Miyakogusa Predicted Gene

Lj4g3v2825530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2825530.1 tr|G7J2U3|G7J2U3_MEDTR U-box domain-containing
protein OS=Medicago truncatula GN=MTR_3g109100 PE=4
S,32.61,0.000000000004,coiled-coil,NULL; seg,NULL,CUFF.51725.1
         (228 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g08210.1                                                        71   1e-12
Glyma04g08140.1                                                        71   1e-12
Glyma19g02330.1                                                        63   2e-10
Glyma19g02340.1                                                        62   4e-10
Glyma13g45050.1                                                        57   2e-08
Glyma15g00280.1                                                        56   4e-08
Glyma05g36460.1                                                        55   7e-08
Glyma07g00340.1                                                        54   1e-07
Glyma17g28970.1                                                        54   2e-07
Glyma14g18380.1                                                        53   3e-07
Glyma08g03110.1                                                        52   4e-07
Glyma01g00490.1                                                        50   2e-06

>Glyma06g08210.1 
          Length = 805

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 68/114 (59%), Gaps = 13/114 (11%)

Query: 107 SLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQR---------- 156
           ++D ME E+ R KLE    MELY+ AC+E  ++  K +EL+ W L++E+R          
Sbjct: 372 AVDDMEAEMRRLKLELKQTMELYNTACKEAFTAQQKAVELKKWKLEEERRLEEARLAEET 431

Query: 157 -LKEAESENARCKTDIEV--AKRLVVQEMENKVLRAEMKAMIEADERKKVLDAL 207
            L  AE E A+ K  IE   A++ + Q    K L AEMKA+ E++E+KKVLDAL
Sbjct: 432 ALAVAEKERAKSKAAIEAAEAQKRIAQLEAQKRLTAEMKALRESEEKKKVLDAL 485


>Glyma04g08140.1 
          Length = 730

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/115 (42%), Positives = 69/115 (60%), Gaps = 15/115 (13%)

Query: 107 SLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQR---------- 156
           ++D ME E+ R KLE    MELY+ AC+E  ++  K +ELQ W L++E+R          
Sbjct: 315 AVDDMEAEMRRLKLELKQTMELYNTACKEAVTAQQKAVELQKWKLEEERRLEEARLAEET 374

Query: 157 -LKEAESENARCKTDIEVA---KRLVVQEMENKVLRAEMKAMIEADERKKVLDAL 207
            L  AE E A+ K  IE A   KR+   E + + L AEMKA+ E++E+KK+LDAL
Sbjct: 375 ALAIAEKERAKSKAAIEAAEAQKRIAELEAQKR-LNAEMKALRESEEKKKLLDAL 428


>Glyma19g02330.1 
          Length = 598

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 14/112 (12%)

Query: 109 DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE--------- 159
           ++ E ++ R KLE    ME+Y  ACR+  +S  K++EL  W L++E++++E         
Sbjct: 149 EAAEADMRRLKLELKQTMEMYSKACRQALASQQKLMELTHWRLEEEKKIQEARLDQEAAM 208

Query: 160 --AESENARCKTDIEV--AKRLVVQEMENKVLRAEMKAMIEADERKKVLDAL 207
             AE E ARC+  +E   A +   +E + +   AE+KA+ EA+E +K+LD L
Sbjct: 209 SIAEKEKARCRAVMETTEASKKSAEETQRRT-GAEVKALKEAEEIRKLLDNL 259


>Glyma19g02340.1 
          Length = 593

 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 14/112 (12%)

Query: 109 DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE--------- 159
           ++ E ++ R KLE    ME+Y  ACR+  +   K++EL  W L++E++++E         
Sbjct: 123 EAAEADMRRLKLELKQTMEMYSKACRQALAPQQKLMELTHWRLEEEKKIQEARLDQEAAM 182

Query: 160 --AESENARCKTDIEVAK--RLVVQEMENKVLRAEMKAMIEADERKKVLDAL 207
             AE E ARC+  +E A+  + + +E + +   AE+KA+ E +E +K+LD L
Sbjct: 183 AIAEKEKARCRAAMETAEASKKIAEETQRRA-GAEVKALKEVEEMRKLLDNL 233


>Glyma13g45050.1 
          Length = 775

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 75/142 (52%), Gaps = 25/142 (17%)

Query: 84  FSSSKTASVDTMNDFSCGEGPLFSLDS----MEDEVLRHKLEHNHAMELYHAACREVKSS 139
           F S++  ++++   FS      +SL S     E ++ R KL+    +++Y  ACR+  +S
Sbjct: 307 FGSTRLGALNSATSFS------YSLQSEDEAAEADMRRLKLQLKQTIKMYSTACRQALAS 360

Query: 140 NHKVIELQDWNLKQEQRLKE-----------AESENARCKTDIEVA---KRLVVQEMENK 185
             K++EL    L++E++++E           AE E ARC+  +E A   K++   E   +
Sbjct: 361 QQKLMELTHLRLEEEKKIQEARLAQEAAMAIAEKEKARCRVAMETAEASKKIAEVETHRR 420

Query: 186 VLRAEMKAMIEADERKKVLDAL 207
               E+KA+ E +E++K+LD L
Sbjct: 421 A-GVEVKALKEVEEKRKLLDNL 441


>Glyma15g00280.1 
          Length = 747

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 61/114 (53%), Gaps = 15/114 (13%)

Query: 111 MEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE----------- 159
           +E ++ R KLE    ME+Y  ACRE   S  K +EL    L++E+++ E           
Sbjct: 324 VEADMRRLKLELTQRMEMYSTACREAYISQQKFMELTHQRLEEEKKIDEARLAQEAAMAI 383

Query: 160 AESENARCKTDIEVA---KRLVVQEMENKVLRAEMKAMIEADERKKVLDALRQS 210
           AE E ARC+  +E A   K++   E   +    E+KA+ EA+E +K+L+ L Q+
Sbjct: 384 AEKEKARCRAAMETAEASKKIAEVETHRRA-SVEVKALKEAEEMRKLLENLAQT 436


>Glyma05g36460.1 
          Length = 726

 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 19/115 (16%)

Query: 109 DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE--------- 159
           D +E E+ R KLE    MELY +AC+E  ++  K +ELQ W ++++++L++         
Sbjct: 325 DEVEAEMRRLKLELKQTMELYSSACKEAMTAKQKALELQRWKVEEQRKLEDARLAEGTAL 384

Query: 160 --AESENARCKTDIEVAKRLVVQEMENKV--LRAEMKAMIEADERKKVLDALRQS 210
             AE E  +C   +E A      E   K+  L A+ +  +E+  +KK  D L  S
Sbjct: 385 AMAEREKVKCMAAMEAA------ETSRKIAELEAQKRMSVESAHKKKNADILSHS 433


>Glyma07g00340.1 
          Length = 706

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 13/127 (10%)

Query: 96  NDFSCGEGPLFSLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWN----- 150
            D S  E    S D  E ++   KLE  H +E+Y  ACRE  ++  K+ ELQ+W      
Sbjct: 272 TDISFSEDSRRSSDEAEADMRSLKLELKHTLEIYTTACRETLAAQQKLGELQNWKIEEEK 331

Query: 151 ------LKQEQRLKEAESENARCKTDIEVAK--RLVVQEMENKVLRAEMKAMIEADERKK 202
                 L QE      E E AR K   E AK  + + +   +K    ++KA+ EA+E +K
Sbjct: 332 KMEEMQLSQEAAEASVEQEKARSKAARETAKAAKRIARVESSKRESVKVKALKEAEEMRK 391

Query: 203 VLDALRQ 209
            LD L Q
Sbjct: 392 QLDNLTQ 398


>Glyma17g28970.1 
          Length = 624

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 15/126 (11%)

Query: 105 LFSLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQE---------- 154
           L  +D +E E+ R KLE    +ELY+ A +E  ++  K +ELQ W L++E          
Sbjct: 171 LRGVDDVEAEMRRLKLELKQTIELYNNAYKEALTAQQKAVELQRWKLEEERRLEEAKLAE 230

Query: 155 -QRLKEAESENARCKTDIEVAK-RLVVQEME-NKVLRAEMKAMIEADERKKVLDALRQSQ 211
              L  AE E AR K   E A+ +  + E+E  K + AEMKA  EA+E++K +DAL  S 
Sbjct: 231 EAALAVAEKEKARSKAATESAEAQQRIAELEAQKRINAEMKAFKEAEEKRKAVDAL--SN 288

Query: 212 NFIKYQ 217
           N ++Y+
Sbjct: 289 NHVRYR 294


>Glyma14g18380.1 
          Length = 754

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 75/144 (52%), Gaps = 26/144 (18%)

Query: 98  FSCGEGPLFSLDSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQE--- 154
           FS  +G    +D +E E+ R KLE N  ME Y  AC+E   +  K +ELQ W L++E   
Sbjct: 333 FSASQG----MDDVEAEMRRLKLELNQIMEKYSNACKEAFKAQQKAVELQRWKLEEERRL 388

Query: 155 --------QRLKEAESENARCKTDIEVAK-RLVVQEMEN-KVLRAEMKAMIEADERKKVL 204
                     L  AE E AR K  +E A+ +  + E+E+ K + AE KA +E++E++K +
Sbjct: 389 EEARLAEEAALAVAEKEKARSKAAMENAEVQQRIAELESQKRINAEKKAFMESEEKRKAV 448

Query: 205 DALRQSQNFIKYQTLFHSLIVLFL 228
           DA         YQT+   L  +FL
Sbjct: 449 DA---------YQTIILKLQQIFL 463


>Glyma08g03110.1 
          Length = 697

 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 19/113 (16%)

Query: 111 MEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKE----------- 159
           +E EV R KLE    ME+Y + C+E  ++  K +ELQ W ++++++L++           
Sbjct: 291 VEAEVRRLKLELKQTMEMYSSVCKEATTAKQKALELQRWKVEEQRKLEDTRLAEGTALAM 350

Query: 160 AESENARCKTDIEVAKRLVVQEMENKV--LRAEMKAMIEADERKKVLDALRQS 210
           AE E  +C   ++ A      E   K+  L A+ +  +E++ +KK +D L  S
Sbjct: 351 AEREKVKCMAAMKSA------ETSRKIAELEAQKRISVESEHKKKNVDILSHS 397


>Glyma01g00490.1 
          Length = 719

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 109 DSMEDEVLRHKLEHNHAMELYHAACREVKSSNHKVIELQDWNLKQEQRLKEAESENARCK 168
           D +E E+ R KLE    ME+Y + C+E  ++  K +ELQ W ++++++L+++ S ++   
Sbjct: 307 DDVEFEMRRLKLELKQTMEMYSSVCKEAMTAKQKAMELQRWKVEEQKKLEDS-SMSSSPG 365

Query: 169 TDIEVAKRLVVQEMENKVLRAEMKAMIEADERKK 202
             +  +  + + EME + +R E    I A E +K
Sbjct: 366 EAVTSSSSMALMEMEQEKIREEALQKIAALEAQK 399