDGIYLLFT 180

Query: 176 YFTKPESIVALEETLLADDDVLRSTTFKIKKRKY 209
           YFTKPESI  LEET+L DD+V+RS + KI+KRKY
Sbjct: 181 YFTKPESITPLEETMLTDDNVIRSMSSKIRKRKY 214