Miyakogusa Predicted Gene

Lj4g3v2882100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2882100.1 Non Chatacterized Hit- tr|K4ATG2|K4ATG2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,53.49,2e-19,
,CUFF.51815.1
         (91 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g01200.1                                                       130   4e-31
Glyma05g38470.1                                                       130   4e-31
Glyma04g37700.1                                                       124   3e-29

>Glyma08g01200.1 
          Length = 469

 Score =  130 bits (326), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 56/89 (62%), Positives = 71/89 (79%)

Query: 1   MTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCLRARAGRKFLSKQDRKTDYES 60
           MT RH+VS AMADYPQAPHS++V IPL M+LK ++ FDC+    G+ +LSKQ R+ DYES
Sbjct: 381 MTDRHLVSGAMADYPQAPHSNLVLIPLSMFLKALNFFDCVNVSTGKNYLSKQGRQIDYES 440

Query: 61  LAHGDLQEVRHMLAMVVFDTIYPLHLDRD 89
           LA GDL EVRH+ A +VFDT+YPLH ++D
Sbjct: 441 LARGDLLEVRHVFARIVFDTVYPLHPNKD 469


>Glyma05g38470.1 
          Length = 458

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 58/90 (64%), Positives = 70/90 (77%)

Query: 1   MTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCLRARAGRKFLSKQDRKTDYES 60
           M  RH VS AMADYPQAPHSD+V IP+ MYL+ ++ FDC+R  A + FLSKQ R+ DYES
Sbjct: 359 MKDRHFVSGAMADYPQAPHSDLVLIPIPMYLRALNFFDCVRVSASKNFLSKQGRQIDYES 418

Query: 61  LAHGDLQEVRHMLAMVVFDTIYPLHLDRDQ 90
           LA GDL EVRH+ A +VFDT+YPLH  +DQ
Sbjct: 419 LARGDLLEVRHVFARIVFDTVYPLHPGKDQ 448


>Glyma04g37700.1 
          Length = 458

 Score =  124 bits (310), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 55/91 (60%), Positives = 73/91 (80%)

Query: 1   MTTRHMVSQAMADYPQAPHSDMVFIPLGMYLKTVSIFDCLRARAGRKFLSKQDRKTDYES 60
           MT  + VSQAMADYPQAP S++VFIP+ +Y+K  ++FDC+R    +KFLSKQ RK DY+S
Sbjct: 358 MTNEYFVSQAMADYPQAPRSNLVFIPITLYVKVYNMFDCVRRSTVKKFLSKQHRKIDYQS 417

Query: 61  LAHGDLQEVRHMLAMVVFDTIYPLHLDRDQS 91
           LA G+LQEVRH+ A +VFDT+YPL  +++QS
Sbjct: 418 LALGNLQEVRHVFARIVFDTVYPLCPNQNQS 448