Miyakogusa Predicted Gene

Lj4g3v2950000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2950000.1 Non Chatacterized Hit- tr|Q84VD8|Q84VD8_ORYSJ
Putative myosin OS=Oryza sativa subsp. japonica PE=2
S,39.58,5e-19,NT-C2,EEIG1/EHBP1 N-terminal domain; seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.52077.1
         (242 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g01610.1                                                       370   e-103
Glyma05g37980.1                                                       350   5e-97
Glyma11g02730.1                                                       276   2e-74
Glyma01g42710.1                                                       270   8e-73
Glyma20g29760.1                                                       144   9e-35
Glyma10g38060.1                                                       122   3e-28
Glyma04g12100.1                                                       118   5e-27
Glyma16g31310.1                                                       110   1e-24
Glyma06g11220.1                                                       110   1e-24
Glyma09g25810.1                                                       110   1e-24
Glyma13g21080.1                                                        60   2e-09
Glyma10g07200.1                                                        52   8e-07

>Glyma08g01610.1 
          Length = 1086

 Score =  370 bits (949), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 181/242 (74%), Positives = 200/242 (82%), Gaps = 1/242 (0%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MFRWR++++RVKAVFKLHFHVTQ++Q GVD+LVLSIVPGDI KVTTRLEKA VRGGVCRW
Sbjct: 1   MFRWRSERHRVKAVFKLHFHVTQMVQSGVDALVLSIVPGDIAKVTTRLEKAAVRGGVCRW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           +NP YETVKF+Q+PKTGKFSER+YYFVVSTGLSK SSFGEVSVDFA YADATK S+VSLP
Sbjct: 61  DNPAYETVKFVQEPKTGKFSERLYYFVVSTGLSKASSFGEVSVDFAEYADATKPSTVSLP 120

Query: 121 IKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSSE 180
           IKNSH DAVLHVSIQRLQ+NND REEE+ EDAKLKP+DRSLRTYLSNG+ID  SKSDSSE
Sbjct: 121 IKNSHCDAVLHVSIQRLQENNDKREEEDSEDAKLKPNDRSLRTYLSNGEIDANSKSDSSE 180

Query: 181 DVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNANGFLSD 240
           DVSAK +TN   LSAD RT                  DTPRE  L+N  I PN NGF SD
Sbjct: 181 DVSAKANTNGAALSADCRTSSGSDITLSSSDGSSGL-DTPRENGLRNGGIHPNNNGFPSD 239

Query: 241 MS 242
           +S
Sbjct: 240 VS 241


>Glyma05g37980.1 
          Length = 1086

 Score =  350 bits (899), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 173/242 (71%), Positives = 196/242 (80%), Gaps = 1/242 (0%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MFRW+++++RVKAVFKLHFHVTQ++Q  VD LVLSIVPGDIGKVTTRLEKA VRGGVCRW
Sbjct: 1   MFRWKSERHRVKAVFKLHFHVTQMVQSAVDGLVLSIVPGDIGKVTTRLEKAAVRGGVCRW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           ENPVYETVKF+++PK GKF+ER+Y+FVVSTGLSK SSFGEVSVDFA YA+ATK S+VSLP
Sbjct: 61  ENPVYETVKFVREPKIGKFNERLYHFVVSTGLSKASSFGEVSVDFAEYAEATKPSTVSLP 120

Query: 121 IKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSSE 180
           IKNSH DAVLHVSIQRLQ+NND REEE+CEDAKLK +DRSLRTYLSNG+ID  SK DSSE
Sbjct: 121 IKNSHCDAVLHVSIQRLQENNDKREEEDCEDAKLKANDRSLRTYLSNGEIDANSKIDSSE 180

Query: 181 DVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNANGFLSD 240
           DVSAK +TN   LSAD RT                  DT RE  L+N  I  N +GFLS+
Sbjct: 181 DVSAKANTNGAALSADCRTSSGSDITLSSSDGSSGL-DTLRENGLRNGGIHHNDHGFLSE 239

Query: 241 MS 242
            S
Sbjct: 240 AS 241


>Glyma11g02730.1 
          Length = 1032

 Score =  276 bits (705), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 139/202 (68%), Positives = 160/202 (79%), Gaps = 8/202 (3%)

Query: 1   MFR---WRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGV 57
           MFR   WR+DKNRVKAVFKLHFH TQV Q G+D+LVLSIVPGDIGK TT+LEK  VR G 
Sbjct: 1   MFRSARWRSDKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKTTVRDGT 60

Query: 58  CRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSV 117
           CRWENPVYETVKFIQ+PKTGK S++VY+F+VSTGL K SS GEVS++FA Y +ATK SSV
Sbjct: 61  CRWENPVYETVKFIQEPKTGKISDKVYHFLVSTGLPKASSIGEVSINFADYVEATKPSSV 120

Query: 118 SLPIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSD 177
           +LPI+ SH DAVLHVSIQRLQ+N D REE+ECEDA LK +DRS     S       S+S 
Sbjct: 121 ALPIRISHCDAVLHVSIQRLQENGDRREEDECEDAILKSNDRS-----SRNQSSETSRSC 175

Query: 178 SSEDVSAKESTNRVELSADRRT 199
           SSEDVS+K   NR ELS++ RT
Sbjct: 176 SSEDVSSKAIINRAELSSNYRT 197


>Glyma01g42710.1 
          Length = 1074

 Score =  270 bits (691), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 145/243 (59%), Positives = 170/243 (69%), Gaps = 20/243 (8%)

Query: 1   MFR---WRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGV 57
           MFR   WR++KNRVKAVFKLHFH TQV Q G+D+LVLSIVPGDIGK TT+LEKA VR   
Sbjct: 1   MFRSARWRSEKNRVKAVFKLHFHATQVFQSGMDALVLSIVPGDIGKPTTKLEKATVRDRT 60

Query: 58  CRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSV 117
           CRWENPVYETVKFIQ+PKTGK ++++Y+F+VSTGL K SS GEVS++FA Y +ATK SSV
Sbjct: 61  CRWENPVYETVKFIQEPKTGKINDKIYHFLVSTGLPKASSIGEVSMNFADYVEATKPSSV 120

Query: 118 SLPIKNSHSDAVLHVSIQRLQDNNDTREEEECEDAKLKPHDRSLRTYLSNGDIDGLSKSD 177
           +LPI+ SH DAVLHVSIQRLQ+N D REEEECED KLK  DRS R  LSNG+ D  S+S 
Sbjct: 121 ALPIRISHCDAVLHVSIQRLQENGDRREEEECEDVKLKSDDRSSRNQLSNGNTDETSRSC 180

Query: 178 SSEDVSAKESTNRVELSADRRTXXXXXXXXXXXXXXXFGLDTPRELALQNTSILPNANGF 237
           SSEDV++  S                            G DTPRE+  +  +I  N   F
Sbjct: 181 SSEDVTSSGS-----------------DMTLSSSDDSSGFDTPREIGPRKKNIHLNTKRF 223

Query: 238 LSD 240
           L D
Sbjct: 224 LPD 226


>Glyma20g29760.1 
          Length = 846

 Score =  144 bits (363), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 94/131 (71%)

Query: 1   MFRWRNDKNRVKAVFKLHFHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRW 60
           MF+  + KN++KA+FKL F  TQV +   +++++S+VP D+GK T +LEK  V+ G C W
Sbjct: 1   MFKSWSKKNKIKALFKLDFQATQVPKMKKNAIMVSLVPDDVGKPTVKLEKTAVQDGTCSW 60

Query: 61  ENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLP 120
           ENPV+E+VK ++D K+GK  E++Y+F+VSTG SK    GE S+DFA +   T+  ++SLP
Sbjct: 61  ENPVFESVKLVRDSKSGKIHEKIYHFIVSTGSSKSGFLGEASIDFADFVAETEPMTISLP 120

Query: 121 IKNSHSDAVLH 131
           +K ++S  VLH
Sbjct: 121 LKFANSGIVLH 131


>Glyma10g38060.1 
          Length = 878

 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 52/106 (49%), Positives = 77/106 (72%)

Query: 33  VLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGL 92
           ++S+VP D+GK T +LEK  V+ G C WENPV+E VK ++D K+GK  E++Y+F+VSTG 
Sbjct: 1   MVSLVPDDVGKPTVKLEKTAVQDGTCSWENPVFEPVKLVRDSKSGKVHEKIYHFIVSTGS 60

Query: 93  SKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHVSIQRLQ 138
           SK    GE S+DFA +   T+  ++SLP+K ++S  VLHV+IQ ++
Sbjct: 61  SKSGFLGEASIDFADFVAETEPMTISLPLKFANSGIVLHVTIQNVE 106


>Glyma04g12100.1 
          Length = 1835

 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 96/167 (57%), Gaps = 5/167 (2%)

Query: 26  QPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYY 85
           Q G D L +S +P D GK T++  KA VR G C+W +P+YET + +QD KT ++ E+ Y 
Sbjct: 4   QSGWDKLFISFIPADSGKATSKTTKANVRNGTCKWADPIYETTRLLQDIKTRQYEEKFYK 63

Query: 86  FVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHVSIQRLQDNNDTRE 145
           FVV+ G S+ S  GE +++ A + DA K ++V+LP+  S     LHV++Q L      RE
Sbjct: 64  FVVAMGSSRSSILGEANINLADFVDALKPTAVALPLNGSEPGVALHVTVQLLTSKTGFRE 123

Query: 146 EEECEDAKLKPHDRSLRTYLSNGDIDGLSKS-DSSEDVSAKESTNRV 191
            E+  + +    +R L+T    G  D  + S +SS D +A    N+V
Sbjct: 124 FEQQRELR----ERGLQTTSDQGTHDESADSKESSPDQNANNHMNKV 166


>Glyma16g31310.1 
          Length = 823

 Score =  110 bits (276), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/116 (46%), Positives = 82/116 (70%), Gaps = 2/116 (1%)

Query: 19  FHVTQVLQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGK 78
           FH    ++  V  L++++VP ++GK T +LEK  V+ G C WENP++E+VK ++D K+GK
Sbjct: 8   FHQVPNMKKSV--LMVALVPDNVGKPTVKLEKVAVQDGTCLWENPIFESVKLVKDTKSGK 65

Query: 79  FSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHVSI 134
             E++Y+FVVSTG SK    GE S+DFA +A  T+  +VSLP+K ++S A+LHV +
Sbjct: 66  LQEKIYHFVVSTGSSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHVGV 121


>Glyma06g11220.1 
          Length = 2074

 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 93/168 (55%), Gaps = 6/168 (3%)

Query: 26  QPGVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYY 85
           Q G D L +S +P D  K T++  KA VR G C+W +P+YET + +QD KT ++ E+ Y 
Sbjct: 4   QSGWDKLFISFIPADSVKATSKTTKANVRNGTCKWADPIYETTRLLQDIKTRQYEEKFYK 63

Query: 86  FVVSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHVSIQRLQDNNDTRE 145
           FVV  G S+ S  GE +++ A + DA K ++V+LP+  S     LHV++Q L      RE
Sbjct: 64  FVVGMGSSRSSILGEANINLADFVDALKPTAVALPLNGSEPGVTLHVTVQLLTSKTGFRE 123

Query: 146 EEECEDAKLKPHDRSLRTYLSNGDIDGLSKSDSSEDVSAKESTNRVEL 193
            E+  + +    +R L+T    G  D    +DS E    +   +RV+L
Sbjct: 124 FEQQRELR----ERGLQTTSDKGTHD--ESADSKESSPDQNVHSRVKL 165


>Glyma09g25810.1 
          Length = 792

 Score =  110 bits (275), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 51/101 (50%), Positives = 75/101 (74%)

Query: 32  LVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYYFVVSTG 91
           L++++VP D+GK T +LEK  V+ G C WENP++E+VK  +D K+GK  E++Y+F+VSTG
Sbjct: 6   LMVALVPDDVGKPTVKLEKVAVQDGTCLWENPIFESVKLAKDTKSGKLQEKIYHFIVSTG 65

Query: 92  LSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLHV 132
            SK    GE S+DFA +A  T+  +VSLP+K ++S A+LHV
Sbjct: 66  SSKSGFLGESSIDFADFAAETEPLTVSLPLKFANSGAILHV 106


>Glyma13g21080.1 
          Length = 1055

 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 6/134 (4%)

Query: 1   MFRWRNDKNRV-KAVFKLHFHVTQV--LQPGVDSLVLSIVPGDIGKVTTRLEKALVRGGV 57
           MFR    K+R+ K+  K+ F ++ +  LQ G D L +S+V  + GK   +  K  VR G 
Sbjct: 1   MFRLH--KHRIAKSGDKIEFRISHLKALQ-GWDKLFVSVVSVETGKTIAKSSKVSVRNGG 57

Query: 58  CRWENPVYETVKFIQDPKTGKFSERVYYFVVSTGLSKGSSFGEVSVDFASYADATKLSSV 117
           C+W +   E++   +D  + +  + V   +V+ G S+    GE +V   SY  +     +
Sbjct: 58  CQWSDTFSESILVSRDNSSKEIDDYVLKLIVAMGSSRSGILGEATVSLTSYRSSGAAIPL 117

Query: 118 SLPIKNSHSDAVLH 131
           S+P+   +   VLH
Sbjct: 118 SIPLNKCNHGTVLH 131


>Glyma10g07200.1 
          Length = 104

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 49/104 (47%)

Query: 28  GVDSLVLSIVPGDIGKVTTRLEKALVRGGVCRWENPVYETVKFIQDPKTGKFSERVYYFV 87
           G D L +S+V  + GK   +  K  VR G C+W +   E++   +D  + +  +     +
Sbjct: 1   GWDKLFVSVVSVENGKTIAKSSKVSVRNGGCQWSDNFSESISISRDNSSKEIDDCDLKLI 60

Query: 88  VSTGLSKGSSFGEVSVDFASYADATKLSSVSLPIKNSHSDAVLH 131
           V+ G S+    GE +V   SY  +     +S+P+   +   VLH
Sbjct: 61  VAMGSSRSGILGEATVSLTSYMSSGAAIPLSIPLNKCNHGTVLH 104