Miyakogusa Predicted Gene

Lj4g3v2821280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2821280.1 Non Chatacterized Hit- tr|I3SMC1|I3SMC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.55,0,Galactose-binding domain-like,Galactose-binding
domain-like; no description,PITH domain; PITH,PITH d,CUFF.51721.1
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g29400.1                                                       391   e-109
Glyma15g09650.1                                                        57   1e-08
Glyma10g30350.1                                                        55   6e-08

>Glyma13g29400.1 
          Length = 204

 Score =  391 bits (1004), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/203 (90%), Positives = 195/203 (96%)

Query: 1   MSCLHDHSCEDHDCSTDWSLYKHIDLSKVSALNEATPGSVKSVFKAWEDRLNSSGGHLES 60
           M+CLHDHSCEDHDCS++WSLYKHIDLSKV+ALNEA PGSVKSVFKAWE+RL+SSG HLES
Sbjct: 1   MACLHDHSCEDHDCSSNWSLYKHIDLSKVTALNEANPGSVKSVFKAWEERLDSSGVHLES 60

Query: 61  NEGDPELLVFIPFTSDVKIKSISIVGGADGTSPSKMRAFINRDGIDFSDAQSMQAIQEWD 120
           NEGDPELLVFIPFTSDVKIKSISIVGGADGTSPSKMR FINR+GIDFSDAQSMQAIQEWD
Sbjct: 61  NEGDPELLVFIPFTSDVKIKSISIVGGADGTSPSKMRVFINREGIDFSDAQSMQAIQEWD 120

Query: 121 LAENMQGVLEYQTRYSIFQSVGHITLHFPESFGGDTTKIHYIGFKGEATQLKRDVVATIV 180
           L ENMQGVLEYQTRYS FQSV +ITLHFPE+FGGDTTKIHYIGFKGEATQLKRDVVATIV
Sbjct: 121 LVENMQGVLEYQTRYSKFQSVANITLHFPENFGGDTTKIHYIGFKGEATQLKRDVVATIV 180

Query: 181 YEITPNPSDHKTHAESGGGLSHV 203
           YE+ PNPSDHKT AESGGGLSH+
Sbjct: 181 YELMPNPSDHKTRAESGGGLSHI 203


>Glyma15g09650.1 
          Length = 28

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/28 (85%), Positives = 27/28 (96%)

Query: 1  MSCLHDHSCEDHDCSTDWSLYKHIDLSK 28
          M+CLHDHSCEDHDCS++W LYKHIDLSK
Sbjct: 1  MACLHDHSCEDHDCSSNWPLYKHIDLSK 28


>Glyma10g30350.1 
          Length = 176

 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 14/160 (8%)

Query: 20  LYKHIDLSKVSALNEATPGSVKSVFKAWEDRLNSSGGHLESNEGDPELLVFIPFTSDVKI 79
           L   ID S V  LN+++  S+ +  K  +      G HLES+  D +LL++IPFT  VK+
Sbjct: 16  LLDFIDWSGVECLNQSSTHSLPNAIK--QGYREDDGLHLESD-ADEQLLLYIPFTQVVKL 72

Query: 80  KSISIVGGADGTSPSKMRAFINRDGIDFSDAQSMQAIQEWDLA-ENMQG--VLEYQTRYS 136
            S  ++ G +   P  ++ F N++ + FS+          +L+ EN++G  VL    +Y 
Sbjct: 73  YSF-VIKGPEEEGPKTVKLFSNKEHMGFSNVNDFPPSDVANLSEENLKGKPVL---LKYV 128

Query: 137 IFQSVGHITLHFPES-FGGDTTKIHYIGFKG---EATQLK 172
            FQ+V  +T+   ++  G + TK+  I   G   E T +K
Sbjct: 129 KFQNVRSLTIFIEDNQSGSEITKVQKIVLHGTTVETTDMK 168