Miyakogusa Predicted Gene
- Lj4g3v3014190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v3014190.1 Non Chatacterized Hit- tr|F6HU30|F6HU30_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52.74,0,ZF_RING_1,Zinc finger, RING-type, conserved site;
seg,NULL; OS12G0209700 PROTEIN,NULL; JUMONJI DOMAI,CUFF.52041.1
(1250 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g02770.1 990 0.0
Glyma05g36780.1 635 0.0
Glyma08g02750.1 313 7e-85
Glyma18g11370.1 202 3e-51
Glyma05g36790.1 134 6e-31
Glyma10g29040.1 87 9e-17
Glyma20g38280.1 86 2e-16
Glyma03g08250.2 52 3e-06
Glyma03g08250.1 52 6e-06
>Glyma08g02770.1
Length = 816
Score = 990 bits (2560), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/872 (63%), Positives = 618/872 (70%), Gaps = 118/872 (13%)
Query: 392 YSYEQVHKKVDDGDGKPEL---------SVEVSQKKIRVTDGQMTSANDSADALLSDNAR 442
++ EQV+ K DDG+ KPEL EV+QKKIR T+ NA+
Sbjct: 45 WNNEQVYIKDDDGNVKPELLDGDDKSELPDEVAQKKIRATE----------------NAQ 88
Query: 443 KKPSLKHPPTQEVVTSDIMNIVKGTNRRLSKELTGTYACDKLAEKKESMAGLRVKKIMKR 502
K P+LK PT +V SDIMNIVKGTNRR SKE T T ACDKL+E K +MAGLRVKKIMKR
Sbjct: 89 KCPALKQSPTNSIVKSDIMNIVKGTNRRHSKERTDTNACDKLSENKGNMAGLRVKKIMKR 148
Query: 503 VSDDGESSLMVQNLRKEIREAVRNKSSIKFEENHFDPKLLEAFRAAITGPKTELVNXXXX 562
VSDDGESSL+VQNLRKEIREAVRNKSSI FE+NHFDPKLLEAFRAAITGPKTELVN
Sbjct: 149 VSDDGESSLVVQNLRKEIREAVRNKSSINFEDNHFDPKLLEAFRAAITGPKTELVNKLSP 208
Query: 563 XXXXXXXXMLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCTRASKPEKIETL 622
MLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRC RA+KPEKIETL
Sbjct: 209 AAIKAKKSMLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCMRATKPEKIETL 268
Query: 623 KSVLDLLRGSSENLESKQTSEFEAKNSILSRLYLADTSVFPRKEDVKPLSVHTTIASSDQ 682
KSVLDLLR S N ESKQ SE +AKN ILSRLYLADTSVFPRK+DVKPLSV TIA+S+Q
Sbjct: 269 KSVLDLLRKGSNNPESKQASECQAKNPILSRLYLADTSVFPRKKDVKPLSVLKTIANSEQ 328
Query: 683 TKQNNPPGKGSNLSLDNNSVKTTEVNNLVLKAKVCSSGKKVDKKILHGLVGDKLASGKV- 741
TK +P K S VCSS KKVDKK++ G VGD SGKV
Sbjct: 329 TKH-SPSEKNS----------------------VCSSEKKVDKKLVRGPVGDNSTSGKVR 365
Query: 742 --SRSEGTLISSSTGAKVDTKESGLKSDSMKGDKRKWALEVLARKTAAASRNTANESQED 799
+ SE T +SS+ GAK TKE LKS MK DKRKWALEVLARKTAA S NTAN +QED
Sbjct: 366 SDNHSERTSVSSA-GAKTSTKELDLKSGCMKSDKRKWALEVLARKTAATSGNTANGNQED 424
Query: 800 NAMFKG-YPLLAQLPADMRPVLEACRHNKIPISVRQTQXXXXXXXXXXXXXXPVMCRSAD 858
NA+FKG YP+LAQLP DMRPVL C HNKIPISVRQTQ V+ R+AD
Sbjct: 425 NAVFKGNYPVLAQLPIDMRPVLAPCHHNKIPISVRQTQLYRLTERILRNTNLAVIRRTAD 484
Query: 859 TELAVADAINIEKGVADRSNSKLVYLNLCSQELLHCKNNTKLTATTDANPPASSPVHTD- 917
TELAVADAINIEK VADRSNSKLVYLNLCSQELLH NNTK TD +PPASS + TD
Sbjct: 485 TELAVADAINIEKEVADRSNSKLVYLNLCSQELLHHTNNTKTNVATDTSPPASSSMLTDQ 544
Query: 918 QSEPSTDDLLTDPEVQIALKNAGLLGDSPPGSPCKDKETCNEDGVSGPENILELDSHPEL 977
QSE +TDDL TDPEV+ ALKNAGLL DSPP SP +++ETCN D +SGP+NILE DSHP+L
Sbjct: 545 QSELNTDDLSTDPEVETALKNAGLLSDSPPSSPHENRETCNGD-MSGPDNILEPDSHPDL 603
Query: 978 DIYGDFEYDLEDEDFIGSSVSKVSNLKQEQSESKVKLVFSTMNFKNTDNVLDCTDCERSE 1037
DIYGDFEYDLEDED+IG+SV+KVS KQEQ++ + T+ +R+
Sbjct: 604 DIYGDFEYDLEDEDYIGASVTKVSFPKQEQNDQISLWIVQTVRVLR----------DRA- 652
Query: 1038 NKEVPGDAPCSPKCSNDAVHSESTNEAGIGQRSVSSEQLLCKGDVEPADSEFEELYGPDK 1097
ST +A GQ SVSS L C+G VEP DSEFEELYGPDK
Sbjct: 653 ----------------------STIDAETGQPSVSSVLLSCEGAVEPPDSEFEELYGPDK 690
Query: 1098 EPLIKKFPDVESRSLCGEGKTDTLTEANYCHNDEKHVLDKTVNASKLSNDKSATVSETGE 1157
EPLIKK P ESRSL G+GKT+TL+ AN CHNDEKHVLD VNAS+L N+
Sbjct: 691 EPLIKKNPVGESRSLHGDGKTETLSVANDCHNDEKHVLDNAVNASELGNE---------- 740
Query: 1158 KIRKEEEKSDIAAKQSDSVNHVARKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVM 1217
++ KVEAYIKEHIRPLCKSGVITA+QYRWAVAKTTEKVM
Sbjct: 741 --------------------NLTEKVEAYIKEHIRPLCKSGVITADQYRWAVAKTTEKVM 780
Query: 1218 KYHSKSKNANFLIKEGEKVKKLAEEYVEAAQQ 1249
KYHS+SK+ANFLIKEGEKVKKLAE+YVEAAQQ
Sbjct: 781 KYHSRSKSANFLIKEGEKVKKLAEQYVEAAQQ 812
>Glyma05g36780.1
Length = 812
Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/496 (68%), Positives = 374/496 (75%), Gaps = 46/496 (9%)
Query: 771 GDKRKWALEVLARKTAAASRNTANESQEDNAMFKG-YPLLAQLPADMRPVLEACRHNKIP 829
DKRKWALEVLARKTAA SRNTAN +QEDNA+FKG YPLLAQLP DMRPVL CRHNKIP
Sbjct: 342 SDKRKWALEVLARKTAATSRNTANGNQEDNAVFKGNYPLLAQLPIDMRPVLAPCRHNKIP 401
Query: 830 ISVRQTQXXXXXXXXXXXXXXPVMCRSADTELAVADAINIEKGVADRSNSKLVYLNLCSQ 889
ISVRQ Q V+ R+ADTELAVADA+NIEK VADRSNSKLVYLNL SQ
Sbjct: 402 ISVRQAQLYRLTERLLRNTNLAVIRRTADTELAVADAVNIEKEVADRSNSKLVYLNLSSQ 461
Query: 890 ELLHCKNNTKLTATTDANPPASSPVHTDQ-SEPSTDDLLTDPEVQIALKNAGLLGDSPPG 948
ELLH NNTK TD +PPASS + TDQ SE +TDDL TDPEV+ ALKNAGLL DSPP
Sbjct: 462 ELLHRTNNTKTNVATDTSPPASSAMLTDQQSELNTDDLSTDPEVETALKNAGLLSDSPPS 521
Query: 949 SPCKDKETCNEDGVSGPENILELDSHPELDIYGDFEYDLEDEDFIGSSVSKVSNLKQEQS 1008
SP + +ETCN D +SGP+NILELDSHP+LDIYGDFEYDLEDED+IG+SV+KVSN KQEQ+
Sbjct: 522 SPHESRETCNSD-MSGPDNILELDSHPDLDIYGDFEYDLEDEDYIGASVTKVSNPKQEQN 580
Query: 1009 ESKVKLVFSTMNFKNTDNVLDCTDCERSENKEVPGDAPCSPKCSNDAVHSE--STNEAGI 1066
ESKVKLVFSTMN K +D LDC D E SE EVPGDA CSP C NDAV + ST + +
Sbjct: 581 ESKVKLVFSTMNLKKSDIALDCADWEGSERIEVPGDASCSPNCHNDAVLRDRASTIDEEM 640
Query: 1067 GQRSVSSEQLLCKGDVEPADSEFEELYGPDKEPLIKKFPDVESRSLCGEGKTDTLTEANY 1126
GQ SVSSE L C+ VEP DSEFEELYGPDKEPLIKKFP
Sbjct: 641 GQPSVSSELLPCEAAVEPPDSEFEELYGPDKEPLIKKFP--------------------- 679
Query: 1127 CHNDEKHVLDKTVNASKLSN-------------DKSATVSETGEKIRKEEEKSDIAAKQS 1173
VLD VNAS+L N DKS+ VSE GE +K+EEKS++ AKQ+
Sbjct: 680 -------VLDDAVNASELENENLTEKVSVTTITDKSSNVSEGGENSQKKEEKSNVIAKQT 732
Query: 1174 DSVNHVARKVEAYIKEHIRPLCKSGVITAEQYRWAVAKTTEKVMKYHSKSKNANFLIKEG 1233
DSVNHV ++VEAYIKEHIRPLCKSGVITA+QY+WAVAKTTEKVMKYHSK+KNANFLIKEG
Sbjct: 733 DSVNHVTKRVEAYIKEHIRPLCKSGVITADQYKWAVAKTTEKVMKYHSKAKNANFLIKEG 792
Query: 1234 EKVKKLAEEYVEAAQQ 1249
EKVKKLAE+Y EAAQQ
Sbjct: 793 EKVKKLAEQYAEAAQQ 808
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/319 (70%), Positives = 246/319 (77%), Gaps = 25/319 (7%)
Query: 395 EQVHKKVDDGD---------GKPELSVEVSQKKIRVTDGQMTSANDSADALLSDNARKKP 445
EQV+ K DDGD KPEL E+ QKKIR T+ NA+K P
Sbjct: 38 EQVYIKADDGDVKPELPEEDDKPELPDEIGQKKIRATE----------------NAQKCP 81
Query: 446 SLKHPPTQEVVTSDIMNIVKGTNRRLSKELTGTYACDKLAEKKESMAGLRVKKIMKRVSD 505
+LKH PT+ +V S+IMNIVKGTNRR SK T T ACDKL+E K +MAGLRVKKIMKRVSD
Sbjct: 82 ALKHSPTKAIVKSNIMNIVKGTNRRQSKGRTDTNACDKLSENKGNMAGLRVKKIMKRVSD 141
Query: 506 DGESSLMVQNLRKEIREAVRNKSSIKFEENHFDPKLLEAFRAAITGPKTELVNXXXXXXX 565
DGESSL+VQNLR+EIREAVRNKSSI FE+NHFDPKLLEAFRAAITGPKTELVN
Sbjct: 142 DGESSLVVQNLRQEIREAVRNKSSINFEDNHFDPKLLEAFRAAITGPKTELVNKLSPAAI 201
Query: 566 XXXXXMLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCTRASKPEKIETLKSV 625
MLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRC RA+KPEKIETLKSV
Sbjct: 202 KAKKSMLQKGKVRENLTKKIFGTSNGRRKRAWDRDCEIEFWKYRCMRATKPEKIETLKSV 261
Query: 626 LDLLRGSSENLESKQTSEFEAKNSILSRLYLADTSVFPRKEDVKPLSVHTTIASSDQTKQ 685
LDLLR S++ ESKQ SE +AKN ILSRLYLADTSVFPRKEDVKPLSV TIA+S+QTK
Sbjct: 262 LDLLRKGSDSPESKQASECQAKNPILSRLYLADTSVFPRKEDVKPLSVLKTIANSEQTKH 321
Query: 686 NNPPGKGSNLSLDNNSVKT 704
NNP K NL +DNN+ T
Sbjct: 322 NNPSDKAPNLFVDNNTKAT 340
>Glyma08g02750.1
Length = 177
Score = 313 bits (803), Expect = 7e-85, Method: Composition-based stats.
Identities = 136/153 (88%), Positives = 144/153 (94%)
Query: 30 VEAERCGICMDTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTI 89
VE ERCGICMD V+DRG+LDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTI
Sbjct: 5 VEGERCGICMDMVIDRGLLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTI 64
Query: 90 GSNKVEDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKIRNELSTIEGDSDL 149
G+NKVEDDS + +DDWSIE NNTLSFPSYYIDENAVICLDGDGCK+RN L+TIEGDSDL
Sbjct: 65 GNNKVEDDSFFRDDDWSIEEKNNTLSFPSYYIDENAVICLDGDGCKVRNGLATIEGDSDL 124
Query: 150 DTSIACDLCDRWYHAFCVGFDTEGTSESTWLCP 182
DTSIACD CD WYHAFCVGFDTEGTS+STWLCP
Sbjct: 125 DTSIACDSCDIWYHAFCVGFDTEGTSDSTWLCP 157
>Glyma18g11370.1
Length = 106
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/104 (89%), Positives = 98/104 (94%)
Query: 53 HWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGSNKVEDDSLYGEDDWSIEGTNN 112
H FCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIG+NKVEDDS + +DDWSIE NN
Sbjct: 1 HRFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGNNKVEDDSFFKDDDWSIEEKNN 60
Query: 113 TLSFPSYYIDENAVICLDGDGCKIRNELSTIEGDSDLDTSIACD 156
TLSFPSYYIDENAVICLDGDGCK+RN L+TIEGDSDLDTSIACD
Sbjct: 61 TLSFPSYYIDENAVICLDGDGCKVRNGLATIEGDSDLDTSIACD 104
>Glyma05g36790.1
Length = 103
Score = 134 bits (338), Expect = 6e-31, Method: Composition-based stats.
Identities = 70/140 (50%), Positives = 74/140 (52%), Gaps = 65/140 (46%)
Query: 42 VVDRGVLDCCQHW-------------------------FCFVCIDNWATITNLCPLCQNE 76
V+DRG+LDCCQHW FCFVCIDNWATITNLCPLCQNE
Sbjct: 2 VIDRGLLDCCQHWGSYAKKWCCNVKIFMDYTILVKALRFCFVCIDNWATITNLCPLCQNE 61
Query: 77 FQLITCVPVYDTIGSNKVEDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKI 136
FQLITCVP AVICLDGDGCK+
Sbjct: 62 FQLITCVP----------------------------------------AVICLDGDGCKV 81
Query: 137 RNELSTIEGDSDLDTSIACD 156
RN L+TIEGDSDLDTSIACD
Sbjct: 82 RNGLATIEGDSDLDTSIACD 101
>Glyma10g29040.1
Length = 759
Score = 87.4 bits (215), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 35 CGICM---DTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGS 91
CGIC+ D RGVL+CC H+FCF CI WA + + CPLC+ F+ I+ P T G
Sbjct: 394 CGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVESRCPLCKQRFKTIS-KPARSTTGI 452
Query: 92 NKVEDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKIRNELSTIEGDSDLDT 151
+ E E D + + L SY V+C S D
Sbjct: 453 DLREVVIQVPERDQVYQPSEEELR--SYIDPYEYVMC------------SECHQGGDDGL 498
Query: 152 SIACDLCDRWYHAFCVGFDTEGTSESTWLCPRCTADEVSKGTDTNSTE------RATVEF 205
+ CD+CD H +CVG E E W C C V+ G+ ++ + R +V+
Sbjct: 499 MLLCDICDSPAHTYCVGLGRE-VPEGNWYCDGCRP--VALGSSSSQVQEGVADPRVSVQS 555
Query: 206 NPDNSKGECHAEDSF 220
+P H +S
Sbjct: 556 HPIRPPPALHVRESI 570
>Glyma20g38280.1
Length = 794
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 82/195 (42%), Gaps = 27/195 (13%)
Query: 35 CGICM---DTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVYDTIGS 91
CGIC+ D RGVL+CC H+FCF CI WA + + CPLC+ F+ I+ P T G
Sbjct: 343 CGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVESRCPLCKQRFKAIS-KPARSTTGI 401
Query: 92 NKVEDDSLYGEDDWSIEGTNNTLSFPSYYIDENAVICLDGDGCKIRNELSTIEGDSDLDT 151
+ E E D + + L SY VIC S D
Sbjct: 402 DLREVVIQVPERDQVYQPSEEELR--SYIDPYEYVIC------------SECHQGGDDGL 447
Query: 152 SIACDLCDRWYHAFCVGFDTEGTSESTWLCPRCTADEVSKGTDTNSTE------RATVEF 205
+ CD+CD H +CVG E E W C C V+ G+ ++ + R +V+
Sbjct: 448 MLLCDICDSPAHTYCVGLGRE-VPEGNWYCDGCRP--VALGSSSSQVQEGVADPRVSVQS 504
Query: 206 NPDNSKGECHAEDSF 220
+P H +S
Sbjct: 505 HPVRPPPVLHVRESI 519
>Glyma03g08250.2
Length = 215
Score = 52.4 bits (124), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 28 VDVE-AERCGICMDTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVY 86
+D+E E CGICM+ + ++ VL C H C C NW + CP C++ Q + ++
Sbjct: 102 IDIEREEECGICME-MNNKVVLPNCNHSLCMKCYRNWHARSQSCPFCRDTLQRVNSGDLW 160
Query: 87 DTIGSNKVED 96
+ SN+++D
Sbjct: 161 IYMNSNEIDD 170
>Glyma03g08250.1
Length = 251
Score = 51.6 bits (122), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 28 VDVE-AERCGICMDTVVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQNEFQLITCVPVY 86
+D+E E CGICM+ + ++ VL C H C C NW + CP C++ Q + ++
Sbjct: 138 IDIEREEECGICME-MNNKVVLPNCNHSLCMKCYRNWHARSQSCPFCRDTLQRVNSGDLW 196
Query: 87 DTIGSNKVED 96
+ SN+++D
Sbjct: 197 IYMNSNEIDD 206