Miyakogusa Predicted Gene

Lj4g3v2819900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2819900.1 Non Chatacterized Hit- tr|D8RHF6|D8RHF6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,58.33,2e-16,seg,NULL; Ribonuclease H-like,Ribonuclease H-like
domain; no description,NULL; SUBFAMILY NOT NAMED,N,CUFF.51698.1
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g14710.1                                                       378   e-105
Glyma05g31480.1                                                       348   3e-96
Glyma05g00890.1                                                       273   1e-73
Glyma17g11030.1                                                       271   7e-73

>Glyma08g14710.1 
          Length = 229

 Score =  378 bits (970), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/235 (82%), Positives = 208/235 (88%), Gaps = 14/235 (5%)

Query: 15  PEIVFFDLETTVPRKVGQRFCVLEFGAMVVDPHKLSEIESFTTLIRPKDLTVVSVKSSRL 74
           PEIVFFDLETTVP+K G+RF VLEFGA+VV PHKL+EIES+TTLIRPKDL+VVSVKSSR 
Sbjct: 1   PEIVFFDLETTVPKKGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRS 60

Query: 75  EGITREAVKNAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIREAFDAINRPPPVPVGM 134
           +GITR+AV+NAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRI+EAFD INRP PVPVG+
Sbjct: 61  DGITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFDDINRPAPVPVGI 120

Query: 135 IDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKNCATVLFLESSL 194
           IDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLK+CATVLFLESSL
Sbjct: 121 IDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSL 180

Query: 195 PNTLHSKWHGSSSVMTRSRTNGKSPCKEETSRKSPPTSLAFQRTVPYTRGSLTKV 249
           PN LHSK HGS S              EETSRKSPP +L +QRTVPY RGSL KV
Sbjct: 181 PNMLHSKSHGSPS--------------EETSRKSPPATLGYQRTVPYARGSLGKV 221


>Glyma05g31480.1 
          Length = 227

 Score =  348 bits (894), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 181/235 (77%), Positives = 196/235 (83%), Gaps = 29/235 (12%)

Query: 16  EIVFFDLETTVPRKVGQRFCVLEFGAMVVDPHKLSEIESFTTLIRPKDLTVVSVKSSRLE 75
           EIVFFDLETTVP++ G+RF VLEFGA+VV PHKL+EIES+TTLIRPKDL+VVSVKSSR +
Sbjct: 2   EIVFFDLETTVPKRGGERFWVLEFGAIVVTPHKLTEIESYTTLIRPKDLSVVSVKSSRSD 61

Query: 76  GITREAVKNAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIREAFDAINRPPPVPVGMI 135
           GITR+AV+NAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRI+EAF+ INR  PVPVG+I
Sbjct: 62  GITRKAVENAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIKEAFNDINRSAPVPVGII 121

Query: 136 DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKNCATVLFLESSLP 195
           DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLK+CATVLFLESSLP
Sbjct: 122 DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKHCATVLFLESSLP 181

Query: 196 NTLHSKWHGSSSVMTRSRTNGKSPCKEETSRKSPPTSLAFQRTVPYTRGSLTKVT 250
           NTLHSKW+GSSS                             RTVPY RGSL K T
Sbjct: 182 NTLHSKWYGSSS-----------------------------RTVPYARGSLGKYT 207


>Glyma05g00890.1 
          Length = 501

 Score =  273 bits (699), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 128/210 (60%), Positives = 164/210 (78%)

Query: 12  QQAPEIVFFDLETTVPRKVGQRFCVLEFGAMVVDPHKLSEIESFTTLIRPKDLTVVSVKS 71
           ++  EIVFFD+ET+VP + GQ F +LEFGA++V P  L+E+  ++TL+RP +L+V++  S
Sbjct: 3   EERSEIVFFDVETSVPTRAGQGFALLEFGAILVCPRTLTELRDYSTLVRPANLSVITPLS 62

Query: 72  SRLEGITREAVKNAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIREAFDAINRPPPVP 131
            R  GI   AV  AP+F D+A  ++ +L+GR+WAGHNI RFDCVRIR+AF  IN+PPP P
Sbjct: 63  ERCNGINAAAVSAAPTFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEP 122

Query: 132 VGMIDSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKNCATVLFLE 191
            G IDSL +LT+KFGRRAG+MKMATLA+YFGLG+Q HRSLDDVRMNLEVLK CATVLFLE
Sbjct: 123 KGTIDSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLE 182

Query: 192 SSLPNTLHSKWHGSSSVMTRSRTNGKSPCK 221
           SSLP+   +    S +  TRSR+NGKSP +
Sbjct: 183 SSLPDIFTANSWVSPNATTRSRSNGKSPSQ 212


>Glyma17g11030.1 
          Length = 501

 Score =  271 bits (692), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 129/203 (63%), Positives = 162/203 (79%)

Query: 16  EIVFFDLETTVPRKVGQRFCVLEFGAMVVDPHKLSEIESFTTLIRPKDLTVVSVKSSRLE 75
           EIVFFD+ET+VP + GQ F +LEFGA++V P  L+E+ +++TL+RP +L+V+S  S R  
Sbjct: 7   EIVFFDVETSVPTRTGQGFALLEFGAILVCPKTLTELRNYSTLVRPANLSVISPLSERCN 66

Query: 76  GITREAVKNAPSFEDVADRIFSILNGRVWAGHNIQRFDCVRIREAFDAINRPPPVPVGMI 135
           GIT  AV  APSF D+A  ++ +L+GR+WAGHNI RFDCVRIR+AF  IN+PPP P G I
Sbjct: 67  GITAAAVSAAPSFADIAHLVYDLLHGRIWAGHNIIRFDCVRIRDAFAEINQPPPEPKGTI 126

Query: 136 DSLGVLTEKFGRRAGNMKMATLASYFGLGQQKHRSLDDVRMNLEVLKNCATVLFLESSLP 195
           DSL +LT+KFGRRAG+MKMATLA+YFGLG+Q HRSLDDVRMNLEVLK CATVLFLESSLP
Sbjct: 127 DSLVLLTQKFGRRAGDMKMATLATYFGLGRQTHRSLDDVRMNLEVLKYCATVLFLESSLP 186

Query: 196 NTLHSKWHGSSSVMTRSRTNGKS 218
           +   +    S + +TRSR+N KS
Sbjct: 187 DIFTANSWVSPNSITRSRSNEKS 209