Miyakogusa Predicted Gene

Lj4g3v2882180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882180.1 Non Chatacterized Hit- tr|G7J3B7|G7J3B7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42.97,0.000000000001,seg,NULL; coiled-coil,NULL,CUFF.51823.1
         (356 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g38390.1                                                       152   4e-37
Glyma08g01270.1                                                       115   7e-26
Glyma04g37600.1                                                        54   3e-07

>Glyma05g38390.1 
          Length = 310

 Score =  152 bits (385), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/280 (42%), Positives = 142/280 (50%), Gaps = 65/280 (23%)

Query: 1   MGSGNSRLNATEGGGVLPPKVRSTLLNRFEEFRKRRNGGAGTISKKQLLKDAEETEDEHS 60
           MG GNS+ NA EG   LPPK+R  L++RFEEFRKRRNG   T+SKK LL +    ED++S
Sbjct: 1   MGIGNSKSNAAEGER-LPPKIRPMLVSRFEEFRKRRNGET-TLSKKNLLNE----EDDNS 54

Query: 61  QISHESETEDNKVLVLKETQPIKEETVVQVIATEKLSRVVPMPNPECEIEEQKDQVNQNT 120
           Q SH +E E+NKV   KE +P KEETV +VI  EKLSRVVP+PN ECE  E+        
Sbjct: 55  QSSHRTE-EENKVSSSKEIEPPKEETVERVITAEKLSRVVPVPNSECENVEE-------- 105

Query: 121 DSNKGKTEQVTDPNMVIIEHVNECIDQGVIIIDPKQGKLILXXXXXXXXXXXXXXXXDVK 180
                     T PN   IE V       +  +DP Q                        
Sbjct: 106 ----------THPNKDNIEQV-------IKYMDPSQDVF--------------------- 127

Query: 181 AEAEFKTGEGKIAEQAETEVKTEEGKIAEPVEEPRQEIXXXXXXX--XXXXXXXXXXXXX 238
                     +  E AE EVKTEE K AE VEE ++E                       
Sbjct: 128 ---------NRAVEMAEAEVKTEEEKTAELVEETKEEKKQKVDAKGDDHHEDSGDEDESE 178

Query: 239 XFGRFLCPGSPSFRIYYIEAEKRKDQEECKSPTIVMHHQK 278
             GRFLCPGSPSFRIY IEAEKR ++EEC  PTIV+   +
Sbjct: 179 KVGRFLCPGSPSFRIYCIEAEKR-NEEECNGPTIVLQKSR 217


>Glyma08g01270.1 
          Length = 294

 Score =  115 bits (288), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/146 (52%), Positives = 94/146 (64%), Gaps = 17/146 (11%)

Query: 1   MGSGNSRLNATEGGGVLPPKVRSTLLNRFEEFRKRRNGGAGTISKKQLLKDAEETEDEHS 60
           MG GNS+ NA EG G LP K+R  L++R+EEFRKRRN    T+SKK LL +    +D++S
Sbjct: 1   MGIGNSKSNAVEGEG-LPAKIRPMLVSRYEEFRKRRNRET-TLSKKNLLNE----KDDNS 54

Query: 61  QISHESETEDNKVLVLKETQPIKEETVVQVIATEKLSRVVPMPNPECEIEEQKDQVNQNT 120
           Q SH +ETED KV   KE +P KEETV +VI  EK+SRVVP+PN ECE  E+       T
Sbjct: 55  QSSHRTETED-KVSSSKEIEPPKEETVERVITAEKMSRVVPIPNSECENVEE-------T 106

Query: 121 DSNKGKTEQVT---DPNMVIIEHVNE 143
             NK K EQV    DPN  I+ H  E
Sbjct: 107 HPNKVKIEQVNKNMDPNQDILNHAVE 132



 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 23/135 (17%)

Query: 241 GRFLCPGSPSFRIYYIEAEKRKDQEECKSPTIVMHHQKXXXXXXXXXXXXXXXXXXXN-- 298
           GRFLCPGSPSFRIY  EAEKR ++EEC SP IV+ H+                    +  
Sbjct: 160 GRFLCPGSPSFRIYCNEAEKR-NEEECNSPAIVVLHKSRSADSVQTAESTNSNEVRCSQY 218

Query: 299 --------------DALEVLD-----VEIEPIAXXXXXXXXXXXXXXXXXXXXSCYYPMS 339
                         + L++ D     +E+EP +                    S Y+PM 
Sbjct: 219 FYYFISFPPIFCVQNCLQIEDDKKTLLELEPTS-KRKGHKKKFGAMRTLLKVKSLYHPMC 277

Query: 340 TCTGNDRAHLIAAKA 354
           TCTG+DR+ ++  KA
Sbjct: 278 TCTGDDRSLIVTTKA 292


>Glyma04g37600.1 
          Length = 215

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 6/68 (8%)

Query: 1  MGSGNSRLNATEGGGVLPPKVRSTLLNRFEEFRKRRNGGAGTISKKQLLKDAEETEDEHS 60
          MG  NSRLN   GG VLP ++R    NR+EE RKR++G  GT+ KK+LL +++  ++ +S
Sbjct: 1  MGGNNSRLNGN-GGEVLPARIR----NRWEELRKRKSGEDGTLLKKELL-NSDGVDEGNS 54

Query: 61 QISHESET 68
          Q S E+ T
Sbjct: 55 QSSEENGT 62