Miyakogusa Predicted Gene

Lj4g3v2871730.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2871730.2 Non Chatacterized Hit- tr|E1Z3R4|E1Z3R4_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,47.44,0.0000000006,no description,Rubredoxin-type fold;
Rubredoxin,Rubredoxin domain; seg,NULL; Rubredoxin-like,NULL;
R,CUFF.51796.2
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g33390.1                                                       201   4e-52
Glyma04g37940.1                                                       200   7e-52
Glyma08g00990.1                                                       179   1e-45
Glyma06g17130.1                                                       154   5e-38
Glyma01g44000.1                                                        54   6e-08
Glyma11g01470.1                                                        51   5e-07

>Glyma05g33390.1 
          Length = 194

 Score =  201 bits (510), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 106/139 (76%), Gaps = 2/139 (1%)

Query: 24  LRRSF-NPLALKSPFFSGSLNLYLHPNHQQLLTSVAPRISMRVASKQSYICRDCGYIYSD 82
           LRR   NP ALKS FFSGSLNLYLHPNH  L TS  PRISMRVASKQ+YICRDCGYIY D
Sbjct: 57  LRRPLMNPFALKSSFFSGSLNLYLHPNHHHL-TSAPPRISMRVASKQAYICRDCGYIYKD 115

Query: 83  RIPFEKLPDNYFCRVCGAPKRRFKPYAPPVTKNANDIDVRKARKAELQRDQAIGRALPXX 142
           R PFEKLPDNYFC VCGAPKRRF+ YAP VTKN ND  VRKARKAELQRD+AIG+A P  
Sbjct: 116 RTPFEKLPDNYFCPVCGAPKRRFRAYAPAVTKNDNDTAVRKARKAELQRDEAIGKAFPIA 175

Query: 143 XXXXXXXXXXXYFYLNSVY 161
                      YFYLNS Y
Sbjct: 176 IVVGIAVLAGLYFYLNSQY 194


>Glyma04g37940.1 
          Length = 165

 Score =  200 bits (508), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 117/166 (70%), Gaps = 6/166 (3%)

Query: 1   MALQMQSPXXXXXXX-----XXXXXXXGLRRSFNPLALKSPFFSGSLNLYLHPNHQQLLT 55
           MA+ MQ+P                   GLR   NPLALKS FFSGSLNL LHP  QQ LT
Sbjct: 1   MAMHMQAPTISLNTARSPSSLAPAANAGLRPHLNPLALKSSFFSGSLNLLLHP-MQQYLT 59

Query: 56  SVAPRISMRVASKQSYICRDCGYIYSDRIPFEKLPDNYFCRVCGAPKRRFKPYAPPVTKN 115
           S APRISMRVASKQ+YICRDCGYIY+DRIPFEKLPD +FC VCGAPKRRF+PYAP V +N
Sbjct: 60  SGAPRISMRVASKQAYICRDCGYIYNDRIPFEKLPDKFFCPVCGAPKRRFRPYAPTVARN 119

Query: 116 ANDIDVRKARKAELQRDQAIGRALPXXXXXXXXXXXXXYFYLNSVY 161
           AND DVRKARK+E+++++AIG ALP             YFYLN+ +
Sbjct: 120 ANDKDVRKARKSEIKKEEAIGNALPIAAAVGIAVLAGIYFYLNNKF 165


>Glyma08g00990.1 
          Length = 157

 Score =  179 bits (454), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 93/120 (77%), Gaps = 1/120 (0%)

Query: 42  LNLYLHPNHQQLLTSVAPRISMRVASKQSYICRDCGYIYSDRIPFEKLPDNYFCRVCGAP 101
           LN YLHPNH  L TS  PRISMRVASKQ+YICRDCGYIY DR PFEKLPDNYFC VCGAP
Sbjct: 39  LNFYLHPNHLHL-TSAPPRISMRVASKQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAP 97

Query: 102 KRRFKPYAPPVTKNANDIDVRKARKAELQRDQAIGRALPXXXXXXXXXXXXXYFYLNSVY 161
           KRRF+PYAP +TKN ND  VRKARKAELQRD+A+G+ALP             YFYLNS Y
Sbjct: 98  KRRFRPYAPAITKNDNDTAVRKARKAELQRDEAVGKALPIAIGVGIAVLAGLYFYLNSQY 157


>Glyma06g17130.1 
          Length = 166

 Score =  154 bits (388), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 83/141 (58%), Positives = 98/141 (69%), Gaps = 5/141 (3%)

Query: 23  GLRRSFNPLALKSPFFSGSLNLYLHPNHQQLLTSVAPRISMRVASKQSYICRDCGYIYSD 82
           GLR  FNPLALKS FFSGSLNL LHPN Q  LTS A RISMRVASKQ+YICRDCG   S 
Sbjct: 29  GLRPHFNPLALKSSFFSGSLNLLLHPNQQ--LTSGAARISMRVASKQAYICRDCGLASSR 86

Query: 83  RI--PFEKLPDNYFCRVCGAPKRRFKPYAPPVTKNANDIDVRKARKAELQRDQAIGRALP 140
            +  PF+K        +CGAPK RF+PYAP V +NAND DVRKARK+++++++AIG ALP
Sbjct: 87  LLSHPFKK-EIRVTELICGAPKGRFRPYAPAVARNANDKDVRKARKSKIKKEEAIGNALP 145

Query: 141 XXXXXXXXXXXXXYFYLNSVY 161
                        YFYLN+ +
Sbjct: 146 IAAALGIAVLVGLYFYLNNKF 166


>Glyma01g44000.1 
          Length = 274

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 59  PRISMRVASKQ----SYICRDCGYIYSDRIPFEKLPDNYFCRVCGAPKRRFKPY 108
           PR   ++   Q    ++IC DCGYIY+ + PF++ PD Y C  C APK+RF  Y
Sbjct: 184 PRFGRKLTETQKARATHICLDCGYIYTLQKPFDEQPDTYGCPQCQAPKKRFARY 237


>Glyma11g01470.1 
          Length = 274

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 59  PRISMRVASKQ----SYICRDCGYIYSDRIPFEKLPDNYFCRVCGAPKRRFKPY 108
           PR   ++   Q    ++IC DCGYIY+ +  F++ PD Y C  C APK+RF  Y
Sbjct: 184 PRFGRKLTETQKARATHICLDCGYIYTLQKSFDEQPDTYGCPQCQAPKKRFARY 237