Miyakogusa Predicted Gene

Lj4g3v2826700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2826700.1 Non Chatacterized Hit- tr|I1KBM3|I1KBM3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6614
PE=,84.65,0,Snf7,Snf7; seg,NULL; SNF7 - RELATED,NULL;
coiled-coil,NULL,CUFF.51739.1
         (215 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g16240.1                                                       286   1e-77
Glyma04g38750.1                                                       285   3e-77

>Glyma06g16240.1 
          Length = 215

 Score =  286 bits (732), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 152/215 (70%), Positives = 164/215 (76%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPKVTDVD+AILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKVTDVDKAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELTSKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVDAWL+NVEQQLADIEL SKQKAVF+SLKAGNDAMKAIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDAWLINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIED 120

Query: 121 VQKLMDDTAEAKAYQDEINAVLGEQLSAXXXXXXXXXXXXXXXXLTVQDLPEVPTSVSED 180
           VQKLMDDTAEAKAYQDEIN ++GE+LSA                LTVQDLPEVP S +E+
Sbjct: 121 VQKLMDDTAEAKAYQDEINEIMGEKLSAEDEEEILAEFEDLEIQLTVQDLPEVPPSANEE 180

Query: 181 INEKLDLPEVPIQAPGEKVVEASSKRKVMEEPLPA 215
           I EKLDLP+VP +AP     E S+KRKVMEEPL A
Sbjct: 181 IEEKLDLPDVPTKAPVTSDAEVSTKRKVMEEPLAA 215


>Glyma04g38750.1 
          Length = 215

 Score =  285 bits (728), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 152/215 (70%), Positives = 163/215 (75%)

Query: 1   MGNIFVKKPKVTDVDRAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIRXXXXXXXXX 60
           MGN+FVKKPKVTDVD+AILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIR         
Sbjct: 1   MGNLFVKKPKVTDVDKAILALKTQRRKLAQYQQKLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 61  XXXXXXXXXXXXXQVDAWLLNVEQQLADIELTSKQKAVFDSLKAGNDAMKAIQSEINIED 120
                        QVDAWL+NVEQQLADIEL SKQKAVF+SLKAGNDAMKAIQSEINIED
Sbjct: 61  ALKKKKTQEELLKQVDAWLINVEQQLADIELASKQKAVFESLKAGNDAMKAIQSEINIED 120

Query: 121 VQKLMDDTAEAKAYQDEINAVLGEQLSAXXXXXXXXXXXXXXXXLTVQDLPEVPTSVSED 180
           VQKLMDDTAEAKAYQDEIN ++GE+LSA                LTVQDLPEVP SV E+
Sbjct: 121 VQKLMDDTAEAKAYQDEINEIMGEKLSAEDEEEILAEFEDLEIQLTVQDLPEVPPSVHEE 180

Query: 181 INEKLDLPEVPIQAPGEKVVEASSKRKVMEEPLPA 215
           I EKLDLP+VP +AP     E S+K KVMEEPL A
Sbjct: 181 IEEKLDLPDVPTKAPVTSDAEVSTKGKVMEEPLAA 215