Miyakogusa Predicted Gene

Lj4g3v3002780.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v3002780.1 Non Chatacterized Hit- tr|C6SW29|C6SW29_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,30.95,0.18,seg,NULL,CUFF.52011.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g02590.1                                                       204   4e-53

>Glyma08g02590.1 
          Length = 200

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 105/144 (72%), Positives = 122/144 (84%), Gaps = 6/144 (4%)

Query: 8   KPTTTIEVCQPKSQHSSFGQKLSEITSKAFKGHHARHGSNQNQIQHFSQTQVESHGNSGS 67
           KP T IEVCQPK+QHSSFGQKLSEITSKAFKG   RHGSNQNQ+Q++SQTQVES G++G+
Sbjct: 23  KPNTAIEVCQPKTQHSSFGQKLSEITSKAFKG---RHGSNQNQLQYYSQTQVESQGHNGT 79

Query: 68  KTETH--GQTQTQRDRKHGVTKTEITVCVVQAQITQTKEDPPSPRGTTTKCFGPHARKIG 125
           KTE H  GQTQTQ D+KHGV+KT+ITV VVQAQIT T++  P P  TTT CFG HA+K G
Sbjct: 80  KTEAHYYGQTQTQNDKKHGVSKTQITVTVVQAQITHTEKKDPYPYDTTTTCFGAHAKKNG 139

Query: 126 EV-NNKKETNIFRRIKNGMSRHNN 148
           E+ NNKK+ N+FRRIKNG+SRHNN
Sbjct: 140 ELNNNKKDMNLFRRIKNGLSRHNN 163