Miyakogusa Predicted Gene

Lj4g3v3014220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3014220.1 Non Chatacterized Hit- tr|E1Z1V9|E1Z1V9_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,57.75,0.000000000000003,seg,NULL,CUFF.52045.1
         (159 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g36760.1                                                       144   5e-35
Glyma08g02800.1                                                       136   1e-32

>Glyma05g36760.1 
          Length = 185

 Score =  144 bits (362), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 77/93 (82%), Gaps = 3/93 (3%)

Query: 46  VIEEDPSSSSADELPIPDQSSYTTKQSGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 105
           +IEE PS S  DELP+   SS  T  SGCKACGREEIE+GCNGEGRIQGGIATVPG GWW
Sbjct: 49  IIEEGPSPS-PDELPVVVDSSEFT--SGCKACGREEIEQGCNGEGRIQGGIATVPGLGWW 105

Query: 106 PIKAYRPCPEFLASGGRYRRQGQSMDEVAFGRG 138
           PIKAYRPCP F+ASGGRYRRQGQSMDEV  G G
Sbjct: 106 PIKAYRPCPAFMASGGRYRRQGQSMDEVVSGSG 138


>Glyma08g02800.1 
          Length = 150

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/102 (69%), Positives = 78/102 (76%), Gaps = 14/102 (13%)

Query: 46  VIEEDPSSSSADELPIPDQSSYTTKQSGCKACGREEIERGCNGEGRIQGGIATVPGFGWW 105
           VIEE PS       P P+ +S      GCKACGREE+E+GCNGEGRIQGGIATVPGFGWW
Sbjct: 47  VIEEGPS-------PSPELTS------GCKACGREEVEQGCNGEGRIQGGIATVPGFGWW 93

Query: 106 PIKAYRPCPEFLASGGRYRRQGQSMDEVAFGRGPTSS-VAGD 146
           PIKAYRPCP F+ASGGRYRRQGQSMDEV  G G T + +A D
Sbjct: 94  PIKAYRPCPAFVASGGRYRRQGQSMDEVVSGSGKTKTPIATD 135