Miyakogusa Predicted Gene

Lj4g3v2894410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2894410.1 Non Chatacterized Hit- tr|I3T9X1|I3T9X1_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,52.99,4e-19,coiled-coil,NULL; DUF761,Protein of unknown function
DUF761, plant; PROKAR_LIPOPROTEIN,NULL,CUFF.51844.1
         (207 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g38240.1                                                       216   2e-56

>Glyma05g38240.1 
          Length = 206

 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 13/213 (6%)

Query: 1   MDPTQIKKIQAMNRYKRRQVLDNLYFYSFTALACSVFCCVTLCLPYLASMVQVFFMVYMS 60
           MDPTQ+KKIQAMNRYK+RQ LDNLYFY  +AL CSVFCCVTLC PYL S+++VFFMV++S
Sbjct: 1   MDPTQMKKIQAMNRYKKRQFLDNLYFYFLSALTCSVFCCVTLCFPYLCSLLRVFFMVHIS 60

Query: 61  SLIQFMLSSKLVFFIGNLIIFVLVVNSRMF-SSDPSSTSDVYYDEYIQSSQTHMPQINPT 119
           SLI  +LSSKL+F IGNLIIF L+VNSR+  S   SST  VYYDEYIQS QT  PQI P+
Sbjct: 61  SLIPLLLSSKLLFIIGNLIIFFLLVNSRILSSDSSSSTCVVYYDEYIQSCQTMKPQI-PS 119

Query: 120 FVVNKAKSFENKHVVESVAMAVEDGLNNLDLKARVWVNKA----KEEDNSDGEEEQSF-H 174
             VN++K+   KHV E+      + +N++D K +  + KA    KEE+N DG  +QS   
Sbjct: 120 PEVNESKTLLEKHVGEN------EDVNSVDFKGKWGIEKATEESKEEENLDGGYKQSLIP 173

Query: 175 SSYDELNRRAEDFIARVNRQRKLELSLLQHGSY 207
           SS  ELN+RA+DF+ARVNRQR+LELSLL + SY
Sbjct: 174 SSSYELNKRADDFVARVNRQRRLELSLLHYDSY 206