Miyakogusa Predicted Gene
- Lj4g3v2883290.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2883290.1 Non Chatacterized Hit- tr|I3SSW2|I3SSW2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,100,0,UBIQUITIN_2,Ubiquitin supergroup; Rad60-SLD_2,NULL;
UBIQUITIN-LIKE PROTEIN 3 (HCG-1 PROTEIN),NULL; U,CUFF.51891.1
(117 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g01320.4 222 6e-59
Glyma08g01320.3 222 6e-59
Glyma08g01320.2 222 6e-59
Glyma05g38330.1 196 7e-51
Glyma08g01320.1 191 1e-49
Glyma16g05740.1 182 6e-47
Glyma19g26760.1 179 7e-46
Glyma19g39470.1 117 4e-27
Glyma03g36830.2 111 1e-25
Glyma03g36830.1 111 1e-25
Glyma13g05940.4 107 2e-24
Glyma13g05940.3 107 2e-24
Glyma13g05940.2 107 2e-24
Glyma13g05940.1 107 2e-24
Glyma13g05940.5 103 3e-23
Glyma08g26430.1 103 4e-23
Glyma18g49950.1 103 6e-23
Glyma08g36230.1 50 8e-07
>Glyma08g01320.4
Length = 118
Score = 222 bits (566), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/118 (94%), Positives = 115/118 (97%), Gaps = 1/118 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQR+VSDWPKGKTV+PKSANEVKLISS
Sbjct: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILENNKTVGQCKVPFGET GGV IM VVVQPSLAK+KA+KKVDDSPKKVVCSCSIL
Sbjct: 61 GKILENNKTVGQCKVPFGETPGGVIIMLVVVQPSLAKTKADKKVDDSPKKVVCSCSIL 118
>Glyma08g01320.3
Length = 118
Score = 222 bits (566), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/118 (94%), Positives = 115/118 (97%), Gaps = 1/118 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQR+VSDWPKGKTV+PKSANEVKLISS
Sbjct: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILENNKTVGQCKVPFGET GGV IM VVVQPSLAK+KA+KKVDDSPKKVVCSCSIL
Sbjct: 61 GKILENNKTVGQCKVPFGETPGGVIIMLVVVQPSLAKTKADKKVDDSPKKVVCSCSIL 118
>Glyma08g01320.2
Length = 118
Score = 222 bits (566), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 111/118 (94%), Positives = 115/118 (97%), Gaps = 1/118 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQR+VSDWPKGKTV+PKSANEVKLISS
Sbjct: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILENNKTVGQCKVPFGET GGV IM VVVQPSLAK+KA+KKVDDSPKKVVCSCSIL
Sbjct: 61 GKILENNKTVGQCKVPFGETPGGVIIMLVVVQPSLAKTKADKKVDDSPKKVVCSCSIL 118
>Glyma05g38330.1
Length = 101
Score = 196 bits (497), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/100 (95%), Positives = 99/100 (99%), Gaps = 1/100 (1%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQR+VSDWPKGKTV+PKSANEVKLISS
Sbjct: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKA 99
GKILENNKTVGQCKVPFGETAGGV IMHVVVQPSL+K+KA
Sbjct: 61 GKILENNKTVGQCKVPFGETAGGVIIMHVVVQPSLSKTKA 100
>Glyma08g01320.1
Length = 124
Score = 191 bits (485), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 104/118 (88%), Gaps = 2/118 (1%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQR+VSDWPKGKTV+PKSANEVKLISS
Sbjct: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRIVSDWPKGKTVVPKSANEVKLISS 60
Query: 61 GKILENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILENNKTVGQCKVPFGET GGV IM VVVQPSLAK+KA + D K CS +L
Sbjct: 61 GKILENNKTVGQCKVPFGETPGGVIIMLVVVQPSLAKTKAVYRF-DCQAKYQCSLPLL 117
>Glyma16g05740.1
Length = 118
Score = 182 bits (463), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 84/118 (71%), Positives = 104/118 (88%), Gaps = 1/118 (0%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEE++V++KFRLYDGSDIGPFRYS A+T+ MLK R+ +DWPK K +IPK+AN++KLIS+
Sbjct: 1 MPEEEVVELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPKDKKIIPKAANDIKLISA 60
Query: 61 GKILENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILEN+KTVGQC+VPFGE GVI MHVVVQPSL K+K EKKVD+ P+K +C+CSIL
Sbjct: 61 GKILENHKTVGQCRVPFGELPKGVITMHVVVQPSLLKAKTEKKVDEVPRKHICACSIL 118
>Glyma19g26760.1
Length = 119
Score = 179 bits (453), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 104/119 (87%), Gaps = 2/119 (1%)
Query: 1 MPEEDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISS 60
MPEE+++++KFRLYDGSDIGPFRYS A+T+ MLK R+ +DWP+ K +IPK+AN++KLIS+
Sbjct: 1 MPEEEVLELKFRLYDGSDIGPFRYSPASTIAMLKDRIFADWPRDKKIIPKAANDIKLISA 60
Query: 61 GKILENNKTVGQCKVPFGETA-GGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
GKILENNKTVGQC+VPFGE GGVI MHVVVQPSL K+K EKKVD+ P+K C+CSIL
Sbjct: 61 GKILENNKTVGQCRVPFGELPKGGVITMHVVVQPSLLKTKTEKKVDEVPRKHKCACSIL 119
>Glyma19g39470.1
Length = 110
Score = 117 bits (292), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
E +++KFR+YDG+DI YSS+ TV LKQ++V++WP+GKTV PKS +++KLI +GK+
Sbjct: 5 EGCIELKFRIYDGTDIAHSTYSSSTTVGTLKQKLVAEWPQGKTVTPKSVSDLKLIHAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEK 101
LENNKT+ ++ FGE GGV+ MHVVVQP + K K +
Sbjct: 65 LENNKTLADYRITFGEIPGGVVTMHVVVQPPVTKKKQRR 103
>Glyma03g36830.2
Length = 119
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
E +++KFR+YDG+DI YSS+ TV LKQ++V++WP+GK V P S +++KLI +GK+
Sbjct: 5 EGRIELKFRIYDGTDIAHSTYSSSTTVGTLKQKLVAEWPQGKPVTPMSVSDLKLIHAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKT+ ++ FG+ G V+ MHVVVQP + K K EK +++ K CSC+IL
Sbjct: 65 LENNKTLADSRITFGDIPGDVVTMHVVVQPRVTKKKTEKNKENNQKMNSCSCTIL 119
>Glyma03g36830.1
Length = 119
Score = 111 bits (278), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/115 (49%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
E +++KFR+YDG+DI YSS+ TV LKQ++V++WP+GK V P S +++KLI +GK+
Sbjct: 5 EGRIELKFRIYDGTDIAHSTYSSSTTVGTLKQKLVAEWPQGKPVTPMSVSDLKLIHAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGVI-MHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKT+ ++ FG+ G V+ MHVVVQP + K K EK +++ K CSC+IL
Sbjct: 65 LENNKTLADSRITFGDIPGDVVTMHVVVQPRVTKKKTEKNKENNQKMNSCSCTIL 119
>Glyma13g05940.4
Length = 117
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DG+DIGP YS+A ++ LK+ V++ WPK K P++ ++KLIS+GK+
Sbjct: 5 QDQLEIKFRLSDGTDIGPKSYSAATSIVTLKESVLAQWPKDKEYGPRTVKDLKLISAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKTVG C+ P + GGV MHVVVQP + + KV K+ C C IL
Sbjct: 65 LENNKTVGDCQSPLCDLPGGVTTMHVVVQPPSVEE--DMKVASEAKQSKCVCVIL 117
>Glyma13g05940.3
Length = 117
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DG+DIGP YS+A ++ LK+ V++ WPK K P++ ++KLIS+GK+
Sbjct: 5 QDQLEIKFRLSDGTDIGPKSYSAATSIVTLKESVLAQWPKDKEYGPRTVKDLKLISAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKTVG C+ P + GGV MHVVVQP + + KV K+ C C IL
Sbjct: 65 LENNKTVGDCQSPLCDLPGGVTTMHVVVQPPSVEE--DMKVASEAKQSKCVCVIL 117
>Glyma13g05940.2
Length = 117
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DG+DIGP YS+A ++ LK+ V++ WPK K P++ ++KLIS+GK+
Sbjct: 5 QDQLEIKFRLSDGTDIGPKSYSAATSIVTLKESVLAQWPKDKEYGPRTVKDLKLISAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKTVG C+ P + GGV MHVVVQP + + KV K+ C C IL
Sbjct: 65 LENNKTVGDCQSPLCDLPGGVTTMHVVVQPPSVEE--DMKVASEAKQSKCVCVIL 117
>Glyma13g05940.1
Length = 117
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DG+DIGP YS+A ++ LK+ V++ WPK K P++ ++KLIS+GK+
Sbjct: 5 QDQLEIKFRLSDGTDIGPKSYSAATSIVTLKESVLAQWPKDKEYGPRTVKDLKLISAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQPSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENNKTVG C+ P + GGV MHVVVQP + + KV K+ C C IL
Sbjct: 65 LENNKTVGDCQSPLCDLPGGVTTMHVVVQPPSVEE--DMKVASEAKQSKCVCVIL 117
>Glyma13g05940.5
Length = 100
Score = 103 bits (258), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D ++IKFRL DG+DIGP YS+A ++ LK+ V++ WPK K P++ ++KLIS+GK+
Sbjct: 5 QDQLEIKFRLSDGTDIGPKSYSAATSIVTLKESVLAQWPKDKEYGPRTVKDLKLISAGKV 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQP 92
LENNKTVG C+ P + GGV MHVVVQP
Sbjct: 65 LENNKTVGDCQSPLCDLPGGVTTMHVVVQP 94
>Glyma08g26430.1
Length = 117
Score = 103 bits (257), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D +IKFRL DGSDIGP + +A ++ LK+ V++ WPK K PK+ +VKLIS+GKI
Sbjct: 5 QDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKDKENGPKTIKDVKLISAGKI 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQ-PSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENN+TVG+C+ P +T V MHVVVQ P+ K EKK + + C C IL
Sbjct: 65 LENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEK---EKKAANKATQNKCMCVIL 117
>Glyma18g49950.1
Length = 117
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 4 EDLVDIKFRLYDGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKI 63
+D +IKFRL DGSDIGP + +A ++ LK+ V++ WPKGK PK+ +VKLI++GKI
Sbjct: 5 QDQFEIKFRLTDGSDIGPKSFPAATSIATLKESVLAQWPKGKENGPKTIKDVKLINAGKI 64
Query: 64 LENNKTVGQCKVPFGETAGGV-IMHVVVQ-PSLAKSKAEKKVDDSPKKVVCSCSIL 117
LENN+TVG+C+ P +T V MHVVVQ P+ K KK + + C C IL
Sbjct: 65 LENNRTVGECQSPLCDTPDTVTTMHVVVQHPATEKG---KKAANKATQNKCMCVIL 117
>Glyma08g36230.1
Length = 87
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 13/79 (16%)
Query: 15 DGSDIGPFRYSSAATVDMLKQRVVSDWPKGKTVIPKSANEVKLISSGKILENNKTVGQCK 74
DG++IGP Y A ++ LK+ V S PK K P++ ++KLIS+G K
Sbjct: 1 DGTNIGPKSYFGATSIVTLKESVHSHRPKDKEYGPRTVKDLKLISAG------------K 48
Query: 75 VPFGETAGGV-IMHVVVQP 92
P + GGV MH+VVQP
Sbjct: 49 SPLCDLPGGVTTMHMVVQP 67