Miyakogusa Predicted Gene

Lj4g3v2860640.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2860640.1 Non Chatacterized Hit- tr|D7M0L1|D7M0L1_ARALL
Putative uncharacterized protein OS=Arabidopsis lyrata,56.79,6e-18,
,CUFF.51787.1
         (257 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g00890.1                                                       437   e-123
Glyma05g33290.1                                                       114   1e-25

>Glyma08g00890.1 
          Length = 625

 Score =  437 bits (1123), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 208/257 (80%), Positives = 228/257 (88%)

Query: 1   MISNVLSERVLYSWEGRDIERRVIFVTSTLPEDVDSTMQKSLMDAADKCVSVDFALFQQK 60
           MISNVLSERVLYSW+G+DIER+VI +TSTLPED+DS +QKSLMDAADKCVSVDFA+FQQK
Sbjct: 106 MISNVLSERVLYSWQGKDIERKVIVITSTLPEDIDSIVQKSLMDAADKCVSVDFAVFQQK 165

Query: 61  SSHLTDSRENINTFRRCISHFDNCSVQTYIPDFRIFHGLVKRWLQILKDDMEEPFLARLI 120
           S HLTD+RENIN FRRCISH DNCSVQTYIPDFR+FH LVKRWL ILKDDMEEP LARLI
Sbjct: 166 SIHLTDTRENINNFRRCISHLDNCSVQTYIPDFRVFHSLVKRWLLILKDDMEEPLLARLI 225

Query: 121 FKDNLLGSVNQIFCNLFAPVYPITNSFSQCQTCRCHGIPLGQAEKKLNGISCPVTGCNLE 180
           FKDNL  SVN IFCNLFAPV PITN F+QC+TCRCHGIPLG AEK  + +SC VTGCNLE
Sbjct: 226 FKDNLFDSVNHIFCNLFAPVNPITNIFTQCRTCRCHGIPLGDAEKNFSRLSCSVTGCNLE 285

Query: 181 TCDVIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVV 240
           TCDV+ENSV++GEK ILFLPSF++SLK LQI+ PINI VTERINL SLDEGLI+GASFVV
Sbjct: 286 TCDVMENSVQLGEKNILFLPSFYNSLKPLQISLPINITVTERINLTSLDEGLIIGASFVV 345

Query: 241 TPSPNHVNETTSDDADQ 257
            PS  H  ETTSDD DQ
Sbjct: 346 IPSSYHPIETTSDDGDQ 362


>Glyma05g33290.1 
          Length = 330

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/74 (79%), Positives = 63/74 (85%)

Query: 184 VIENSVRVGEKTILFLPSFHDSLKLLQITSPININVTERINLASLDEGLIMGASFVVTPS 243
           VIENSVRVGEK ILFLPSF++SLKLLQI+  INI V ERIN ASLDEGLIMGASFVV PS
Sbjct: 23  VIENSVRVGEKIILFLPSFYNSLKLLQISLSINITVNERINSASLDEGLIMGASFVVIPS 82

Query: 244 PNHVNETTSDDADQ 257
             HV ET SDDA+Q
Sbjct: 83  SYHVIETISDDANQ 96